Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 1.3e-47 193.0 116 100.0
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 5.0e-47 191.0 115 100.0
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 6.9e-41 170.6 157 72.6
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 1.5e-35 152.9 115 80.0
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 1.2e-29 133.3 115 62.6
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 3.0e-28 128.6 115 60.9
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 2.6e-27 125.6 115 60.9
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 3.3e-27 125.2 117 60.7
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 7.4e-27 124.0 117 65.8
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 9.7e-27 123.6 117 60.7
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 9.7e-27 123.6 117 59.8
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 2.2e-26 122.5 114 60.5
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 2.2e-26 122.5 117 59.8
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 2.8e-26 122.1 115 56.5
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 3.7e-26 121.7 109 60.6
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 8.2e-26 120.6 115 54.8
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 8.2e-26 120.6 112 62.5
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.1e-25 118.6 124 54.8
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 5.3e-25 117.9 116 58.6
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 7.0e-25 117.5 111 61.3
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 7.0e-25 117.5 112 71.4
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 5.9e-24 114.4 116 51.7
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 7.7e-24 114.0 116 51.7
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 7.7e-24 114.0 116 51.7
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 7.7e-24 114.0 116 62.1
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.9e-23 112.1 114 52.6
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 2.9e-23 112.1 115 53.9
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 3.8e-23 111.7 117 52.1
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 3.8e-23 111.7 116 53.4
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 5.0e-23 111.3 114 53.5
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.1e-22 110.2 116 55.2
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 1.5e-22 109.8 115 53.0
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 1.9e-22 109.4 114 50.9
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 2.5e-22 109.0 112 51.8
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 3.2e-22 108.6 116 50.9
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 7.2e-22 107.5 116 50.0
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 7.2e-22 107.5 110 51.8
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.2e-21 106.7 116 50.0
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 1.2e-21 106.7 115 55.7
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.6e-21 106.3 115 53.0
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.1e-21 105.9 114 50.0
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.7e-21 105.5 110 56.4
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 6.1e-21 104.4 107 53.3
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 3.0e-20 102.1 107 53.3
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 4.0e-20 101.7 116 51.7
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 5.2e-20 101.3 119 49.6
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 5.2e-20 101.3 113 49.6
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 8.8e-20 100.5 117 51.3
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 8.8e-20 100.5 118 57.6
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 8.8e-20 100.5 112 53.6
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 1.5e-19 99.8 114 49.1
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.5e-19 99.8 113 54.9
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 2.0e-19 99.4 111 50.5
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 3.4e-19 98.6 121 49.6
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 4.4e-19 98.2 121 47.9
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 4.4e-19 98.2 114 49.1
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 4.4e-19 98.2 116 50.9
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 4.4e-19 98.2 112 53.6
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 9.7e-19 97.1 121 48.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 1.7e-18 96.3 88 60.2
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.7e-18 96.3 113 46.9
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 2.8e-18 95.5 114 60.5
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 6.3e-18 94.4 117 48.7
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.8e-17 92.8 114 51.8
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 4.1e-17 91.7 108 47.2
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 7.0e-17 90.9 122 45.1
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 4.5e-16 88.2 113 59.3
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.5e-16 88.2 100 48.0
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 5.9e-16 87.8 124 41.9
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 1.3e-15 86.7 117 47.0
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 1.3e-15 86.7 114 44.7
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 1.7e-15 86.3 117 46.2
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 2.9e-15 85.5 108 44.4
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 2.9e-15 85.5 108 47.2
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 3.8e-15 85.1 109 45.0
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 6.5e-15 84.3 117 46.2
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.5e-14 83.2 114 45.6
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 1.9e-14 82.8 109 44.0
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 2.5e-14 82.4 108 42.6
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 3.2e-14 82.0 112 45.5
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 3.2e-14 82.0 115 45.2
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 9.4e-14 80.5 119 45.4
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.2e-13 80.1 108 42.6
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 2.7e-13 79.0 111 42.3
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.7e-13 79.0 113 43.4
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 3.6e-13 78.6 108 41.7
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.0e-12 77.0 111 43.2
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.8e-12 76.3 110 46.4
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 2.3e-12 75.9 108 39.8
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 2.3e-12 75.9 108 39.8
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 2.3e-12 75.9 118 40.7
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 4.0e-12 75.1 118 39.8
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.0e-12 75.1 81 55.6
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.4e-11 72.0 79 48.1
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 5.7e-11 71.2 108 37.0
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 7.5e-11 70.9 108 38.9
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 7.5e-11 70.9 117 41.0
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 7.5e-11 70.9 96 52.1
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.7e-10 69.7 49 67.3
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 3.7e-10 68.6 118 44.9
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 8.3e-10 67.4 110 42.7
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.1e-09 67.0 115 37.4
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 1.4e-09 66.6 115 37.4
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.4e-09 66.6 114 38.6
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.8e-09 66.2 115 40.0
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 2.4e-09 65.9 97 43.3
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 3.1e-09 65.5 108 36.1
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 4.1e-09 65.1 108 38.9
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 7.0e-09 64.3 115 39.1
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 1.2e-08 63.5 109 38.5
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 1.6e-08 63.2 114 35.1
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.0e-07 60.5 113 43.4
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 1.3e-07 60.1 115 40.0
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 1.7e-07 59.7 93 43.0
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 2.3e-07 59.3 122 36.9
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 2.9e-07 58.9 108 33.3
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 2.9e-07 58.9 111 37.8
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 8.6e-07 57.4 119 37.8
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.5e-06 56.6 109 32.1
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 2.5e-06 55.8 132 34.8


User provided reference genes

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