Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 9.6e-105 383.6 213 100.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.0e-74 283.9 209 74.6
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 7.4e-73 277.7 209 71.3
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.9e-61 239.2 205 60.5
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 8.5e-53 211.1 205 57.6
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 3.6e-51 205.7 212 57.5
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 4.4e-49 198.7 213 56.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 7.5e-49 198.0 200 57.0
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 3.7e-48 195.7 209 54.5
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.8e-47 193.4 232 49.6
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 4.1e-47 192.2 209 52.6
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 2.7e-46 189.5 205 49.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 3.8e-45 185.7 209 53.1
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 5.0e-45 185.3 204 50.5
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.2e-43 180.6 219 48.9
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.7e-43 179.5 207 53.1
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 6.1e-43 178.3 207 51.2
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 1.2e-41 174.1 212 50.0
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 2.0e-41 173.3 212 49.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.4e-41 172.2 209 48.8
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 9.8e-41 171.0 202 50.0
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 4.8e-40 168.7 209 47.8
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 6.3e-40 168.3 207 45.9
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 6.3e-40 168.3 207 45.9
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.4e-39 167.2 207 47.3
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 2.4e-39 166.4 209 47.4
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 3.1e-39 166.0 201 46.8
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 9.1e-39 164.5 197 50.3
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 9.1e-39 164.5 202 50.0
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.6e-38 163.7 210 47.6
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 2.7e-38 162.9 201 49.3
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.0e-37 161.0 209 48.3
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 1.0e-37 161.0 209 46.9
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 1.0e-37 161.0 209 46.9
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 1.7e-37 160.2 210 45.7
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 5.5e-36 155.2 201 46.8
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 5.5e-36 155.2 196 46.9
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 7.2e-36 154.8 230 43.5
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.2e-35 154.1 205 45.4
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.2e-35 154.1 205 45.4
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 6.1e-35 151.8 217 45.6
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 2.0e-33 146.7 201 45.8
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 5.7e-33 145.2 199 46.7
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.7e-32 143.7 151 53.0
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 1.7e-32 143.7 201 44.8
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 2.8e-32 142.9 148 53.4
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 4.9e-32 142.1 150 52.7
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.1e-31 141.0 148 53.4
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.8e-31 140.2 219 43.4
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 3.1e-31 139.4 201 45.3
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 4.1e-31 139.0 153 51.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 9.2e-31 137.9 153 51.6
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 9.2e-31 137.9 200 41.0
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.2e-30 137.5 151 50.3
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.7e-30 136.3 209 43.1
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.5e-30 136.0 188 44.7
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 2.3e-29 133.3 152 50.0
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 3.8e-29 132.5 144 51.4
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.9e-28 130.2 209 42.6
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.5e-28 129.8 161 44.7
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.3e-28 129.0 144 49.3
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 5.6e-28 128.6 192 42.7
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 5.6e-28 128.6 147 49.7
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 1.6e-27 127.1 207 43.0
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.0e-26 122.5 201 42.8
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 5.2e-26 122.1 181 42.5
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.2e-25 120.9 201 42.8
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.5e-25 120.6 143 49.0
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.6e-25 119.8 208 39.4
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.5e-25 118.2 201 42.8
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 7.5e-25 118.2 103 62.1
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.2e-22 110.9 156 43.6
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 1.2e-22 110.9 119 55.5
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.2e-22 110.9 175 38.9
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.3e-21 107.5 145 43.4
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.7e-21 107.1 144 45.1
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 6.6e-21 105.1 127 44.9
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.2e-19 100.9 154 41.6
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.8e-18 97.1 108 50.0
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 8.9e-18 94.7 99 54.5
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 8.9e-18 94.7 165 38.8
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 7.5e-17 91.7 205 34.6
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 4.9e-16 89.0 143 39.2
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.4e-15 87.4 143 39.9
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.6e-14 84.0 151 39.7
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.7e-13 80.5 130 40.0
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.6e-13 78.6 119 41.2
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.1e-12 77.8 108 42.6
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.1e-11 73.6 89 46.1
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 3.6e-11 72.8 123 37.4
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.7e-11 72.4 83 43.4
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 1.1e-10 71.2 131 41.2
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.5e-09 67.4 74 47.3
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 2.2e-08 63.5 210 29.5
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 3.2e-07 59.7 117 30.8
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 2.1e-06 57.0 75 40.0
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 2.7e-06 56.6 67 44.8


User provided reference genes

Program Settings