Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 1.2e-83 313.2 158 100.0
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 2.4e-52 209.1 134 76.9
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 2.7e-27 125.9 162 51.9
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 4.6e-27 125.2 171 48.5
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 1.1e-25 120.6 174 49.4
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.1e-25 120.6 169 52.1
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.9e-25 119.8 171 48.5
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 5.6e-25 118.2 176 47.7
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 7.3e-25 117.9 170 49.4
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 1.2e-24 117.1 148 49.3
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 6.2e-24 114.8 166 47.6
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 1.0e-23 114.0 165 47.9
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 1.8e-23 113.2 159 48.4
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 3.1e-23 112.5 168 48.8
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 4.0e-23 112.1 165 49.1
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 5.2e-23 111.7 186 46.2
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 6.8e-23 111.3 170 44.7
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 6.8e-23 111.3 165 48.5
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 6.8e-23 111.3 166 48.2
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 8.9e-23 110.9 162 46.3
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 8.9e-23 110.9 168 48.2
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 1.2e-22 110.5 160 48.1
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 2.0e-22 109.8 172 44.2
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.6e-22 109.4 174 43.7
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 5.8e-22 108.2 181 45.9
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 5.8e-22 108.2 169 44.4
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 5.8e-22 108.2 165 47.9
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 7.5e-22 107.8 158 44.9
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 7.5e-22 107.8 167 47.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 9.8e-22 107.5 169 45.6
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.3e-21 107.1 129 47.3
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 2.2e-21 106.3 150 44.0
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.2e-21 106.3 163 45.4
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.2e-21 106.3 163 45.4
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 2.9e-21 105.9 183 45.4
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 3.7e-21 105.5 137 48.2
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 3.7e-21 105.5 164 45.1
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.9e-21 105.1 166 45.2
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 6.4e-21 104.8 169 45.0
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 6.4e-21 104.8 170 47.1
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 8.3e-21 104.4 177 41.8
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 1.1e-20 104.0 168 42.9
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.1e-20 104.0 191 45.5
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 1.4e-20 103.6 183 42.6
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 1.4e-20 103.6 177 42.9
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 1.9e-20 103.2 156 43.6
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.9e-20 103.2 182 45.1
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 2.4e-20 102.8 167 43.1
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 3.2e-20 102.4 164 45.1
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 5.4e-20 101.7 167 43.7
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 5.4e-20 101.7 181 42.0
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 9.2e-20 100.9 175 41.1
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 9.2e-20 100.9 165 45.5
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 9.2e-20 100.9 155 46.5
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 1.2e-19 100.5 162 43.2
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 1.6e-19 100.1 166 44.6
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 1.6e-19 100.1 180 40.6
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.6e-19 100.1 180 40.6
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 2.0e-19 99.8 131 50.4
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 3.5e-19 99.0 185 41.6
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 4.6e-19 98.6 179 43.6
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 4.6e-19 98.6 181 43.6
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 6.0e-19 98.2 187 39.0
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 1.0e-18 97.4 164 43.9
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 1.0e-18 97.4 164 43.9
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 1.7e-18 96.7 163 43.6
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 2.3e-18 96.3 170 44.1
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 3.0e-18 95.9 176 40.3
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 3.0e-18 95.9 152 39.5
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 3.0e-18 95.9 152 39.5
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 3.0e-18 95.9 163 44.2
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 3.9e-18 95.5 167 44.3
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 3.9e-18 95.5 170 40.0
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 3.9e-18 95.5 164 44.5
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 3.9e-18 95.5 158 42.4
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 5.0e-18 95.1 170 41.2
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 8.6e-18 94.4 173 41.0
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.9e-17 93.2 190 39.5
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 1.9e-17 93.2 162 42.6
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 1.9e-17 93.2 182 41.2
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.5e-17 92.8 182 40.7
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 3.3e-17 92.4 186 40.9
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 3.3e-17 92.4 173 42.2
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 4.3e-17 92.0 204 38.2
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 7.3e-17 91.3 165 40.6
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 7.3e-17 91.3 165 40.6
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 7.3e-17 91.3 165 40.6
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 7.3e-17 91.3 182 41.8
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 9.5e-17 90.9 171 42.1
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 9.5e-17 90.9 168 40.5
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 9.5e-17 90.9 176 39.8
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 1.2e-16 90.5 164 45.1
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 2.8e-16 89.4 157 39.5
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 4.7e-16 88.6 165 41.8
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 8.1e-16 87.8 195 39.0
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 8.1e-16 87.8 159 40.9
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 1.1e-15 87.4 173 38.7
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 3.1e-15 85.9 170 41.8
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 3.1e-15 85.9 115 51.3
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 3.1e-15 85.9 174 41.4
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 4.0e-15 85.5 188 37.8
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 5.2e-15 85.1 182 40.1
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 5.2e-15 85.1 140 38.6
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 6.8e-15 84.7 183 39.9
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 8.9e-15 84.3 209 38.3
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 1.5e-14 83.6 176 37.5
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 2.0e-14 83.2 171 39.2
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 2.6e-14 82.8 130 48.5
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 4.4e-14 82.0 180 37.2
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 4.4e-14 82.0 177 38.4
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 3.7e-13 79.0 169 40.8
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 3.7e-13 79.0 170 39.4
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 4.9e-13 78.6 181 39.8
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 6.4e-13 78.2 157 40.1
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 6.4e-13 78.2 108 45.4
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.2e-12 75.9 160 41.9
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 4.1e-12 75.5 163 36.8
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 9.2e-12 74.3 136 39.0
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.2e-11 73.9 164 39.0
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 2.1e-11 73.2 160 39.4
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 2.7e-11 72.8 173 35.3
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 2.7e-11 72.8 182 36.8
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.6e-11 72.0 157 36.9
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 6.0e-11 71.6 90 45.6
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 6.0e-11 71.6 157 36.9
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 7.8e-11 71.2 130 40.8
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 3.0e-10 69.3 119 41.2
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.0e-10 69.3 119 41.2
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 6.6e-10 68.2 119 41.2
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.9e-09 66.6 154 35.1
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 4.3e-09 65.5 132 34.8
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 7.3e-09 64.7 181 35.4
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 9.5e-09 64.3 108 40.7
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 1.2e-08 63.9 150 39.3
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 1.6e-08 63.5 173 32.9
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 3.6e-08 62.4 184 34.2
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 4.7e-08 62.0 170 32.9
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 5.2e-07 58.5 181 32.6
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 1.2e-06 57.4 121 43.0
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.5e-06 57.0 107 41.1
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 4.4e-06 55.5 116 34.5


User provided reference genes

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