Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 1.5e-217 759.2 380 100.0
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 9.6e-132 474.2 289 85.1
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.4e-93 347.4 291 63.2
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 1.5e-71 274.2 288 52.1
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 3.6e-70 269.6 292 52.1
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 8.0e-70 268.5 292 52.4
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 1.0e-69 268.1 301 48.8
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 4.0e-69 266.2 294 52.0
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 4.0e-69 266.2 289 50.5
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 5.2e-69 265.8 295 51.2
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.4e-66 257.7 288 49.7
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 9.2e-66 255.0 345 44.6
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 3.9e-64 249.6 307 46.3
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 5.0e-64 249.2 289 46.4
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 6.6e-64 248.8 291 47.8
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 2.5e-63 246.9 291 48.5
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 4.3e-63 246.1 294 46.6
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 2.8e-62 243.4 293 45.7
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 2.8e-62 243.4 293 44.0
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 1.4e-61 241.1 290 46.2
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 2.3e-61 240.4 289 44.6
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 4.0e-61 239.6 294 49.7
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 6.8e-61 238.8 264 49.6
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 8.9e-61 238.4 287 46.0
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.2e-60 238.0 290 45.5
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 2.0e-60 237.3 302 45.7
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 3.4e-60 236.5 297 44.4
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 7.5e-60 235.3 299 45.8
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 9.8e-60 235.0 292 42.5
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 1.3e-59 234.6 307 43.6
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 2.2e-59 233.8 301 44.2
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 2.9e-59 233.4 332 41.0
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.7e-59 233.0 301 43.2
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 4.9e-59 232.6 300 42.7
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 4.9e-59 232.6 289 44.6
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.9e-59 232.6 289 45.0
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 6.4e-59 232.3 304 43.1
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 6.4e-59 232.3 284 44.0
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 8.3e-59 231.9 288 45.1
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 1.4e-58 231.1 289 45.0
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 1.4e-58 231.1 292 43.2
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.4e-58 230.3 289 43.9
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 5.4e-58 229.2 292 41.4
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 7.0e-58 228.8 292 42.5
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 9.2e-58 228.4 289 44.3
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 1.6e-57 227.6 301 41.9
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 3.5e-57 226.5 299 43.8
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 4.6e-57 226.1 301 43.2
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 6.0e-57 225.7 299 41.8
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 2.3e-56 223.8 308 40.9
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.0e-56 223.4 300 42.3
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 3.9e-56 223.0 307 41.7
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 5.0e-56 222.6 282 44.7
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 6.6e-56 222.2 297 45.1
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 8.6e-56 221.9 361 37.1
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.1e-55 221.5 368 39.9
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 2.5e-55 220.3 294 44.6
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.3e-55 219.9 297 42.4
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 4.3e-55 219.5 280 43.9
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 9.5e-55 218.4 300 39.7
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 9.5e-55 218.4 300 42.3
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 1.2e-54 218.0 330 40.6
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 1.6e-54 217.6 276 43.8
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 2.1e-54 217.2 280 43.6
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 2.8e-54 216.9 280 45.0
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 4.7e-54 216.1 298 39.6
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 6.2e-54 215.7 292 42.1
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 8.0e-54 215.3 290 40.0
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 8.0e-54 215.3 290 43.4
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 1.4e-53 214.5 297 40.4
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 1.8e-53 214.2 287 42.5
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.1e-53 213.4 284 43.7
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 5.2e-53 212.6 338 39.3
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 2.0e-52 210.7 287 42.9
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 2.6e-52 210.3 287 40.8
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 5.8e-52 209.1 292 39.7
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 9.8e-52 208.4 294 43.2
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 2.9e-51 206.8 335 37.9
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 3.2e-50 203.4 291 38.8
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 2.7e-49 200.3 287 39.4
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 1.1e-47 194.9 297 37.7
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 1.1e-47 194.9 287 37.3
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 1.9e-47 194.1 291 37.8
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 4.3e-47 193.0 287 36.6
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 7.3e-47 192.2 283 38.5
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.1e-46 190.7 284 38.4
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 2.8e-46 190.3 299 39.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 3.6e-46 189.9 278 42.8
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 6.2e-46 189.1 278 37.4
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 1.1e-45 188.3 285 38.6
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 2.3e-45 187.2 281 38.8
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 8.9e-45 185.3 301 38.2
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 1.9e-42 177.6 322 34.8
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 9.2e-42 175.3 275 39.6
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 6.6e-40 169.1 323 33.7
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 1.5e-39 167.9 320 33.8
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 8.1e-38 162.2 182 43.4
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.1e-37 161.8 190 41.6
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-36 156.8 182 42.3
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 2.9e-35 153.7 285 35.1
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 3.5e-33 146.7 151 47.0
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 9.9e-28 128.6 326 30.7
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 2.9e-27 127.1 128 49.2
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 1.1e-26 125.2 285 31.6
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 4.2e-26 123.2 188 41.5
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 4.3e-23 113.2 303 29.0
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 3.1e-21 107.1 102 55.9
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 2.4e-18 97.4 103 54.4
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 3.5e-17 93.6 240 27.5
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 1.3e-16 91.7 111 44.1
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 3.9e-16 90.1 141 34.0
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 3.9e-16 90.1 312 24.0
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 2.9e-11 73.9 281 25.6
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 6.5e-11 72.8 85 40.0
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 4.6e-09 66.6 91 39.6


User provided reference genes

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