Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0110491 Helianthus annuus HOM05D003718 ORTHO05D004402 0.0e+00 1246.1 648 100.0
ECA236G3831 Erigeron canadensis HOM05D003718 ORTHO05D004402 3.8e-306 1054.3 641 84.6
Lsat_1_v5_gn_8_92540 Lactuca sativa HOM05D003718 ORTHO05D004402 1.7e-298 1028.9 624 83.5
Dinv34637 Davidia involucrata HOM05D003718 ORTHO05D004402 6.6e-266 920.6 645 71.6
CSS0049010 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 3.2e-260 901.7 645 72.4
CSS0040480 Camellia sinensis var. sinensis HOM05D003718 ORTHO05D004402 8.7e-258 893.6 645 71.8
Solyc05g046330.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 4.8e-256 887.9 644 70.2
Sopen05g027610 Solanum pennellii HOM05D003718 ORTHO05D004402 4.0e-255 884.8 644 69.9
vmacro14814 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 9.0e-255 883.6 645 71.3
Actinidia07305 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.6e-254 882.1 645 71.0
Migut.D00439 Erythranthe guttata HOM05D003718 ORTHO05D004402 1.3e-253 879.8 644 68.6
CAN.G106.18 Capsicum annuum HOM05D003718 ORTHO05D004402 8.4e-253 877.1 643 69.8
Cfa013046 Carpinus fangiana HOM05D003718 ORTHO05D004402 5.4e-252 874.4 645 68.8
QL09p039591 Quercus lobata HOM05D003718 ORTHO05D004402 1.0e-250 870.2 664 67.6
Cc01_g18200 Coffea canephora HOM05D003718 ORTHO05D004402 3.9e-250 868.2 646 68.0
GSVIVG01028357001 Vitis vinifera HOM05D003718 ORTHO05D004402 5.6e-249 864.4 645 67.4
Sopen07g005600 Solanum pennellii HOM05D003718 ORTHO05D004402 1.3e-248 863.2 644 68.3
CiPaw.04G187700 Carya illinoinensis HOM05D003718 ORTHO05D004402 1.6e-248 862.8 645 69.0
Hma1.2p1_0273F.1_g109540 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 1.6e-248 862.8 646 70.0
Solyc07g014700.4 Solanum lycopersicum HOM05D003718 ORTHO05D004402 3.6e-248 861.7 644 68.5
CiPaw.03G266000 Carya illinoinensis HOM05D003718 ORTHO05D004402 6.2e-248 860.9 645 68.5
Lsat_1_v5_gn_5_182920 Lactuca sativa HOM05D003718 ORTHO05D004402 1.8e-247 859.4 644 69.4
MSTRG.21485 Avicennia marina HOM05D003718 ORTHO05D004402 2.4e-247 859.0 644 66.5
Gohir.D07G156100 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.0e-246 855.9 645 66.0
Manes.12G033700 Manihot esculenta HOM05D003718 ORTHO05D004402 2.6e-246 855.5 645 67.3
Duzib133G1085 Durio zibethinus HOM05D003718 ORTHO05D004402 3.4e-246 855.1 645 66.7
Thecc.01G255900 Theobroma cacao HOM05D003718 ORTHO05D004402 4.5e-246 854.7 645 66.7
Gorai.001G179000 Gossypium raimondii HOM05D003718 ORTHO05D004402 5.8e-246 854.4 645 65.9
TWI12G1081 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 9.9e-246 853.6 645 66.4
TWI75G1389 Tripterygium wilfordii HOM05D003718 ORTHO05D004402 2.2e-245 852.4 645 65.9
CANSAT01G0671 Cannabis sativa HOM05D003718 ORTHO05D004402 3.8e-245 851.7 645 68.1
FvH4_2g21250 Fragaria vesca HOM05D003718 ORTHO05D004402 1.4e-244 849.7 644 68.0
Peaxi162Scf00320g00717 Petunia axillaris HOM05D003718 ORTHO05D004402 1.9e-244 849.4 644 67.5
Gohir.A07G149800 Gossypium hirsutum HOM05D003718 ORTHO05D004402 2.4e-244 849.0 645 66.0
Duzib211G0290 Durio zibethinus HOM05D003718 ORTHO05D004402 3.2e-244 848.6 645 65.1
Prupe.8G221600 Prunus persica HOM05D003718 ORTHO05D004402 1.6e-243 846.3 645 66.7
RcHm_v2.0_Chr6g0287811 Rosa chinensis HOM05D003718 ORTHO05D004402 1.6e-243 846.3 644 67.5
Atru.chr5.1725 Acer truncatum HOM05D003718 ORTHO05D004402 4.6e-243 844.7 645 65.9
Ciclev10019124m.g Citrus clementina HOM05D003718 ORTHO05D004402 6.0e-243 844.3 645 65.7
FAN15G3248 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.0e-242 843.6 644 67.2
FAN24G2691 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.0e-242 843.6 644 68.0
Potri.002G036600 Populus trichocarpa HOM05D003718 ORTHO05D004402 1.0e-242 843.6 644 66.1
MD05G1194900 Malus domestica HOM05D003718 ORTHO05D004402 2.3e-242 842.4 650 66.5
DCAR_000921 Daucus carota HOM05D003718 ORTHO05D004402 1.9e-241 839.3 644 66.3
Manes.13G035300 Manihot esculenta HOM05D003718 ORTHO05D004402 4.3e-241 838.2 645 66.5
Oeu052043.2 Olea europaea HOM05D003718 ORTHO05D004402 4.3e-241 838.2 756 59.3
SalBow4G0483 Salvia bowleyana HOM05D003718 ORTHO05D004402 2.8e-240 835.5 663 64.4
CsaV3_1G015830 Cucumis sativus L. HOM05D003718 ORTHO05D004402 4.8e-240 834.7 645 65.9
Potri.005G226100 Populus trichocarpa HOM05D003718 ORTHO05D004402 1.1e-239 833.6 645 65.0
FAN27G0576 Fragaria x ananassa HOM05D003718 ORTHO05D004402 1.5e-238 829.7 677 64.3
CAN.G54.7 Capsicum annuum HOM05D003718 ORTHO05D004402 2.0e-238 829.3 644 65.7
MD10G1181500 Malus domestica HOM05D003718 ORTHO05D004402 3.4e-238 828.6 651 66.1
TAR633G0796 Trochodendron aralioides HOM05D003718 ORTHO05D004402 3.4e-238 828.6 646 65.3
Glyma.03G164400 Glycine max HOM05D003718 ORTHO05D004402 7.6e-238 827.4 644 64.8
Duzib138G1036 Durio zibethinus HOM05D003718 ORTHO05D004402 1.0e-237 827.0 645 64.3
Sed0001928 Sechium edule HOM05D003718 ORTHO05D004402 1.0e-237 827.0 645 65.1
MELO3C025537.2 Cucumis melo HOM05D003718 ORTHO05D004402 3.8e-237 825.1 645 65.3
Eucgr.K03255 Eucalyptus grandis HOM05D003718 ORTHO05D004402 1.1e-236 823.5 645 65.4
Sabra02G0029600 Salix brachista HOM05D003718 ORTHO05D004402 9.3e-236 820.5 677 62.3
Aqoxy1G01842 Aquilegia oxysepala HOM05D003718 ORTHO05D004402 1.2e-235 820.1 645 64.8
TAR362G0778 Trochodendron aralioides HOM05D003718 ORTHO05D004402 1.6e-235 819.7 648 65.1
Gorai.007G147600 Gossypium raimondii HOM05D003718 ORTHO05D004402 7.9e-235 817.4 645 64.8
VMungo1383G2169 Vigna mungo HOM05D003718 ORTHO05D004402 7.9e-235 817.4 645 64.5
Gohir.D11G137575 Gossypium hirsutum HOM05D003718 ORTHO05D004402 1.8e-234 816.2 645 64.8
Rhsim01G0262400 Rhododendron simsii HOM05D003718 ORTHO05D004402 2.3e-234 815.8 607 70.2
SGA_v2.0_scaffold138G35211 Striga asiatica HOM05D003718 ORTHO05D004402 8.7e-234 813.9 740 58.6
Sabra05G0174600 Salix brachista HOM05D003718 ORTHO05D004402 4.3e-233 811.6 668 61.7
Phvul.001G162000 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 5.7e-233 811.2 645 63.9
Gohir.A11G131600 Gossypium hirsutum HOM05D003718 ORTHO05D004402 9.6e-233 810.4 645 65.0
Nn1g02814 Nelumbo nucifera HOM05D003718 ORTHO05D004402 2.8e-232 808.9 647 63.2
Glyma.19G165800 Glycine max HOM05D003718 ORTHO05D004402 3.7e-232 808.5 645 63.7
Nitab4.5_0001572g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 6.3e-232 807.7 644 64.8
Psat6g054080 Pisum sativum HOM05D003718 ORTHO05D004402 2.0e-230 802.7 645 62.9
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.6e-230 802.4 639 66.0
Lalb_Chr21g0313961 Lupinus albus HOM05D003718 ORTHO05D004402 4.5e-230 801.6 645 63.6
SGA_v2.0_scaffold1G00624 Striga asiatica HOM05D003718 ORTHO05D004402 1.4e-228 796.6 644 63.7
Medtr1g069780 Medicago truncatula HOM05D003718 ORTHO05D004402 1.9e-228 796.2 645 62.0
Peaxi162Scf00906g00225 Petunia axillaris HOM05D003718 ORTHO05D004402 1.9e-228 796.2 667 63.3
Nitab4.5_0000413g0180 Nicotiana tabacum HOM05D003718 ORTHO05D004402 2.5e-228 795.8 644 64.6
Lj5g0026512 Lotus japonicus HOM05D003718 ORTHO05D004402 2.1e-227 792.7 645 62.5
Lalb_Chr02g0152551 Lupinus albus HOM05D003718 ORTHO05D004402 1.3e-226 790.0 645 63.1
Phvul.007G191800 Phaseolus vulgaris HOM05D003718 ORTHO05D004402 6.7e-226 787.7 651 62.1
Ca_09672_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 1.3e-224 783.5 647 62.3
THA.LOC104812416 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 8.2e-224 780.8 646 63.2
CARHR227730 Cardamine hirsuta HOM05D003718 ORTHO05D004402 1.1e-223 780.4 645 62.6
Glyma.10G038000 Glycine max HOM05D003718 ORTHO05D004402 1.8e-223 779.6 646 62.1
arahy.Tifrunner.gnm1.ann1.FU7SP6 Arachis hypogaea HOM05D003718 ORTHO05D004402 6.9e-223 777.7 658 61.1
THA.LOC104806254 Tarenaya hassleriana HOM05D003718 ORTHO05D004402 9.1e-223 777.3 645 62.5
arahy.Tifrunner.gnm1.ann1.QXN52H Arachis hypogaea HOM05D003718 ORTHO05D004402 1.5e-222 776.5 658 61.1
Nn3g19693 Nelumbo nucifera HOM05D003718 ORTHO05D004402 2.0e-222 776.2 647 61.4
TPR.G5874 Trifolium pratense HOM05D003718 ORTHO05D004402 2.0e-222 776.2 651 61.6
AL7G32970 Arabidopsis lyrata HOM05D003718 ORTHO05D004402 4.5e-222 775.0 645 62.2
Thhalv10024580m.g Eutrema salsugineum HOM05D003718 ORTHO05D004402 3.2e-220 768.8 645 61.4
PGR031G0689 Punica granatum HOM05D003718 ORTHO05D004402 6.1e-219 764.6 645 60.2
ATR0736G006 Amborella trichopoda HOM05D003718 ORTHO05D004402 1.8e-218 763.1 645 60.2
Carub.0007s2028 Capsella rubella HOM05D003718 ORTHO05D004402 8.8e-218 760.8 645 61.2
AUR62013766 Chenopodium quinoa HOM05D003718 ORTHO05D004402 1.1e-217 760.4 639 60.7
AT4G21150 Arabidopsis thaliana HOM05D003718 ORTHO05D004402 3.3e-217 758.8 645 61.1
arahy.Tifrunner.gnm1.ann1.EWE7BX Arachis hypogaea HOM05D003718 ORTHO05D004402 4.4e-217 758.4 683 58.3
VMungo0720G0687 Vigna mungo HOM05D003718 ORTHO05D004402 1.8e-215 753.1 651 59.3
arahy.Tifrunner.gnm1.ann1.B1YDGW Arachis hypogaea HOM05D003718 ORTHO05D004402 3.1e-215 752.3 683 57.5
BolC1t01458H Brassica oleracea HOM05D003718 ORTHO05D004402 2.2e-213 746.1 645 60.2
Sp7g19230 Schrenkiella parvula HOM05D003718 ORTHO05D004402 2.9e-213 745.7 645 60.2
BcaC09g51252 Brassica carinata HOM05D003718 ORTHO05D004402 1.9e-212 743.0 645 59.8
PSO210G5136 Papaver somniferum HOM05D003718 ORTHO05D004402 1.6e-211 740.0 646 59.6
CDE07G1087 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 4.7e-211 738.4 645 59.1
PSO832G2930 Papaver somniferum HOM05D003718 ORTHO05D004402 1.0e-210 737.3 646 59.6
ClCG03G002590 Citrullus lanatus HOM05D003718 ORTHO05D004402 5.7e-209 731.5 645 59.5
BcaNung03839 Brassica carinata HOM05D003718 ORTHO05D004402 1.3e-208 730.3 619 60.6
EL10Ac1g00739 Beta vulgaris HOM05D003718 ORTHO05D004402 4.8e-208 728.4 654 58.7
CDE04G2599 Ceratophyllum demersum HOM05D003718 ORTHO05D004402 2.4e-207 726.1 645 58.3
BraA03t14340Z Brassica rapa HOM05D003718 ORTHO05D004402 7.0e-207 724.5 662 58.3
Hund17111 Selenicereus undatus HOM05D003718 ORTHO05D004402 8.5e-205 717.6 601 60.7
Os01g0911200 Oryza sativa ssp. japonica HOM05D003718 ORTHO05D004402 1.1e-204 717.2 646 57.3
unitig_22.g5287 Utricularia gibba HOM05D003718 ORTHO05D004402 5.5e-204 714.9 659 56.8
Zm00001eb143710 Zea mays HOM05D003718 ORTHO05D004402 7.2e-204 714.5 644 56.5
Rhsim13G0036100 Rhododendron simsii HOM05D003718 ORTHO05D004402 9.4e-204 714.1 566 65.7
Psat3g056400 Pisum sativum HOM05D003718 ORTHO05D004402 1.0e-202 710.7 645 58.4
TPR.G9204 Trifolium pratense HOM05D003718 ORTHO05D004402 1.4e-202 710.3 664 57.2
Zm00001eb365020 Zea mays HOM05D003718 ORTHO05D004402 4.4e-201 705.3 644 56.5
Aa31LG6G3160 Aethionema arabicum HOM05D003718 ORTHO05D004402 4.1e-199 698.7 613 59.2
BraA01t01195Z Brassica rapa HOM05D003718 ORTHO05D004402 1.0e-197 694.1 607 58.8
C01p15100 Brassica napus HOM05D003718 ORTHO05D004402 1.7e-197 693.3 606 58.7
A01p12510 Brassica napus HOM05D003718 ORTHO05D004402 8.5e-197 691.0 607 58.5
unitig_8.g3735 Utricularia gibba HOM05D003718 ORTHO05D004402 1.9e-196 689.9 649 56.2
HPP92_000351 Vanilla planifolia HOM05D003718 ORTHO05D004402 6.8e-194 681.4 617 57.4
Nitab4.5_0005411g0050 Nicotiana tabacum HOM05D003718 ORTHO05D004402 2.0e-193 679.9 607 59.6
C07p51100 Brassica napus HOM05D003718 ORTHO05D004402 4.4e-193 678.7 615 58.0
BolC7t45610H Brassica oleracea HOM05D003718 ORTHO05D004402 4.4e-193 678.7 615 58.0
Ca_08683_v3 Cicer arietinum L. HOM05D003718 ORTHO05D004402 5.7e-193 678.3 648 56.8
A03p52670 Brassica napus HOM05D003718 ORTHO05D004402 9.8e-193 677.6 615 57.9
COL.COLO4_04023 Corchorus olitorius HOM05D003718 ORTHO05D004402 1.1e-191 674.1 578 59.7
Sc02g0003190 Simmondsia chinensis HOM05D003718 ORTHO05D004402 4.7e-187 658.7 572 58.6
AUR62023389 Chenopodium quinoa HOM05D003718 ORTHO05D004402 5.7e-185 651.7 639 54.8
BolC3t20629H Brassica oleracea HOM05D003718 ORTHO05D004402 4.5e-182 642.1 687 51.8
C03p83480 Brassica napus HOM05D003718 ORTHO05D004402 3.6e-171 605.9 696 49.4
BcaC01g00710 Brassica carinata HOM05D003718 ORTHO05D004402 5.2e-162 575.5 550 56.5
Nitab4.5_0005095g0020 Nicotiana tabacum HOM05D003718 ORTHO05D004402 1.0e-157 561.2 502 59.2
Cpa.g.sc20.44 Carica papaya HOM05D003718 ORTHO05D004402 3.9e-157 559.3 644 48.8
Ah.05g177770 Amaranthus hybridus HOM05D003718 ORTHO05D004402 7.3e-156 555.1 489 57.3
Mapoly0028s0115 Marchantia polymorpha HOM05D003718 ORTHO05D004402 8.7e-133 478.4 648 42.3
Actinidia37517 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.8e-130 470.7 511 53.4
CsaV3_UNG055470 Cucumis sativus L. HOM05D003718 ORTHO05D004402 4.2e-127 459.5 432 57.2
HanXRQChr11g0336771 Helianthus annuus HOM05D003718 ORTHO05D004402 1.0e-120 438.3 378 64.6
AUR62043414 Chenopodium quinoa HOM05D003718 ORTHO05D004402 8.5e-112 408.7 356 59.8
SEGI_27157 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 3.8e-104 383.3 361 53.5
vmacro02673 Vaccinium macrocarpon HOM05D003718 ORTHO05D004402 4.7e-102 376.3 315 63.5
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 5.9e-97 359.4 387 50.6
A08p15230 Brassica napus HOM05D003718 ORTHO05D001664 3.5e-89 333.6 519 41.6
EL10Ac1g02094 Beta vulgaris HOM05D003718 ORTHO05D004402 7.7e-89 332.4 296 55.4
FAN20G1425 Fragaria x ananassa HOM05D003718 ORTHO05D004402 6.5e-88 329.3 260 65.0
AagrBONN_evm.TU.Sc2ySwM_340.234 Anthoceros agrestis HOM05D003718 ORTHO05D004402 8.5e-80 302.4 424 42.5
Haze_21407 Corylus avellana HOM05D003718 ORTHO05D004402 1.1e-79 302.0 260 60.8
CBR_g32152 Chara braunii HOM05D003718 ORTHO05D004402 4.2e-71 273.5 644 32.6
Pp3c7_6480 Physcomitrium patens HOM05D003718 ORTHO05D004402 2.8e-67 260.8 382 42.7
Hma1.2p1_0576F.1_g181950 Hydrangea macrophylla HOM05D003718 ORTHO05D004402 3.4e-60 237.3 307 47.9
Actinidia09538 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.5e-57 227.3 156 76.3
Psat7g093680 Pisum sativum HOM05D003718 ORTHO05D004402 1.7e-56 224.9 299 44.1
Actinidia09536 Actinidia chinensis HOM05D003718 ORTHO05D004402 2.2e-51 208.0 263 48.7
FAN27G1677 Fragaria x ananassa HOM05D003718 ORTHO05D004402 6.2e-46 189.9 187 54.0
HPP92_000418 Vanilla planifolia HOM05D003718 ORTHO05D004402 5.6e-39 166.8 605 25.8
SEGI_31370 Sequoiadendron giganteum HOM05D003718 ORTHO05D004402 1.3e-35 155.6 181 47.0
SMO367G0218 Selaginella moellendorffii HOM05D003718 ORTHO05D004402 4.6e-33 147.1 138 54.3
Psat6g086960 Pisum sativum HOM05D003718 ORTHO05D004402 3.6e-30 137.5 96 68.8
Actinidia09537 Actinidia chinensis HOM05D003718 ORTHO05D004402 9.0e-29 132.9 161 48.4
arahy.Tifrunner.gnm1.ann1.S1G2KX Arachis hypogaea HOM05D003718 ORTHO05D004402 2.2e-27 128.3 118 55.1
SHI09762 Sapria himalayana HOM05D003718 ORTHO05D004402 3.8e-27 127.5 147 48.3
CsaV3_UNG055460 Cucumis sativus L. HOM05D003718 ORTHO05D004402 4.9e-27 127.1 147 46.9
arahy.Tifrunner.gnm1.ann1.6B4W14 Arachis hypogaea HOM05D003718 ORTHO05D004402 7.1e-26 123.2 79 75.9
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 4.6e-25 120.6 78 75.6
Actinidia25800 Actinidia chinensis HOM05D003718 ORTHO05D004402 1.0e-24 119.4 194 40.2
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 3.0e-24 117.9 140 50.7
Actinidia30158 Actinidia chinensis HOM05D003718 ORTHO05D004402 8.7e-24 116.3 81 67.9
Cre08.g368450 Chlamydomonas reinhardtii HOM05D003718 ORTHO05D004402 5.6e-23 113.6 302 32.5
Lsat_1_v5_gn_3_107020 Lactuca sativa HOM05D003718 ORTHO05D004402 2.6e-20 104.8 106 54.7
Lsat_1_v5_gn_4_881 Lactuca sativa HOM05D003718 ORTHO05D004402 4.5e-20 104.0 126 47.6
Psat6g087000 Pisum sativum HOM05D003718 ORTHO05D004402 7.9e-17 93.2 67 68.7
Lsat_1_v5_gn_9_27880 Lactuca sativa HOM05D003718 ORTHO05D004402 1.0e-16 92.8 177 38.4
Actinidia30157 Actinidia chinensis HOM05D003718 ORTHO05D057597 5.6e-15 87.0 86 55.8
Actinidia25801 Actinidia chinensis HOM05D003718 ORTHO05D004402 3.2e-10 71.2 117 39.3
Gohir.A01G185580 Gossypium hirsutum HOM05D003718 ORTHO05D000087 1.5e-07 62.4 46 58.7
arahy.Tifrunner.gnm1.ann1.LM6F6Z Arachis hypogaea HOM05D003718 ORTHO05D004402 3.3e-07 61.2 113 32.7


User provided reference genes

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