Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0117501 Helianthus annuus HOM05D051063 ORTHO05D219861 0.0e+00 1104.4 550 100.0
HanXRQChr04g0117521 Helianthus annuus HOM05D051063 ORTHO05D219600 3.9e-275 951.0 550 88.4
HanXRQChr05g0149841 Helianthus annuus HOM05D000005 ORTHO05D000012 1.3e-15 89.0 188 29.8
Dinv26798 Davidia involucrata HOM05D001084 ORTHO05D001275 3.8e-12 77.4 349 25.2
Hma1.2p1_0652F.1_g195940 Hydrangea macrophylla HOM05D001084 ORTHO05D001275 2.7e-10 71.2 348 24.4
EL10Ac6g14896 Beta vulgaris HOM05D001084 ORTHO05D001275 1.0e-09 69.3 358 23.2
Dinv39946 Davidia involucrata HOM05D001084 ORTHO05D001275 1.8e-09 68.6 351 25.4
AUR62011358 Chenopodium quinoa HOM05D001084 ORTHO05D001275 3.9e-09 67.4 341 24.6
AUR62016703 Chenopodium quinoa HOM05D001084 ORTHO05D001275 5.1e-09 67.0 341 24.6
MD15G1269200 Malus domestica HOM05D001084 ORTHO05D001275 5.1e-09 67.0 349 24.1
Potri.004G150800 Populus trichocarpa HOM05D001084 ORTHO05D001275 6.7e-09 66.6 344 23.5
Sabra07G0027100 Salix brachista HOM05D001084 ORTHO05D001275 6.7e-09 66.6 351 23.9
Lj7C11T1 Lonicera japonica HOM05D001084 ORTHO05D001275 1.9e-08 65.1 354 26.0
AT4G34320 Arabidopsis thaliana HOM05D001084 ORTHO05D001275 2.5e-08 64.7 339 21.5
Potri.007G031200 Populus trichocarpa HOM05D001084 ORTHO05D001275 2.5e-08 64.7 351 23.9
Manes.15G148300 Manihot esculenta HOM05D001084 ORTHO05D001275 3.3e-08 64.3 340 23.5
CsaV3_2G014410 Cucumis sativus L. HOM05D001084 ORTHO05D001275 5.7e-08 63.5 394 20.1
CARHR242460 Cardamine hirsuta HOM05D001084 ORTHO05D001275 7.4e-08 63.2 347 22.2
Migut.O00626 Erythranthe guttata HOM05D001084 ORTHO05D001275 7.4e-08 63.2 327 23.2
Prupe.7G148500 Prunus persica HOM05D001084 ORTHO05D001275 7.4e-08 63.2 342 24.0
AL7G16950 Arabidopsis lyrata HOM05D001084 ORTHO05D001275 9.7e-08 62.8 339 21.5
Carub.0007s0604 Capsella rubella HOM05D001084 ORTHO05D001275 9.7e-08 62.8 339 21.8
MELO3C021948.2 Cucumis melo HOM05D001084 ORTHO05D001275 9.7e-08 62.8 348 20.1
ClCG09G017820 Citrullus lanatus HOM05D001084 ORTHO05D001275 1.3e-07 62.4 354 21.5
MD02G1154800 Malus domestica HOM05D001084 ORTHO05D001275 1.3e-07 62.4 303 23.8
Hma1.2p1_0939F.1_g239410 Hydrangea macrophylla HOM05D001084 ORTHO05D001275 2.2e-07 61.6 208 26.0
Sp7g32120 Schrenkiella parvula HOM05D001084 ORTHO05D001275 2.2e-07 61.6 358 21.8
Lj2g0019081 Lotus japonicus HOM05D001084 ORTHO05D001275 2.8e-07 61.2 319 23.5
Actinidia27911 Actinidia chinensis HOM05D001084 ORTHO05D001275 3.7e-07 60.8 207 26.1
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.7e-07 60.8 128 35.2
DCAR_007517 Daucus carota HOM05D001084 ORTHO05D001275 3.7e-07 60.8 310 23.2
Lsat_1_v5_gn_7_89780 Lactuca sativa HOM05D001084 ORTHO05D001275 3.7e-07 60.8 213 27.7
CANSAT25G0801 Cannabis sativa HOM05D001084 ORTHO05D001275 4.8e-07 60.5 343 23.6
AUR62008013 Chenopodium quinoa HOM05D001084 ORTHO05D001275 4.8e-07 60.5 221 26.2
QL11p042349 Quercus lobata HOM05D001084 ORTHO05D001275 4.8e-07 60.5 318 24.2
Cpa.g.sc62.111 Carica papaya HOM05D001084 ORTHO05D001275 6.3e-07 60.1 128 32.8
ATR0733G149 Amborella trichopoda HOM05D001084 ORTHO05D001275 8.2e-07 59.7 158 29.1
BcaB03g11840 Brassica carinata HOM05D001084 ORTHO05D001275 8.2e-07 59.7 340 21.5
C03p85890 Brassica napus HOM05D001084 ORTHO05D001275 8.2e-07 59.7 339 21.5
CSS0014022 Camellia sinensis var. sinensis HOM05D001084 ORTHO05D001275 8.2e-07 59.7 343 22.4
AUR62003196 Chenopodium quinoa HOM05D001084 ORTHO05D001275 8.2e-07 59.7 221 26.7
ClCG02G005280 Citrullus lanatus HOM05D001084 ORTHO05D001275 8.2e-07 59.7 342 20.8
ECA236G2604 Erigeron canadensis HOM05D001084 ORTHO05D001275 8.2e-07 59.7 323 24.8
A08p16940 Brassica napus HOM05D001084 ORTHO05D001275 1.1e-06 59.3 339 21.2
Gohir.A13G048400 Gossypium hirsutum HOM05D001084 ORTHO05D001275 1.1e-06 59.3 341 22.9
Nn5g29497 Nelumbo nucifera HOM05D001084 ORTHO05D001275 1.1e-06 59.3 233 25.3
Prupe.8G103100 Prunus persica HOM05D001084 ORTHO05D001275 1.1e-06 59.3 336 22.3
Ah.02g126440 Amaranthus hybridus HOM05D001084 ORTHO05D001275 1.4e-06 58.9 206 24.8
Cc02_g17880 Coffea canephora HOM05D001084 ORTHO05D001275 1.4e-06 58.9 354 22.6
Lalb_Chr17g0338191 Lupinus albus HOM05D001084 ORTHO05D001275 1.4e-06 58.9 360 23.9
MELO3C012570.2 Cucumis melo HOM05D001084 ORTHO05D001275 1.8e-06 58.5 342 20.8
CsaV3_7G023240 Cucumis sativus L. HOM05D001084 ORTHO05D001275 1.8e-06 58.5 342 20.5
Rhsim05G0076700 Rhododendron simsii HOM05D001084 ORTHO05D001275 2.4e-06 58.2 333 23.4
RcHm_v2.0_Chr6g0262961 Rosa chinensis HOM05D001084 ORTHO05D001275 2.4e-06 58.2 356 22.5
SalBow3G1146 Salvia bowleyana HOM05D001084 ORTHO05D001275 2.4e-06 58.2 343 22.2
CARHR109220 Cardamine hirsuta HOM05D001084 ORTHO05D001275 3.1e-06 57.8 366 21.6
COL.COLO4_32460 Corchorus olitorius HOM05D001084 ORTHO05D001275 3.1e-06 57.8 341 22.6
Dinv42091 Davidia involucrata HOM05D001084 ORTHO05D001275 3.1e-06 57.8 338 24.6
TPR.G28054 Trifolium pratense HOM05D001084 ORTHO05D001275 3.1e-06 57.8 338 20.4
arahy.Tifrunner.gnm1.ann1.850ERF Arachis hypogaea HOM05D001084 ORTHO05D001275 4.1e-06 57.4 155 29.0
EL10Ac9g21760 Beta vulgaris HOM05D001084 ORTHO05D001275 4.1e-06 57.4 330 23.9
A09p12010 Brassica napus HOM05D001084 ORTHO05D001275 4.1e-06 57.4 373 22.8
Manes.17G099100 Manihot esculenta HOM05D001084 ORTHO05D001275 4.1e-06 57.4 337 21.7
Oeu003715.1 Olea europaea HOM05D001084 ORTHO05D001275 4.1e-06 57.4 347 24.5
Rhsim08G0111500 Rhododendron simsii HOM05D001084 ORTHO05D001275 4.1e-06 57.4 349 22.1
arahy.Tifrunner.gnm1.ann1.NQI65D Arachis hypogaea HOM05D001084 ORTHO05D001275 5.3e-06 57.0 155 29.0
PSO700G0028 Papaver somniferum HOM05D001084 ORTHO05D001275 5.3e-06 57.0 299 22.4
Zm00001eb400920 Zea mays HOM05D001084 ORTHO05D001275 5.3e-06 57.0 172 27.9
Atru.chr5.2941 Acer truncatum HOM05D001084 ORTHO05D001275 6.9e-06 56.6 204 25.5
Carub.0003s3289 Capsella rubella HOM05D001084 ORTHO05D001275 6.9e-06 56.6 363 22.0
CAN.G322.110 Capsicum annuum HOM05D001084 ORTHO05D001275 6.9e-06 56.6 336 23.2
Duzib248G0731 Durio zibethinus HOM05D001084 ORTHO05D001275 6.9e-06 56.6 319 24.1
Glyma.02G059100 Glycine max HOM05D001084 ORTHO05D001275 6.9e-06 56.6 356 23.6
Glyma.07G161300 Glycine max HOM05D001084 ORTHO05D001275 6.9e-06 56.6 128 32.8
Glyma.16G141800 Glycine max HOM05D001084 ORTHO05D001275 6.9e-06 56.6 354 23.4
Oeu027314.1 Olea europaea HOM05D001084 ORTHO05D001275 6.9e-06 56.6 343 23.6
Sopen01g051570 Solanum pennellii HOM05D001084 ORTHO05D001275 6.9e-06 56.6 335 23.6
FvH4_2g08180 Fragaria vesca HOM05D001084 ORTHO05D001275 9.0e-06 56.2 356 21.9
FAN24G0963 Fragaria x ananassa HOM05D001084 ORTHO05D001275 9.0e-06 56.2 356 21.9
TAR376G0890 Trochodendron aralioides HOM05D001084 ORTHO05D001275 9.0e-06 56.2 380 22.6


User provided reference genes

Program Settings