Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0107311 Helianthus annuus HOM05D003533 ORTHO05D004009 5.9e-58 227.3 109 100.0
HanXRQChr09g0271891 Helianthus annuus HOM05D003533 ORTHO05D004009 1.2e-37 159.8 82 90.2
Lsat_1_v5_gn_4_73540 Lactuca sativa HOM05D003533 ORTHO05D004009 1.6e-23 112.8 82 62.2
ECA232G3153 Erigeron canadensis HOM05D002643 ORTHO05D003365 2.0e-18 95.9 67 68.7
CiPaw.06G076000 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.7e-09 66.2 77 44.2
CiPaw.06G076200 Carya illinoinensis HOM05D003533 ORTHO05D004009 1.7e-09 66.2 77 44.2
CiPaw.06G076100 Carya illinoinensis HOM05D003533 ORTHO05D004009 3.0e-09 65.5 77 44.2
Ah.02g112790 Amaranthus hybridus HOM05D003533 ORTHO05D004009 3.9e-09 65.1 98 36.7
CiPaw.06G076300 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.0e-09 64.7 77 44.2
Thecc.03G004000 Theobroma cacao HOM05D003533 ORTHO05D004009 6.6e-09 64.3 82 41.5
BcaB03g12939 Brassica carinata HOM05D003533 ORTHO05D004009 8.6e-09 63.9 69 44.9
Hma1.2p1_0160F.1_g070540 Hydrangea macrophylla HOM05D003533 ORTHO05D004009 1.9e-08 62.8 70 45.7
Thecc.03G004200 Theobroma cacao HOM05D003533 ORTHO05D004009 1.9e-08 62.8 88 38.6
CARHR019640 Cardamine hirsuta HOM05D003533 ORTHO05D004009 2.5e-08 62.4 48 56.2
AL1G31580 Arabidopsis lyrata HOM05D003533 ORTHO05D004009 3.3e-08 62.0 48 52.1
A08p30040 Brassica napus HOM05D003533 ORTHO05D004009 3.3e-08 62.0 70 44.3
BraA08t34939Z Brassica rapa HOM05D003533 ORTHO05D004009 3.3e-08 62.0 70 44.3
COL.COLO4_21432 Corchorus olitorius HOM05D003533 ORTHO05D004009 3.3e-08 62.0 70 47.1
QL10p012332 Quercus lobata HOM05D003533 ORTHO05D004009 4.3e-08 61.6 73 42.5
TPR.G37447 Trifolium pratense HOM05D003533 ORTHO05D004009 4.3e-08 61.6 65 50.8
QL03p067197 Quercus lobata HOM05D003533 ORTHO05D004009 5.6e-08 61.2 64 43.8
AT1G19020 Arabidopsis thaliana HOM05D003533 ORTHO05D004009 7.3e-08 60.8 46 52.2
A06p15230 Brassica napus HOM05D003533 ORTHO05D004009 7.3e-08 60.8 46 54.3
BraA06t24637Z Brassica rapa HOM05D003533 ORTHO05D004009 7.3e-08 60.8 46 54.3
Lj4g0015145 Lotus japonicus HOM05D003533 ORTHO05D004009 7.3e-08 60.8 88 38.6
Manes.14G070400 Manihot esculenta HOM05D003533 ORTHO05D004009 7.3e-08 60.8 73 43.8
C08p19120 Brassica napus HOM05D003533 ORTHO05D004009 1.2e-07 60.1 48 52.1
Thhalv10009213m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 2.1e-07 59.3 46 54.3
A09p59550 Brassica napus HOM05D003533 ORTHO05D004009 2.8e-07 58.9 49 46.9
BolC8t49535H Brassica oleracea HOM05D003533 ORTHO05D004009 2.8e-07 58.9 48 52.1
MELO3C017124.2 Cucumis melo HOM05D003533 ORTHO05D004009 2.8e-07 58.9 84 36.9
HanXRQChr09g0237871 Helianthus annuus HOM05D003533 ORTHO05D004009 2.8e-07 58.9 63 49.2
Sp1g16980 Schrenkiella parvula HOM05D003533 ORTHO05D004009 2.8e-07 58.9 48 50.0
TWI15G0955 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.8e-07 58.9 65 47.7
BcaB07g31922 Brassica carinata HOM05D003533 ORTHO05D004009 3.6e-07 58.5 48 50.0
Lsat_1_v5_gn_1_11220 Lactuca sativa HOM05D003533 ORTHO05D004009 3.6e-07 58.5 75 37.3
Sed0002579 Sechium edule HOM05D003533 ORTHO05D004009 3.6e-07 58.5 75 44.0
BcaC07g41276 Brassica carinata HOM05D003533 ORTHO05D004009 4.7e-07 58.2 49 46.9
RcHm_v2.0_Chr4g0444801 Rosa chinensis HOM05D003533 ORTHO05D004009 4.7e-07 58.2 67 41.8
Sc04g0002090 Simmondsia chinensis HOM05D003533 ORTHO05D004009 4.7e-07 58.2 44 52.3
MD06G1181300 Malus domestica HOM05D003533 ORTHO05D004009 6.2e-07 57.8 67 44.8
Phvul.003G196800 Phaseolus vulgaris HOM05D003533 ORTHO05D004009 6.2e-07 57.8 68 45.6
Lsat_1_v5_gn_1_11180 Lactuca sativa HOM05D003533 ORTHO05D004009 8.0e-07 57.4 61 44.3
Manes.06G100300 Manihot esculenta HOM05D003533 ORTHO05D004009 8.0e-07 57.4 70 41.4
FvH4_4g35190 Fragaria vesca HOM05D003533 ORTHO05D004009 1.1e-06 57.0 67 43.3
FAN13G2147 Fragaria x ananassa HOM05D003533 ORTHO05D004009 1.1e-06 57.0 67 44.8
Lsat_1_v5_gn_1_11280 Lactuca sativa HOM05D003533 ORTHO05D004009 1.1e-06 57.0 68 38.2
Sp5g13860 Schrenkiella parvula HOM05D003533 ORTHO05D004009 1.1e-06 57.0 72 38.9
BcaB03g14468 Brassica carinata HOM05D003533 ORTHO05D004009 1.4e-06 56.6 47 51.1
CANSAT54G2961 Cannabis sativa HOM05D003533 ORTHO05D004009 1.4e-06 56.6 69 39.1
Duzib084G0973 Durio zibethinus HOM05D003533 ORTHO05D004009 1.4e-06 56.6 71 40.8
ECA247G3580 Erigeron canadensis HOM05D003533 ORTHO05D004009 1.4e-06 56.6 68 39.7
Migut.L01388 Erythranthe guttata HOM05D003533 ORTHO05D004009 1.4e-06 56.6 64 43.8
Glyma.05G033600 Glycine max HOM05D003533 ORTHO05D004009 1.8e-06 56.2 67 43.3
unitig_22.g6479 Utricularia gibba HOM05D003533 ORTHO05D004009 1.8e-06 56.2 72 37.5
FAN18G0586 Fragaria x ananassa HOM05D003533 ORTHO05D004009 2.3e-06 55.8 69 42.0
TWI81G0654 Tripterygium wilfordii HOM05D003533 ORTHO05D004009 2.3e-06 55.8 68 44.1
FAN12G1992 Fragaria x ananassa HOM05D003533 ORTHO05D004009 3.1e-06 55.5 67 41.8
Glyma.06G186200 Glycine max HOM05D003533 ORTHO05D004009 3.1e-06 55.5 62 51.6
Glyma.17G093500 Glycine max HOM05D003533 ORTHO05D004009 3.1e-06 55.5 47 51.1
Oeu017591.1 Olea europaea HOM05D003533 ORTHO05D004009 3.1e-06 55.5 64 40.6
Prupe.5G179600 Prunus persica HOM05D003533 ORTHO05D004009 3.1e-06 55.5 71 40.8
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.1e-06 55.5 71 40.8
TAR629G1875 Trochodendron aralioides HOM05D003533 ORTHO05D004009 4.0e-06 55.1 65 40.0
CiPaw.12G022900 Carya illinoinensis HOM05D003533 ORTHO05D004009 5.2e-06 54.7 70 40.0
Medtr4g106500 Medicago truncatula HOM05D003533 ORTHO05D004009 5.2e-06 54.7 64 45.3
Nitab4.5_0002059g0100 Nicotiana tabacum HOM05D003533 ORTHO05D004009 5.2e-06 54.7 70 40.0
Thhalv10010873m.g Eutrema salsugineum HOM05D003533 ORTHO05D004009 6.8e-06 54.3 47 46.8
Glyma.04G178500 Glycine max HOM05D003533 ORTHO05D004009 6.8e-06 54.3 62 50.0
Aa31LG4G16780 Aethionema arabicum HOM05D003533 ORTHO05D004009 8.9e-06 53.9 50 44.0
MD14G1187200 Malus domestica HOM05D003533 ORTHO05D004009 8.9e-06 53.9 67 43.3


User provided reference genes

Program Settings