Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 7.2e-231 803.5 393 100.0
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 1.4e-173 613.2 392 75.5
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.1e-145 519.6 363 71.9
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.3e-115 420.6 399 52.9
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 4.2e-114 415.6 431 49.7
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 3.6e-113 412.5 455 49.2
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 1.0e-112 411.0 415 50.4
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.8e-112 410.2 395 50.4
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.9e-111 406.8 417 51.6
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 5.7e-111 405.2 407 50.1
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 7.4e-111 404.8 426 49.1
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 2.8e-110 402.9 432 48.6
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 3.7e-110 402.5 407 49.6
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 3.7e-110 402.5 408 51.7
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 8.2e-110 401.4 397 52.1
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.8e-109 400.2 424 49.1
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 5.3e-109 398.7 401 50.4
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.5e-108 397.1 430 48.6
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 2.0e-108 396.7 423 49.4
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 5.9e-108 395.2 398 50.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.0e-107 394.4 422 48.8
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 2.2e-107 393.3 423 49.2
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 2.2e-107 393.3 432 49.5
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 2.9e-107 392.9 420 51.7
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 6.5e-107 391.7 426 47.4
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 3.6e-105 386.0 423 51.1
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.6e-105 385.6 421 48.2
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 4.6e-105 385.6 435 47.1
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.0e-104 384.4 433 47.3
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 3.0e-104 382.9 410 48.3
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 6.7e-104 381.7 425 46.1
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 8.8e-104 381.3 426 46.2
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 2.0e-103 380.2 414 49.3
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 5.7e-103 378.6 423 46.8
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 1.3e-102 377.5 427 47.5
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 2.2e-102 376.7 434 46.3
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 4.8e-102 375.6 430 44.9
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 1.1e-101 374.4 460 44.8
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.2e-100 370.9 384 51.8
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 5.9e-100 368.6 424 46.9
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 1.0e-99 367.9 428 47.0
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 5.5e-98 362.1 429 46.6
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 9.4e-98 361.3 425 47.1
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 9.4e-98 361.3 428 45.6
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 1.2e-97 360.9 427 45.9
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 1.8e-96 357.1 427 45.4
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 3.5e-92 342.8 403 46.9
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.3e-91 340.9 347 47.8
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.2e-90 335.1 503 40.0
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 7.2e-90 335.1 430 43.3
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 5.2e-88 328.9 392 44.4
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 2.6e-87 326.6 394 45.9
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 3.7e-86 322.8 384 45.8
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 1.1e-85 321.2 402 43.8
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.5e-82 310.8 310 50.6
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 3.6e-81 306.2 448 40.8
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.7e-78 297.4 355 44.8
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 2.2e-78 297.0 424 40.8
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 1.8e-77 293.9 368 43.2
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 2.4e-77 293.5 421 41.6
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 5.9e-76 288.9 374 42.0
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 3.8e-75 286.2 452 38.3
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 8.8e-72 275.0 366 41.5
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 5.6e-66 255.8 342 42.1
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.2e-63 248.1 419 39.9
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 9.5e-58 228.4 266 47.0
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 9.5e-58 228.4 414 34.8
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 9.5e-58 228.4 333 39.6
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 6.2e-57 225.7 271 43.2
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 6.4e-54 215.7 209 50.2
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 2.9e-46 190.3 259 37.8
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 2.9e-46 190.3 204 46.6
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.1e-45 186.4 207 47.8
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.6e-36 157.9 150 54.0
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 4.0e-32 143.3 234 34.2
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 5.4e-29 132.9 314 31.5
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 9.0e-24 115.5 82 63.4
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 4.6e-20 103.2 77 58.4
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 6.0e-20 102.8 87 59.8
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 3.3e-18 97.1 162 38.9
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.4e-15 87.0 129 39.5
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.7e-14 84.7 180 29.4
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 1.7e-14 84.7 181 29.3
Lsat_1_v5_gn_1_21640 Lactuca sativa HOM05D001068 ORTHO05D002190 1.6e-12 78.2 55 65.5
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 6.9e-08 62.8 37 73.0


User provided reference genes

Program Settings