Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.7e-70 269.2 134 100.0
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.8e-54 215.3 120 89.2
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 6.8e-40 167.5 117 73.5
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 9.2e-29 130.6 85 74.1
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 9.2e-29 130.6 87 74.7
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.2e-28 130.2 89 74.2
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.6e-28 129.8 85 76.5
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 3.5e-28 128.6 88 69.3
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.0e-28 127.9 85 72.9
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 6.0e-28 127.9 85 72.9
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.3e-27 126.7 84 72.6
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 1.3e-27 126.7 84 72.6
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.0e-27 125.6 118 59.3
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 5.0e-27 124.8 118 59.3
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 6.6e-27 124.4 85 72.9
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 6.6e-27 124.4 85 68.2
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-26 123.2 85 76.5
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-26 123.2 85 76.5
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.5e-26 123.2 87 73.6
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 1.5e-26 123.2 88 71.6
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.9e-26 122.9 87 73.6
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.9e-26 122.9 87 73.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.9e-26 122.9 119 57.1
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 3.3e-26 122.1 118 56.8
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 5.6e-26 121.3 85 70.6
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 5.6e-26 121.3 116 57.8
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 7.3e-26 120.9 111 56.8
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 7.3e-26 120.9 85 69.4
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 9.5e-26 120.6 87 67.8
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 9.5e-26 120.6 116 56.0
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.2e-25 120.2 85 67.1
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 1.2e-25 120.2 82 70.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 1.6e-25 119.8 115 60.9
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 2.1e-25 119.4 85 68.2
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 2.8e-25 119.0 113 60.2
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.8e-25 119.0 85 70.6
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 2.8e-25 119.0 71 76.1
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 2.8e-25 119.0 94 64.9
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 3.6e-25 118.6 87 65.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.6e-25 118.6 87 65.5
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 3.6e-25 118.6 120 55.0
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 4.7e-25 118.2 123 55.3
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 8.1e-25 117.5 139 51.8
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 8.1e-25 117.5 71 74.6
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 8.1e-25 117.5 84 67.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.1e-24 117.1 78 74.4
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.1e-24 117.1 78 74.4
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 1.1e-24 117.1 78 74.4
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.1e-24 117.1 100 58.0
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.4e-24 116.7 71 76.1
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.4e-24 116.7 85 68.2
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 1.4e-24 116.7 71 76.1
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.4e-24 116.7 71 76.1
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.4e-24 116.7 122 56.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.8e-24 116.3 81 66.7
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.8e-24 116.3 71 74.6
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 1.8e-24 116.3 71 74.6
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.8e-24 116.3 71 74.6
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 1.8e-24 116.3 84 65.5
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 1.8e-24 116.3 86 64.0
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 2.3e-24 115.9 78 73.1
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.3e-24 115.9 118 53.4
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.3e-24 115.9 118 53.4
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 2.3e-24 115.9 86 67.4
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 3.1e-24 115.5 81 64.2
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.0e-24 115.2 71 74.6
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 4.0e-24 115.2 125 51.2
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 4.0e-24 115.2 85 65.9
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 5.2e-24 114.8 78 71.8
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 5.2e-24 114.8 71 73.2
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 5.2e-24 114.8 106 58.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.2e-24 114.8 85 65.9
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 6.8e-24 114.4 85 64.7
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 6.8e-24 114.4 117 54.7
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 8.9e-24 114.0 113 56.6
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 8.9e-24 114.0 119 54.6
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 8.9e-24 114.0 124 51.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 8.9e-24 114.0 97 60.8
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.2e-23 113.6 70 72.9
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.2e-23 113.6 85 64.7
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.2e-23 113.6 118 52.5
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.5e-23 113.2 89 62.9
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.5e-23 113.2 124 51.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 1.5e-23 113.2 114 54.4
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.0e-23 112.8 85 64.7
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 2.6e-23 112.5 85 63.5
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.6e-23 112.5 68 76.5
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.6e-23 112.5 124 51.6
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 2.6e-23 112.5 86 65.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 7.5e-23 110.9 85 63.5
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 9.8e-23 110.5 114 53.5
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.3e-22 110.2 105 53.3
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 2.2e-22 109.4 121 52.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.2e-22 109.4 132 47.7
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 2.9e-22 109.0 71 69.0
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 2.9e-22 109.0 99 59.6
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.9e-22 109.0 115 54.8
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 2.9e-22 109.0 86 59.3
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 3.7e-22 108.6 105 54.3
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 6.4e-22 107.8 76 63.2
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 1.1e-21 107.1 69 66.7
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.9e-21 106.3 67 71.6
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 9.2e-21 104.0 107 57.9
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.7e-20 102.4 91 57.1
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.7e-20 102.4 69 66.7
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 6.0e-20 101.3 85 60.0
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 7.8e-20 100.9 85 58.8
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.1e-18 97.1 62 69.4
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.5e-18 96.7 56 80.4
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 3.3e-18 95.5 65 70.8
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.6e-17 93.2 135 45.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.1e-17 92.8 58 77.6
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 6.2e-17 91.3 57 75.4
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 1.4e-16 90.1 70 64.3
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 5.2e-16 88.2 83 57.8
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 4.4e-15 85.1 71 56.3
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 5.8e-15 84.7 97 52.6
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 2.2e-14 82.8 62 59.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.7e-14 82.0 62 64.5
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.9e-13 79.7 73 50.7
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 5.4e-13 78.2 82 52.4
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 3.9e-11 72.0 36 91.7
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 5.1e-11 71.6 47 70.2
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.6e-11 70.9 62 53.2
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.1e-10 70.5 56 57.1
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 1.9e-10 69.7 60 58.3
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 1.2e-09 67.0 42 76.2
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.2e-09 67.0 58 48.3
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.4e-08 63.5 85 36.5
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 6.8e-08 61.2 80 42.5


User provided reference genes

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