Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 2.8e-210 734.9 353 100.0
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.7e-186 654.8 352 86.6
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 2.2e-183 645.6 350 86.3
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.7e-165 585.5 351 75.2
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 2.0e-163 579.3 360 73.9
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.0e-160 569.3 351 72.4
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 2.9e-159 565.5 352 73.0
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.9e-158 562.8 352 72.4
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 4.3e-158 561.6 351 73.2
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 4.7e-157 558.1 353 72.8
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.4e-156 556.6 351 72.9
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.2e-155 553.5 350 70.6
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.6e-155 552.4 352 71.9
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 3.4e-155 552.0 352 71.9
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.7e-154 548.5 384 67.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 1.8e-153 546.2 351 69.5
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 9.2e-153 543.9 351 69.2
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 9.2e-153 543.9 351 69.5
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 7.8e-152 540.8 351 68.4
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 6.6e-151 537.7 355 68.2
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.9e-150 536.2 351 70.1
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.6e-150 534.6 352 68.8
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 7.3e-150 534.3 352 69.0
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.6e-149 533.1 351 68.4
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.8e-149 532.3 351 66.4
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 4.7e-149 531.6 351 66.4
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 8.0e-149 530.8 351 67.0
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 8.0e-149 530.8 351 66.4
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 2.3e-148 529.3 351 66.1
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 5.2e-148 528.1 364 66.2
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 5.8e-147 524.6 351 67.2
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.5e-147 524.2 416 60.8
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.7e-146 523.1 353 67.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.2e-146 522.7 330 71.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 2.9e-146 522.3 352 67.9
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 2.9e-146 522.3 354 66.9
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 4.9e-146 521.5 351 67.2
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.9e-146 521.5 451 56.5
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.1e-145 520.4 416 60.3
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 3.0e-143 512.3 351 66.7
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.3e-142 508.4 353 64.3
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 7.3e-142 507.7 352 64.8
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 2.8e-141 505.8 352 64.8
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 6.2e-141 504.6 353 65.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.4e-140 503.4 352 65.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 4.0e-140 501.9 354 64.4
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 4.4e-139 498.4 352 63.1
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.4e-137 492.7 351 63.5
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 5.4e-137 491.5 353 62.9
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.6e-135 484.6 352 63.1
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 3.3e-134 482.3 320 66.6
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.1e-133 479.6 353 60.9
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 8.1e-133 477.6 352 60.5
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.1e-132 477.2 354 62.1
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 5.4e-129 464.9 352 60.5
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 4.6e-128 461.8 353 60.6
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.6e-128 461.8 353 60.6
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.3e-127 460.3 353 60.3
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 3.0e-127 459.1 499 48.7
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.5e-126 456.8 356 59.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 5.6e-126 454.9 351 59.0
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.6e-125 452.2 354 61.9
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 1.1e-121 440.7 456 49.8
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.7e-114 416.8 286 66.4
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 3.3e-94 349.4 356 48.9
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.5e-91 339.0 290 56.9
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.4e-89 334.0 358 47.5
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 7.9e-88 328.2 190 74.7
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.0e-82 311.2 343 49.0
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 5.0e-82 308.9 231 61.0
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 1.6e-80 303.9 197 66.5
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 1.4e-73 280.8 215 60.5
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 2.8e-69 266.5 163 71.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 7.0e-68 261.9 151 76.2
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 2.0e-59 233.8 235 50.2
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.7e-59 233.4 357 37.8
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 7.7e-59 231.9 249 49.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 5.5e-57 225.7 141 69.5
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.6e-48 196.4 159 57.9
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.6e-43 181.0 422 29.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.6e-40 171.0 105 73.3
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.2e-38 164.9 376 31.4
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 2.2e-37 160.6 127 60.6
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.2e-28 130.2 71 77.5
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 5.4e-28 129.4 70 78.6
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-27 126.7 108 55.6
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.0e-27 125.9 103 57.3
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-26 124.8 70 71.4
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 1.3e-26 124.8 70 71.4
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.9e-26 123.2 90 70.0
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.6e-26 122.5 104 52.9
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-25 121.7 90 70.0
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.5e-25 121.3 77 77.9
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.3e-25 120.2 90 70.0
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.3e-25 120.2 102 55.9
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 4.0e-23 113.2 113 50.4
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.4e-20 104.0 165 44.2
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.7e-19 100.5 199 31.2
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.5e-19 100.1 98 58.2
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.6e-18 95.5 96 44.8
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.6e-16 91.3 50 74.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 3.6e-16 90.1 65 60.0
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 5.2e-15 86.3 73 54.8
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.1e-12 76.6 50 60.0
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 5.6e-09 66.2 123 35.8
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 2.1e-08 64.3 57 49.1
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 4.4e-06 56.6 91 38.5


User provided reference genes

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