Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 1.4e-90 336.3 173 100.0
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 3.7e-30 135.6 144 52.1
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 1.7e-27 126.7 170 44.1
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 1.2e-25 120.6 129 55.0
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 2.0e-23 113.2 149 45.0
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 4.8e-22 108.6 138 46.4
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 6.3e-22 108.2 153 45.1
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 1.1e-21 107.5 141 46.8
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 1.1e-21 107.5 153 44.4
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 7.0e-21 104.8 144 46.5
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 2.6e-20 102.8 145 42.8
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 1.0e-19 100.9 156 42.9
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 1.7e-19 100.1 144 42.4
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 6.5e-19 98.2 159 44.0
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.1e-18 97.4 157 43.9
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.6e-17 93.6 149 44.3
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 4.7e-17 92.0 129 45.0
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 1.4e-16 90.5 152 42.1
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 1.8e-16 90.1 108 47.2
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 3.0e-16 89.4 146 39.0
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 4.0e-16 89.0 149 39.6
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 5.2e-16 88.6 150 38.7
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.2e-15 87.4 168 35.7
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.2e-15 87.4 145 40.0
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 2.0e-15 86.7 132 39.4
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 2.6e-15 86.3 132 40.9
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 3.4e-15 85.9 133 42.9
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 4.4e-15 85.5 147 39.5
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 5.7e-15 85.1 148 36.5
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 5.7e-15 85.1 132 43.2
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 7.5e-15 84.7 132 45.5
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 4.8e-14 82.0 137 39.4
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 4.8e-14 82.0 132 39.4
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 4.8e-14 82.0 148 35.8
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 4.8e-14 82.0 124 42.7
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 1.1e-13 80.9 142 35.2
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.4e-13 80.5 128 41.4
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 1.8e-13 80.1 129 41.9
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.8e-13 80.1 129 41.1
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 3.1e-13 79.3 149 36.2
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 4.1e-13 79.0 134 38.1
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 1.6e-12 77.0 123 38.2
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.0e-12 76.6 130 38.5
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 2.7e-12 76.3 130 38.5
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 2.7e-12 76.3 135 36.3
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 5.9e-12 75.1 131 38.9
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 7.7e-12 74.7 131 38.2
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 7.7e-12 74.7 133 39.1
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 1.0e-11 74.3 129 38.8
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.3e-11 73.9 135 37.8
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 1.7e-11 73.6 131 39.7
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 2.9e-11 72.8 129 38.0
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 2.9e-11 72.8 130 36.9
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 2.9e-11 72.8 153 32.0
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 3.8e-11 72.4 129 36.4
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 5.0e-11 72.0 125 38.4
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 6.5e-11 71.6 132 36.4
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 6.5e-11 71.6 135 36.3
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 1.1e-10 70.9 128 36.7
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 1.9e-10 70.1 126 37.3
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 1.9e-10 70.1 151 37.1
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 2.5e-10 69.7 126 36.5
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 2.5e-10 69.7 102 42.2
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 2.5e-10 69.7 146 36.3
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 4.2e-10 68.9 127 37.0
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 4.2e-10 68.9 127 37.0
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 4.2e-10 68.9 131 38.2
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 7.2e-10 68.2 88 45.5
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 7.2e-10 68.2 126 35.7
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 1.6e-09 67.0 97 42.3
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 2.1e-09 66.6 121 33.9
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 2.7e-09 66.2 131 36.6
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 4.7e-09 65.5 65 56.9
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 6.1e-09 65.1 127 36.2
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 6.1e-09 65.1 78 47.4
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 8.0e-09 64.7 149 33.6
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 1.0e-08 64.3 74 47.3
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.0e-08 64.3 136 31.6
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 1.8e-08 63.5 122 37.7
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 1.8e-08 63.5 78 46.2
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 2.3e-08 63.2 109 38.5
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 3.0e-08 62.8 124 36.3
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 1.5e-07 60.5 92 39.1
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.5e-07 60.5 85 41.2
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 2.0e-07 60.1 164 31.1
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 3.4e-07 59.3 70 45.7
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 5.7e-07 58.5 82 42.7
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 7.5e-07 58.2 87 40.2
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 7.5e-07 58.2 91 39.6
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 1.7e-06 57.0 78 41.0
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 2.8e-06 56.2 82 36.6
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 6.3e-06 55.1 73 41.1
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 8.3e-06 54.7 135 33.3
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 8.3e-06 54.7 134 31.3


User provided reference genes

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