Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 1.8e-85 319.3 170 100.0
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 5.2e-53 211.5 158 74.1
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 7.3e-47 191.0 164 66.5
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 1.6e-38 163.3 161 60.2
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.3e-35 153.7 172 55.2
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 6.4e-35 151.4 113 76.1
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.3e-32 143.7 184 50.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 2.3e-32 142.9 185 49.7
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 2.5e-31 139.4 177 50.3
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 9.5e-31 137.5 166 56.0
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 1.2e-30 137.1 183 50.3
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.1e-30 136.3 183 49.7
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 4.7e-30 135.2 169 52.1
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 4.7e-30 135.2 143 57.3
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 6.2e-30 134.8 182 50.5
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 6.2e-30 134.8 148 57.4
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 8.1e-30 134.4 122 63.9
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 2.3e-29 132.9 161 54.0
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.3e-29 132.9 156 51.3
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 6.8e-29 131.3 163 49.1
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 6.8e-29 131.3 167 48.5
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.5e-28 130.2 183 48.1
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.5e-28 130.2 152 52.0
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 2.0e-28 129.8 151 51.7
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 2.6e-28 129.4 150 54.7
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 5.8e-28 128.3 154 48.7
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 9.9e-28 127.5 141 55.3
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.3e-27 127.1 167 47.9
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 2.2e-27 126.3 174 47.1
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.2e-27 126.3 159 51.6
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 2.9e-27 125.9 185 45.9
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 6.4e-27 124.8 158 50.0
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 6.4e-27 124.8 149 52.3
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 8.4e-27 124.4 126 56.3
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 8.4e-27 124.4 140 54.3
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 1.4e-26 123.6 165 45.5
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.9e-26 123.2 169 46.7
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.9e-26 123.2 126 55.6
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 2.4e-26 122.9 134 53.7
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 2.4e-26 122.9 124 57.3
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.2e-26 122.5 89 71.9
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 4.1e-26 122.1 93 64.5
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 5.4e-26 121.7 136 53.7
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 9.2e-26 120.9 125 55.2
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.2e-25 120.6 138 54.3
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 1.2e-25 120.6 123 55.3
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 2.1e-25 119.8 165 44.8
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 2.7e-25 119.4 119 55.5
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 3.5e-25 119.0 138 52.9
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 6.0e-25 118.2 121 54.5
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 6.0e-25 118.2 107 65.4
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 7.8e-25 117.9 194 41.8
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 3.0e-24 115.9 120 54.2
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 3.0e-24 115.9 159 47.2
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 3.9e-24 115.5 167 45.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 3.9e-24 115.5 183 42.1
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 5.1e-24 115.2 147 51.0
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 6.6e-24 114.8 163 47.9
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 8.6e-24 114.4 153 47.1
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.1e-23 114.0 167 46.1
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.1e-23 114.0 174 45.4
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 1.1e-23 114.0 174 45.4
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.5e-23 112.8 167 46.1
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.5e-23 112.8 140 47.9
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 3.3e-23 112.5 174 44.8
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 4.3e-23 112.1 146 48.6
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 4.3e-23 112.1 122 55.7
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 4.3e-23 112.1 139 46.0
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 7.3e-23 111.3 159 45.9
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.2e-22 110.5 117 57.3
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.2e-22 110.5 144 45.8
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.6e-22 110.2 125 50.4
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 2.1e-22 109.8 154 46.1
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 2.1e-22 109.8 110 57.3
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 2.8e-22 109.4 147 48.3
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 2.8e-22 109.4 164 45.1
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 2.8e-22 109.4 153 47.1
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 4.7e-22 108.6 124 50.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.4e-21 107.1 120 54.2
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 1.4e-21 107.1 118 51.7
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.4e-21 107.1 171 42.7
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.4e-21 107.1 155 45.2
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 5.2e-21 105.1 85 65.9
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 6.9e-21 104.8 161 41.0
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 6.9e-21 104.8 152 45.4
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 1.5e-20 103.6 137 46.0
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 1.3e-19 100.5 135 45.2
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.3e-19 100.5 151 41.7
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.7e-19 100.1 154 41.6
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 4.9e-19 98.6 105 56.2
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 8.4e-19 97.8 154 42.2
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 3.2e-18 95.9 111 52.3
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 3.2e-18 95.9 107 51.4
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 5.4e-18 95.1 123 45.5
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 5.4e-18 95.1 122 47.5
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 9.3e-18 94.4 170 42.9
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.6e-17 93.6 123 44.7
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 6.0e-17 91.7 187 38.5
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.0e-16 90.9 110 49.1
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.3e-16 90.5 86 65.1
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.3e-16 89.7 107 47.7
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 1.5e-15 87.0 92 54.3
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 2.1e-14 83.2 107 48.6
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 6.2e-14 81.6 107 45.8
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 9.0e-13 77.8 149 38.3
Lsat_1_v5_gn_9_86741 Lactuca sativa HOM05D005915 ORTHO05D007239 4.5e-12 75.5 68 61.8
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 7.6e-12 74.7 119 37.8
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.3e-11 73.9 125 41.6
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 3.8e-11 72.4 96 50.0
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 6.4e-11 71.6 56 66.1
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 1.9e-10 70.1 78 56.4
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 4.2e-10 68.9 47 61.7
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 7.1e-10 68.2 85 51.8
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.6e-09 67.0 159 35.2
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 2.1e-09 66.6 110 42.7
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 2.7e-09 66.2 79 49.4
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.8e-08 63.5 82 43.9
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 3.3e-07 59.3 33 78.8
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 9.6e-07 57.8 51 64.7


User provided reference genes

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