Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0109441 Helianthus annuus HOM05D013419 ORTHO05D019250 1.5e-217 759.2 384 100.0
HanXRQChr13g0415461 Helianthus annuus HOM05D013419 ORTHO05D019250 1.5e-217 759.2 384 100.0
HanXRQChr12g0373291 Helianthus annuus HOM05D013419 ORTHO05D019250 4.3e-172 608.2 384 81.8
HanXRQChr02g0050561 Helianthus annuus HOM05D013419 ORTHO05D019250 1.4e-117 427.2 240 89.6
HanXRQChr16g0530001 Helianthus annuus HOM05D013419 ORTHO05D007881 2.5e-95 353.2 249 71.1
HanXRQChr17g0568221 Helianthus annuus HOM05D013419 ORTHO05D007881 2.4e-58 230.3 424 39.4
HanXRQChr04g0109861 Helianthus annuus HOM05D013419 ORTHO05D019250 5.1e-48 196.1 114 90.4
HanXRQChr17g0553271 Helianthus annuus HOM05D013419 ORTHO05D019250 2.9e-43 180.3 112 81.2
HanXRQChr04g0107221 Helianthus annuus HOM05D013419 ORTHO05D019250 7.1e-42 175.6 149 68.5
ECA232G3233 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.3e-27 128.3 324 30.6
ECA247G3723 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.2e-25 121.7 339 29.8
HanXRQChr01g0005601 Helianthus annuus HOM05D017262 ORTHO05D009814 2.7e-25 120.6 332 31.3
HanXRQChr04g0114771 Helianthus annuus HOM05D017262 ORTHO05D009814 4.6e-25 119.8 332 31.3
Lsat_1_v5_gn_6_87320 Lactuca sativa HOM05D003598 ORTHO05D009814 3.3e-23 113.6 286 29.7
ECA248G0526 Erigeron canadensis HOM05D008130 ORTHO05D007881 7.4e-23 112.5 221 35.3
HanXRQChr13g0394471 Helianthus annuus HOM05D017262 ORTHO05D009814 2.2e-22 110.9 327 30.9
HanXRQChr01g0017261 Helianthus annuus HOM05D017262 ORTHO05D009814 1.4e-21 108.2 331 30.2
ECA236G0951 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.8e-21 107.8 332 31.3
HanXRQChr07g0195981 Helianthus annuus HOM05D007803 ORTHO05D007881 1.8e-21 107.8 255 32.9
ECA233G3349 Erigeron canadensis HOM05D008130 ORTHO05D007881 3.1e-21 107.1 175 35.4
ECA246G3033 Erigeron canadensis HOM05D008130 ORTHO05D007881 4.1e-21 106.7 331 30.8
HanXRQChr16g0526551 Helianthus annuus HOM05D007803 ORTHO05D007881 9.1e-21 105.5 277 33.2
HanXRQChr01g0006531 Helianthus annuus HOM05D001218 ORTHO05D003142 4.5e-20 103.2 272 33.5
ECA233G4320 Erigeron canadensis HOM05D010753 ORTHO05D007881 1.0e-19 102.1 261 30.3
ECA232G2947 Erigeron canadensis HOM05D008130 ORTHO05D007881 2.2e-19 100.9 291 32.0
ECA233G1740 Erigeron canadensis HOM05D008130 ORTHO05D007881 2.2e-19 100.9 261 28.4
ECA234G3966 Erigeron canadensis HOM05D008130 ORTHO05D007881 3.8e-19 100.1 352 29.5
ECA238G3743 Erigeron canadensis HOM05D007803 ORTHO05D009814 3.8e-19 100.1 296 27.7
ECA246G2896 Erigeron canadensis HOM05D007803 ORTHO05D009814 3.8e-19 100.1 296 27.7
ECA232G4745 Erigeron canadensis HOM05D008130 ORTHO05D007881 5.0e-19 99.8 352 30.1
ECA246G0647 Erigeron canadensis HOM05D007803 ORTHO05D009814 6.5e-19 99.4 300 27.3
ECA236G0993 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.1e-18 98.6 296 27.4
ECA236G2067 Erigeron canadensis HOM05D008130 ORTHO05D007881 4.2e-18 96.7 354 30.2
ECA248G2644 Erigeron canadensis HOM05D007803 ORTHO05D009814 9.4e-18 95.5 296 26.7
ECA232G4737 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.2e-17 95.1 288 27.1
ECA233G2700 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.2e-17 95.1 346 26.3
ECA232G1370 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.7e-17 94.0 346 26.9
ECA233G5388 Erigeron canadensis HOM05D008130 ORTHO05D007881 4.7e-17 93.2 234 29.9
ECA240G2336 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.0e-16 92.0 299 25.8
ECA238G0476 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.4e-16 91.7 289 27.3
ECA240G1952 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.8e-16 91.3 320 27.8
ECA234G1458 Erigeron canadensis HOM05D007803 ORTHO05D009814 3.0e-16 90.5 275 26.9
HanXRQChr01g0025701 Helianthus annuus HOM05D013419 ORTHO05D019250 3.9e-16 90.1 74 59.5
HanXRQChr08g0222911 Helianthus annuus HOM05D006295 ORTHO05D008061 5.2e-16 89.7 202 31.7
ECA234G3171 Erigeron canadensis HOM05D008130 ORTHO05D007881 8.8e-16 89.0 327 25.4
ECA240G3613 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.5e-15 88.2 296 26.7
ECA240G1405 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.0e-15 87.8 227 30.8
HanXRQChr10g0281341 Helianthus annuus HOM05D007803 ORTHO05D000401 2.6e-15 87.4 315 27.3
HanXRQChr01g0013611 Helianthus annuus HOM05D007803 ORTHO05D007881 4.4e-15 86.7 164 33.5
HanXRQChr04g0121201 Helianthus annuus HOM05D006295 ORTHO05D008061 5.7e-15 86.3 288 26.7
HanXRQChr02g0052081 Helianthus annuus HOM05D006295 ORTHO05D008061 7.4e-15 85.9 280 26.8
HanXRQChr14g0448581 Helianthus annuus HOM05D006295 ORTHO05D008061 7.4e-15 85.9 399 26.6
Lsat_1_v5_gn_5_120561 Lactuca sativa HOM05D006295 ORTHO05D008061 7.4e-15 85.9 372 27.7
ECA238G4145 Erigeron canadensis HOM05D010753 ORTHO05D007881 9.7e-15 85.5 175 26.9
ECA232G3669 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.2e-14 84.3 201 30.3
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-14 84.3 185 30.8
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-14 84.3 185 30.8
ECA246G2566 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.8e-14 84.0 420 25.5
ECA247G0399 Erigeron canadensis HOM05D008130 ORTHO05D007881 2.8e-14 84.0 178 33.7
ECA233G4733 Erigeron canadensis HOM05D007803 ORTHO05D009814 3.7e-14 83.6 387 26.1
ECA233G5275 Erigeron canadensis HOM05D000340 ORTHO05D000677 3.7e-14 83.6 266 30.8
ECA238G3252 Erigeron canadensis HOM05D007803 ORTHO05D009814 4.8e-14 83.2 365 25.2
HanXRQChr03g0063981 Helianthus annuus HOM05D006295 ORTHO05D008061 4.8e-14 83.2 294 25.2
ECA240G2059 Erigeron canadensis HOM05D007803 ORTHO05D009814 6.3e-14 82.8 201 30.8
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 8.2e-14 82.4 185 30.3
ECA236G1155 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.4e-13 81.6 195 30.8
ECA240G1000 Erigeron canadensis HOM05D008130 ORTHO05D007881 3.1e-13 80.5 270 29.3
ECA233G3145 Erigeron canadensis HOM05D007803 ORTHO05D009814 4.1e-13 80.1 234 26.9
HanXRQChr11g0327781 Helianthus annuus HOM05D006295 ORTHO05D008061 5.3e-13 79.7 291 25.1
HanXRQChr16g0530931 Helianthus annuus HOM05D017262 ORTHO05D009814 5.3e-13 79.7 189 31.7
ECA234G0773 Erigeron canadensis HOM05D007803 ORTHO05D009814 7.0e-13 79.3 295 24.7
HanXRQChr17g0552731 Helianthus annuus HOM05D006295 ORTHO05D008061 9.1e-13 79.0 388 24.2
ECA233G0556 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.6e-12 78.2 253 28.1
ECA238G3247 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.0e-12 77.8 295 25.1
ECA236G2526 Erigeron canadensis HOM05D009979 ORTHO05D007881 7.7e-12 75.9 120 30.8
ECA240G1435 Erigeron canadensis HOM05D007803 ORTHO05D009814 5.0e-11 73.2 291 26.1
Lsat_1_v5_gn_1_72241 Lactuca sativa HOM05D004618 ORTHO05D005318 6.5e-11 72.8 117 31.6
ECA232G2931 Erigeron canadensis HOM05D007803 ORTHO05D009814 8.5e-11 72.4 292 22.9
HanXRQChr04g0113461 Helianthus annuus HOM05D013419 ORTHO05D007881 8.5e-11 72.4 95 49.5
ECA234G2140 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.5e-10 71.6 174 28.7
ECA238G2376 Erigeron canadensis HOM05D009979 ORTHO05D007881 1.5e-10 71.6 116 34.5
ECA246G3089 Erigeron canadensis HOM05D009979 ORTHO05D007881 1.5e-10 71.6 121 29.8
ECA232G2427 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.9e-10 71.2 316 28.2
ECA233G2202 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.5e-10 70.9 346 25.7
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 2.5e-10 70.9 340 26.8
ECA248G1982 Erigeron canadensis HOM05D007803 ORTHO05D009814 3.2e-10 70.5 367 27.5
HanXRQChr09g0265661 Helianthus annuus HOM05D001576 ORTHO05D000401 3.2e-10 70.5 294 24.5
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 4.2e-10 70.1 119 31.9
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 4.2e-10 70.1 245 28.2
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 5.5e-10 69.7 252 25.0
ECA238G2353 Erigeron canadensis HOM05D008130 ORTHO05D007881 5.5e-10 69.7 239 28.0
ECA246G1137 Erigeron canadensis HOM05D000464 ORTHO05D000408 5.5e-10 69.7 150 32.0
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 7.2e-10 69.3 190 28.9
ECA234G0003 Erigeron canadensis HOM05D009979 ORTHO05D007881 1.2e-09 68.6 120 30.0
ECA233G0056 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.6e-09 68.2 154 31.2
ECA234G4859 Erigeron canadensis HOM05D007803 ORTHO05D009814 2.1e-09 67.8 265 22.6
ECA246G2573 Erigeron canadensis HOM05D007777 ORTHO05D007255 2.1e-09 67.8 155 30.3
ECA248G1155 Erigeron canadensis HOM05D008130 ORTHO05D007881 2.1e-09 67.8 176 29.0
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-09 67.8 334 24.9
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.7e-09 67.4 187 29.4
ECA238G3572 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.7e-09 67.4 139 30.2
ECA240G3243 Erigeron canadensis HOM05D008106 ORTHO05D010314 3.6e-09 67.0 134 29.9
Os09g0241700 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.6e-09 67.0 213 24.4
ECA234G0514 Erigeron canadensis HOM05D008130 ORTHO05D007881 4.7e-09 66.6 266 27.4
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.7e-09 66.6 190 27.4
ECA248G0467 Erigeron canadensis HOM05D008106 ORTHO05D010314 6.1e-09 66.2 291 26.5
ECA247G3187 Erigeron canadensis HOM05D008106 ORTHO05D010314 8.0e-09 65.9 110 33.6
ECA234G4372 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.0e-08 65.5 388 24.7
QL03p006855 Quercus lobata HOM05D001576 ORTHO05D000401 1.0e-08 65.5 264 26.9
QL06p039590 Quercus lobata HOM05D001576 ORTHO05D000401 1.0e-08 65.5 264 26.9
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-08 65.5 235 23.4
ECA232G4162 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.4e-08 65.1 139 30.2
ECA236G0632 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.4e-08 65.1 317 25.6
ECA236G4852 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.4e-08 65.1 201 26.9
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 1.8e-08 64.7 215 27.4
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 1.8e-08 64.7 218 27.5
ECA247G2432 Erigeron canadensis HOM05D007803 ORTHO05D009814 1.8e-08 64.7 152 28.9
Carub.0007s3077 Capsella rubella HOM05D000589 ORTHO05D000401 2.3e-08 64.3 251 26.3
ECA233G5889 Erigeron canadensis HOM05D009979 ORTHO05D007881 2.3e-08 64.3 120 27.5
TWI38G0936 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.3e-08 64.3 173 28.3
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.0e-08 63.9 167 28.7
ECA232G3565 Erigeron canadensis HOM05D009979 ORTHO05D007881 5.2e-08 63.2 97 28.9
ECA232G3958 Erigeron canadensis HOM05D008106 ORTHO05D010314 5.2e-08 63.2 110 30.9
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 5.2e-08 63.2 200 25.5
Aqoxy3G02601 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 6.7e-08 62.8 235 23.4
ECA234G0078 Erigeron canadensis HOM05D009979 ORTHO05D007881 6.7e-08 62.8 75 34.7
ECA240G0948 Erigeron canadensis HOM05D008106 ORTHO05D010314 6.7e-08 62.8 358 24.3
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 6.7e-08 62.8 188 27.1
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 6.7e-08 62.8 250 25.6
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 6.7e-08 62.8 250 25.6
TWI09G0456 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.7e-08 62.8 165 29.1
ECA233G2222 Erigeron canadensis HOM05D008106 ORTHO05D010314 8.8e-08 62.4 157 29.9
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 8.8e-08 62.4 257 23.7
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 8.8e-08 62.4 287 23.3
Aqoxy5G02702 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.2e-07 62.0 181 26.0
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 1.2e-07 62.0 158 30.4
ECA234G4753 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.2e-07 62.0 139 30.9
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 1.2e-07 62.0 188 27.1
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-07 62.0 239 26.4
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-07 61.6 149 27.5
ECA238G0120 Erigeron canadensis HOM05D007777 ORTHO05D007255 1.5e-07 61.6 241 25.3
ECA246G3121 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.5e-07 61.6 192 27.6
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 1.5e-07 61.6 187 26.2
ECA247G3734 Erigeron canadensis HOM05D009979 ORTHO05D007881 2.0e-07 61.2 114 28.9
ECA247G4060 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.0e-07 61.2 214 27.1
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 2.0e-07 61.2 274 25.5
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 2.0e-07 61.2 303 21.5
Aqoxy2G01003 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 2.6e-07 60.8 193 23.3
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.6e-07 60.8 243 26.7
ECA238G2715 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.6e-07 60.8 91 38.5
ECA247G1642 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.6e-07 60.8 304 23.7
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.6e-07 60.8 177 27.1
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.6e-07 60.8 204 28.4
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 3.3e-07 60.5 146 30.1
ECA248G0402 Erigeron canadensis HOM05D008130 ORTHO05D007881 3.3e-07 60.5 91 36.3
Aqoxy1G00950 Aquilegia oxysepala HOM05D017921 ORTHO05D000401 4.4e-07 60.1 232 22.4
ECA232G3714 Erigeron canadensis HOM05D009979 ORTHO05D007881 4.4e-07 60.1 98 28.6
ECA247G3361 Erigeron canadensis HOM05D007803 ORTHO05D009814 7.5e-07 59.3 407 23.8
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 7.5e-07 59.3 316 24.4
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 7.5e-07 59.3 298 27.2
AT5G41220 Arabidopsis thaliana HOM05D002591 ORTHO05D002791 9.7e-07 58.9 221 25.8
ECA234G1897 Erigeron canadensis HOM05D009979 ORTHO05D007881 9.7e-07 58.9 129 27.9
ECA234G3838 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-06 58.2 125 33.6
ECA248G0323 Erigeron canadensis HOM05D008130 ORTHO05D007881 1.7e-06 58.2 207 29.5
HanXRQChr03g0072721 Helianthus annuus HOM05D000061 ORTHO05D000050 1.7e-06 58.2 83 37.3
Os06g0521000 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.7e-06 58.2 201 25.9
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 1.7e-06 58.2 238 25.2
ECA234G2179 Erigeron canadensis HOM05D008130 ORTHO05D007881 2.2e-06 57.8 177 24.3
Lsat_1_v5_gn_0_33901 Lactuca sativa HOM05D007803 ORTHO05D009814 2.2e-06 57.8 74 33.8
Carub.0002s0950 Capsella rubella HOM05D000589 ORTHO05D000401 2.8e-06 57.4 188 28.2
ECA233G4829 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.8e-06 57.4 193 28.0
Lsat_1_v5_gn_5_25221 Lactuca sativa HOM05D007803 ORTHO05D009814 2.8e-06 57.4 165 28.5
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 2.8e-06 57.4 287 26.1
Carub.0001s3179 Capsella rubella HOM05D000589 ORTHO05D000401 3.7e-06 57.0 220 27.3
ECA238G2409 Erigeron canadensis HOM05D008106 ORTHO05D010314 3.7e-06 57.0 189 27.5
CANSAT56G3242 Cannabis sativa HOM05D002730 ORTHO05D003261 4.8e-06 56.6 169 26.0
Os01g0527900 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 4.8e-06 56.6 309 22.0
ECA238G2222 Erigeron canadensis HOM05D006295 ORTHO05D008061 6.3e-06 56.2 304 23.0
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.2e-06 55.8 266 24.1


User provided reference genes

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