Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1661.4 830 100.0
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1471.1 832 88.8
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1441.4 843 86.5
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1388.6 830 84.7
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1352.4 843 81.1
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1317.8 813 81.8
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1316.2 837 80.3
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1314.3 832 80.5
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1311.2 840 79.6
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1309.3 832 80.2
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1308.9 818 81.5
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1303.9 818 81.2
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1303.9 826 81.0
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1303.5 818 80.6
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1303.5 814 80.5
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1302.0 824 80.9
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1301.6 845 78.3
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1301.2 846 77.4
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1300.8 839 78.9
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1300.0 800 82.0
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1298.1 832 79.8
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1297.7 819 80.5
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1297.3 832 79.8
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1297.3 819 80.7
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1295.4 819 80.3
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1294.3 816 79.5
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1293.1 841 78.0
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1290.8 815 80.9
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1290.0 841 77.9
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1286.6 836 78.3
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1283.5 845 77.5
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1283.1 819 79.6
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1282.7 826 79.1
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1282.3 841 77.5
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1281.5 819 79.6
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1280.4 875 75.7
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1280.4 818 79.2
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1278.1 816 79.4
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1277.7 841 78.1
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1276.5 846 76.8
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1276.2 818 79.0
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1275.8 817 78.9
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 836 77.9
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 821 78.7
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1275.4 842 77.3
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1274.6 841 77.9
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1274.2 814 79.1
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1273.5 841 78.0
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1273.1 811 79.9
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1272.3 840 77.5
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1269.6 833 77.7
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1269.2 814 79.2
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1268.4 841 77.5
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1268.4 786 81.7
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1267.7 839 76.9
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1266.9 823 79.0
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 817 78.9
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1266.5 832 77.5
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1265.0 830 78.7
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1265.0 839 77.0
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1265.0 819 78.5
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 830 77.5
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 816 78.2
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 818 78.5
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1261.9 813 77.7
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1261.5 817 78.7
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1261.5 840 77.0
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1261.1 840 76.8
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1261.1 836 76.9
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1260.0 879 73.7
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1259.2 813 78.7
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1259.2 839 76.6
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1257.7 798 79.1
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1257.7 868 75.5
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1254.6 818 78.6
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1253.0 816 77.7
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1251.5 838 77.2
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1251.5 810 79.0
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1250.3 831 76.1
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1249.6 813 78.7
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1249.6 816 77.7
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1248.8 843 75.9
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1245.7 817 77.6
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1245.0 820 77.6
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1244.6 812 77.7
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1242.3 842 76.0
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1241.5 817 77.4
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1239.9 817 76.1
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1239.6 845 75.3
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1236.9 852 71.2
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1233.8 830 76.4
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1233.4 789 78.2
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1232.6 820 76.0
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1229.5 816 76.5
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1229.2 823 75.2
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1224.2 818 77.1
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1223.4 845 74.8
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1220.7 812 76.8
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1218.4 807 76.1
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1218.0 840 74.5
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1214.5 782 79.2
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1213.7 814 76.2
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1212.2 884 71.9
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1211.8 826 74.1
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1211.4 826 74.3
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1210.3 790 78.1
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1209.5 813 76.4
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1209.5 813 76.4
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1209.5 813 76.4
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1209.5 805 75.8
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 837 75.4
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 790 78.1
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1208.4 850 69.2
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1206.4 816 75.0
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1206.0 835 73.7
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1203.0 789 76.9
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1202.6 818 75.2
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1201.0 878 72.3
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1191.8 841 73.6
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1191.4 847 73.4
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1189.5 819 74.5
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1189.5 819 74.5
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1189.5 819 74.5
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1189.5 819 74.5
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1183.7 909 68.2
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 882 69.3
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1174.1 777 76.8
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1171.8 814 73.7
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1167.5 819 73.6
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1162.1 694 83.6
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1157.9 826 72.0
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1146.7 839 72.0
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1142.9 758 77.0
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1138.6 807 71.9
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1137.9 819 70.0
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1120.1 815 72.6
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1112.8 819 69.7
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1111.7 810 70.6
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1104.0 814 69.5
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 0.0e+00 1087.0 737 76.4
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1083.2 757 71.5
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 2.7e-296 1021.9 834 66.5
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 2.2e-269 932.6 614 73.8
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 1.8e-263 912.9 633 68.4
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 5.9e-251 871.3 816 60.4
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 3.6e-248 862.1 538 81.0
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 1.8e-247 859.8 531 79.8
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 6.3e-245 851.3 577 73.0
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 9.0e-175 618.2 709 51.9
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 3.7e-144 516.5 457 58.4
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 4.5e-134 483.0 354 74.6
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 1.4e-127 461.5 330 70.9
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 1.3e-125 454.9 278 81.3
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 5.5e-116 422.9 320 72.8
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.0e-93 349.0 397 51.9
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 6.0e-86 323.2 581 44.1
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 4.0e-58 230.7 156 74.4
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 3.7e-51 207.6 134 73.9
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 4.8e-43 180.6 163 55.8
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 1.7e-40 172.2 477 30.4
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 1.1e-31 142.9 461 26.9
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 1.2e-30 139.4 468 27.1
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 4.4e-28 131.0 76 78.9
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 1.7e-24 119.0 440 27.5
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 1.7e-24 119.0 489 26.4
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 2.9e-24 118.2 63 84.1
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 7.2e-23 113.6 96 62.5
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 3.3e-20 104.8 104 52.9
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 8.2e-19 100.1 63 74.6
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 2.9e-16 91.7 220 32.3
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-15 87.4 217 29.5
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 5.7e-12 77.4 77 51.9
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 4.1e-10 71.2 145 35.2
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-07 63.2 67 47.8
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 5.5e-07 60.8 38 73.7


User provided reference genes

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