Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0110541 Helianthus annuus HOM05D007215 ORTHO05D009019 7.9e-112 407.1 208 100.0
Glyma.02G137900 Glycine max HOM05D007215 ORTHO05D009019 5.4e-52 208.4 196 61.2
HanXRQChr10g0285991 Helianthus annuus HOM05D007215 ORTHO05D009019 1.7e-50 203.4 207 58.9
VMungo0251G1340 Vigna mungo HOM05D007215 ORTHO05D009019 5.0e-50 201.8 192 60.4
Glyma.07G207400 Glycine max HOM05D007215 ORTHO05D009019 1.5e-49 200.3 194 58.8
Phvul.003G297000 Phaseolus vulgaris HOM05D007215 ORTHO05D009019 1.9e-49 199.9 205 57.6
MSTRG.9732 Avicennia marina HOM05D007215 ORTHO05D009019 7.3e-49 198.0 195 59.5
EL10Ac3g06096 Beta vulgaris HOM05D007215 ORTHO05D009019 7.3e-49 198.0 195 61.0
QL10p055936 Quercus lobata HOM05D007215 ORTHO05D009019 5.2e-47 191.8 189 59.3
Atru.chr4.1429 Acer truncatum HOM05D007215 ORTHO05D009019 1.5e-46 190.3 209 55.5
Gorai.011G135400 Gossypium raimondii HOM05D007215 ORTHO05D009019 3.4e-46 189.1 210 57.1
Dinv33208 Davidia involucrata HOM05D007215 ORTHO05D009019 5.8e-46 188.3 188 60.6
Gohir.A10G144100 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.7e-45 186.8 210 56.7
Cfa015271 Carpinus fangiana HOM05D007215 ORTHO05D009019 2.2e-45 186.4 186 59.7
Cc03_g14170 Coffea canephora HOM05D007215 ORTHO05D009019 6.4e-45 184.9 193 59.1
Medtr4g087380 Medicago truncatula HOM05D007215 ORTHO05D009019 1.9e-44 183.3 197 56.3
ClCG06G001110 Citrullus lanatus HOM05D007215 ORTHO05D009019 9.2e-44 181.0 197 56.3
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla HOM05D007215 ORTHO05D009019 9.2e-44 181.0 137 72.3
FAN17G2642 Fragaria x ananassa HOM05D007215 ORTHO05D009019 1.2e-43 180.6 207 54.1
Psat7g121080 Pisum sativum HOM05D007215 ORTHO05D009019 1.6e-43 180.3 200 55.0
Sed0003072 Sechium edule HOM05D007215 ORTHO05D009019 1.6e-43 180.3 205 52.2
DCAR_027521 Daucus carota HOM05D007215 ORTHO05D009019 2.7e-43 179.5 137 69.3
Lalb_Chr05g0218881 Lupinus albus HOM05D007215 ORTHO05D009019 2.7e-43 179.5 195 55.4
RcHm_v2.0_Chr4g0405921 Rosa chinensis HOM05D007215 ORTHO05D009019 4.6e-43 178.7 191 55.5
Lj6P222T10 Lonicera japonica HOM05D007215 ORTHO05D009019 6.0e-43 178.3 157 61.1
Potri.019G112300 Populus trichocarpa HOM05D007215 ORTHO05D009019 7.8e-43 177.9 205 53.2
FvH4_4g10370 Fragaria vesca HOM05D007215 ORTHO05D009019 1.0e-42 177.6 208 52.9
THA.LOC104804037 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 1.7e-42 176.8 188 59.6
Lju470C16T0 Lonicera japonica HOM05D007215 ORTHO05D009019 3.0e-42 176.0 175 61.1
MSTRG.4303 Avicennia marina HOM05D007215 ORTHO05D009019 3.9e-42 175.6 191 55.0
Lalb_Chr09g0328091 Lupinus albus HOM05D007215 ORTHO05D009019 3.9e-42 175.6 195 54.4
CSS0011584 Camellia sinensis var. sinensis HOM05D007215 ORTHO05D009019 5.1e-42 175.3 160 61.9
Sc25g0002820 Simmondsia chinensis HOM05D007215 ORTHO05D009019 3.3e-41 172.6 193 53.4
Ah.07g202820 Amaranthus hybridus HOM05D007215 ORTHO05D009019 5.6e-41 171.8 141 68.1
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 5.6e-41 171.8 203 53.2
Lsat_1_v5_gn_5_190641 Lactuca sativa HOM05D007215 ORTHO05D009019 7.3e-41 171.4 184 58.2
Manes.11G128800 Manihot esculenta HOM05D007215 ORTHO05D009019 9.5e-41 171.0 141 66.7
Peaxi162Scf00483g00061 Petunia axillaris HOM05D007215 ORTHO05D009019 2.8e-40 169.5 185 58.4
Haze_01356 Corylus avellana HOM05D007215 ORTHO05D009019 6.2e-40 168.3 138 65.9
A09p52000 Brassica napus HOM05D007215 ORTHO05D009019 1.1e-39 167.5 206 55.3
C08p34680 Brassica napus HOM05D007215 ORTHO05D009019 2.3e-39 166.4 206 54.9
Peaxi162Scf00180g00003 Petunia axillaris HOM05D007215 ORTHO05D009019 2.3e-39 166.4 133 67.7
BraA09t40633Z Brassica rapa HOM05D007215 ORTHO05D009019 3.1e-39 166.0 205 55.1
Prupe.1G207500 Prunus persica HOM05D007215 ORTHO05D009019 6.8e-39 164.9 220 51.8
SGA_v2.0_scaffold12G06193 Striga asiatica HOM05D007215 ORTHO05D009019 8.9e-39 164.5 170 57.6
Cpa.g.sc9.370 Carica papaya HOM05D007215 ORTHO05D009019 1.2e-38 164.1 142 62.7
Duzib268G1282 Durio zibethinus HOM05D007215 ORTHO05D009019 1.2e-38 164.1 206 49.5
TAR362G0943 Trochodendron aralioides HOM05D007215 ORTHO05D009019 2.6e-38 162.9 184 56.5
Duzib151G0080 Durio zibethinus HOM05D007215 ORTHO05D009019 9.9e-38 161.0 135 64.4
AUR62023787 Chenopodium quinoa HOM05D007215 ORTHO05D009019 1.3e-37 160.6 141 65.2
ECA238G1604 Erigeron canadensis HOM05D007215 ORTHO05D009019 4.9e-37 158.7 170 55.9
AT3G59680 Arabidopsis thaliana HOM05D007215 ORTHO05D009019 8.3e-37 157.9 211 51.7
Sabra19G0108300 Salix brachista HOM05D007215 ORTHO05D009019 8.3e-37 157.9 196 52.6
BcaC07g40499 Brassica carinata HOM05D007215 ORTHO05D009019 1.9e-36 156.8 184 55.4
BolC8t51070H Brassica oleracea HOM05D007215 ORTHO05D009019 1.9e-36 156.8 184 55.4
AUR62002398 Chenopodium quinoa HOM05D007215 ORTHO05D009019 2.4e-36 156.4 141 63.8
FAN22G1962 Fragaria x ananassa HOM05D007215 ORTHO05D009019 7.1e-36 154.8 177 53.7
Oeu015716.1 Olea europaea HOM05D007215 ORTHO05D009019 7.1e-36 154.8 162 58.0
COL.COLO4_00135 Corchorus olitorius HOM05D007215 ORTHO05D009019 2.7e-35 152.9 136 62.5
CiPaw.02G100200 Carya illinoinensis HOM05D007215 ORTHO05D009019 4.6e-35 152.1 202 51.5
Carub.0005s2640 Capsella rubella HOM05D007215 ORTHO05D009019 6.0e-35 151.8 194 55.2
Migut.G01175 Erythranthe guttata HOM05D007215 ORTHO05D009019 6.0e-35 151.8 204 50.5
Thecc.04G165300 Theobroma cacao HOM05D007215 ORTHO05D009019 6.0e-35 151.8 207 48.8
Thhalv10006255m.g Eutrema salsugineum HOM05D007215 ORTHO05D009019 1.0e-34 151.0 180 56.1
Nn1g09545 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.3e-34 150.6 186 52.2
Oeu016616.1 Olea europaea HOM05D007215 ORTHO05D009019 1.3e-34 150.6 139 60.4
Oeu016617.1 Olea europaea HOM05D007215 ORTHO05D009019 1.3e-34 150.6 139 60.4
AL5G41750 Arabidopsis lyrata HOM05D007215 ORTHO05D009019 5.1e-34 148.7 187 52.4
Nn7g37543 Nelumbo nucifera HOM05D007215 ORTHO05D009019 1.5e-33 147.1 186 52.7
MD04G1049300 Malus domestica HOM05D007215 ORTHO05D009019 2.5e-33 146.4 253 42.3
CiPaw.01G170200 Carya illinoinensis HOM05D007215 ORTHO05D009019 7.3e-33 144.8 208 47.1
Lj4g0027849 Lotus japonicus HOM05D007215 ORTHO05D009019 1.2e-32 144.1 198 49.0
Aa31LG10G13970 Aethionema arabicum HOM05D007215 ORTHO05D009019 1.6e-32 143.7 134 63.4
Aqoxy2G03930 Aquilegia oxysepala HOM05D007215 ORTHO05D009019 1.6e-32 143.7 135 57.8
HPP92_023723 Vanilla planifolia HOM05D007215 ORTHO05D009019 1.6e-32 143.7 129 63.6
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea HOM05D007215 ORTHO05D009019 3.6e-32 142.5 202 46.5
CAN.G136.10 Capsicum annuum HOM05D007215 ORTHO05D009019 3.1e-31 139.4 195 49.7
Ciclev10022275m.g Citrus clementina HOM05D007215 ORTHO05D009019 3.1e-31 139.4 207 46.9
Solyc06g053440.3 Solanum lycopersicum HOM05D007215 ORTHO05D009019 4.0e-31 139.0 197 48.2
MBI11_g16037_MAGBIO Magnolia biondii HOM05D007215 ORTHO05D009019 6.8e-31 138.3 186 50.5
ATR0743G235 Amborella trichopoda HOM05D007215 ORTHO05D009019 1.2e-30 137.5 138 59.4
TAR633G2258 Trochodendron aralioides HOM05D007215 ORTHO05D009019 5.8e-30 135.2 172 50.0
CARHR170050 Cardamine hirsuta HOM05D007215 ORTHO05D009019 9.9e-30 134.4 178 51.1
Eucgr.L00006 Eucalyptus grandis HOM05D007215 ORTHO05D009019 9.9e-30 134.4 187 46.5
TWI38G1882 Tripterygium wilfordii HOM05D007215 ORTHO05D009019 3.8e-29 132.5 206 48.1
SalBow6G6024 Salvia bowleyana HOM05D007215 ORTHO05D009019 1.9e-28 130.2 172 51.2
Rhsim09G0009600 Rhododendron simsii HOM05D007215 ORTHO05D009019 9.2e-28 127.9 165 50.3
PSO017G6467 Papaver somniferum HOM05D007215 ORTHO05D009019 3.5e-27 125.9 226 43.4
TAR633G0862 Trochodendron aralioides HOM05D007215 ORTHO05D009019 7.8e-27 124.8 129 55.8
THA.LOC104816280 Tarenaya hassleriana HOM05D007215 ORTHO05D009019 3.9e-26 122.5 180 47.8
CANSAT56G1068 Cannabis sativa HOM05D007215 ORTHO05D009019 1.1e-25 120.9 243 40.3
CDE09G0824 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 4.3e-25 119.0 183 45.4
Sp5g03500 Schrenkiella parvula HOM05D007215 ORTHO05D009019 1.6e-24 117.1 203 45.3
Sopen06g018520 Solanum pennellii HOM05D007215 ORTHO05D009019 2.1e-24 116.7 167 49.1
Oeu021574.1 Olea europaea HOM05D007215 ORTHO05D009019 4.7e-24 115.5 161 46.0
PGSC0003DMG402016333 Solanum tuberosum HOM05D007215 ORTHO05D009019 4.7e-24 115.5 167 47.3
GSVIVG01038146001 Vitis vinifera HOM05D007215 ORTHO05D009019 9.0e-23 111.3 130 53.8
CDE02G0746 Ceratophyllum demersum HOM05D007215 ORTHO05D009019 4.4e-22 109.0 167 45.5
PSO837G0056 Papaver somniferum HOM05D007215 ORTHO05D009019 9.9e-22 107.8 223 40.4
MD17G1178000 Malus domestica HOM05D007215 ORTHO05D009019 8.4e-21 104.8 108 52.8
CsaV3_6G007050 Cucumis sativus L. HOM05D007215 ORTHO05D009019 1.4e-20 104.0 207 39.1
HPP92_007596 Vanilla planifolia HOM05D007215 ORTHO05D009019 4.2e-20 102.4 130 46.9
Os01g0393300 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 7.1e-20 101.7 205 40.0
Lj6P211T14 Lonicera japonica HOM05D007215 ORTHO05D009019 9.3e-20 101.3 115 50.4
PGR042G0468 Punica granatum HOM05D007215 ORTHO05D009019 1.2e-19 100.9 214 39.7
Migut.I00402 Erythranthe guttata HOM05D007215 ORTHO05D009019 7.8e-19 98.2 106 57.5
MELO3C022424.2 Cucumis melo HOM05D007215 ORTHO05D009019 6.2e-16 88.6 175 39.4
Gohir.D10G122900 Gossypium hirsutum HOM05D007215 ORTHO05D009019 1.3e-10 70.9 131 42.0
Os04g0495900 Oryza sativa ssp. japonica HOM05D007215 ORTHO05D009019 5.1e-10 68.9 210 34.3
Zm00001eb078580 Zea mays HOM05D007215 ORTHO05D009019 1.6e-08 63.9 209 33.0


User provided reference genes

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