Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 2.8e-157 558.5 277 100.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 4.1e-124 448.4 274 82.1
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.7e-123 445.7 280 83.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 5.1e-106 388.3 284 72.2
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.2e-104 383.6 281 71.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 6.2e-104 381.3 294 68.7
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.3e-103 379.4 289 71.3
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 4.0e-103 378.6 294 68.4
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.0e-103 378.6 282 69.1
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.9e-103 377.5 286 70.3
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.5e-102 376.7 286 71.0
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.5e-102 376.7 283 68.9
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.6e-102 375.9 267 71.9
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.6e-102 375.9 226 81.4
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 1.3e-101 373.6 289 68.5
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 2.2e-101 372.9 292 67.5
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.9e-101 372.5 284 68.0
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 4.9e-101 371.7 286 65.4
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.9e-101 371.7 238 79.0
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 4.9e-101 371.7 238 79.0
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 4.9e-101 371.7 278 69.4
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 4.9e-101 371.7 272 71.7
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 6.4e-101 371.3 293 66.9
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 8.4e-101 370.9 285 69.5
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.4e-101 370.9 260 73.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 8.4e-101 370.9 273 68.9
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.1e-100 370.5 287 68.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 1.4e-100 370.2 292 68.5
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.9e-100 369.8 293 66.9
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-100 369.8 291 68.0
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-100 369.8 293 66.9
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.9e-100 369.8 291 68.0
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 2.4e-100 369.4 284 69.7
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 2.4e-100 369.4 247 75.7
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.2e-100 369.0 278 69.8
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.1e-100 368.6 289 67.8
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 5.4e-100 368.2 288 68.1
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 5.4e-100 368.2 289 67.8
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.4e-100 368.2 287 68.6
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 7.1e-100 367.9 278 69.4
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 9.2e-100 367.5 291 67.0
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 1.2e-99 367.1 285 68.1
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.6e-99 366.7 235 78.3
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.1e-99 366.3 282 68.8
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 2.1e-99 366.3 279 67.4
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 3.5e-99 365.5 290 67.9
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.5e-99 365.5 266 71.1
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 3.5e-99 365.5 231 78.8
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.5e-99 365.5 268 72.0
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 3.5e-99 365.5 279 68.8
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 4.6e-99 365.2 285 69.1
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 4.6e-99 365.2 239 75.7
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 7.8e-99 364.4 279 68.8
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.7e-98 363.2 236 76.3
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 1.7e-98 363.2 286 67.5
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.7e-98 363.2 289 66.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 2.3e-98 362.8 292 66.1
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 2.3e-98 362.8 268 69.8
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 3.9e-98 362.1 293 66.2
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 5.1e-98 361.7 302 64.6
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 5.1e-98 361.7 271 69.4
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 5.1e-98 361.7 229 77.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 6.6e-98 361.3 237 75.1
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 6.6e-98 361.3 293 67.6
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.3e-97 359.0 297 66.0
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 5.6e-97 358.2 226 77.4
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 5.6e-97 358.2 262 71.0
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 7.3e-97 357.8 214 82.2
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.6e-96 356.7 229 75.5
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.7e-96 355.1 273 68.9
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 8.1e-96 354.4 341 59.2
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.1e-95 354.0 231 77.1
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.4e-95 353.6 235 73.6
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 3.1e-95 352.4 235 74.5
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 4.0e-95 352.1 323 60.7
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 4.0e-95 352.1 237 73.4
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 5.2e-95 351.7 238 73.1
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 6.8e-95 351.3 229 74.7
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 8.9e-95 350.9 248 70.6
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.2e-94 350.5 284 65.1
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.5e-94 350.1 290 64.1
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.0e-94 349.7 289 66.1
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 5.8e-94 348.2 301 63.1
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.7e-93 346.7 246 72.0
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.2e-93 346.3 273 67.4
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.2e-93 346.3 273 67.4
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.8e-93 345.5 245 72.2
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.4e-93 344.7 273 67.0
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 8.4e-93 344.4 281 65.5
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.9e-92 343.2 232 73.7
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 2.4e-92 342.8 280 63.9
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 7.1e-92 341.3 269 65.4
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 4.6e-91 338.6 239 71.1
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.3e-90 337.0 226 73.5
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 4.8e-88 328.6 368 52.7
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 6.4e-85 318.2 228 68.0
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 1.2e-83 313.9 241 63.9
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 6.6e-82 308.1 207 74.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.5e-78 295.4 291 59.8
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 5.5e-76 288.5 259 60.2
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.6e-75 285.4 197 74.6
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 6.7e-74 281.6 236 59.7
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.4e-71 273.9 202 63.4
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 3.1e-71 272.7 206 63.6
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.6e-67 260.4 215 66.5
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.8e-66 256.9 205 62.4
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.3e-66 256.5 192 65.6
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.7e-66 255.0 219 61.2
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.0e-34 151.4 312 38.8
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 5.2e-34 149.1 202 42.6
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.3e-32 144.4 177 49.2
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 9.1e-31 138.3 214 40.7
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.5e-28 131.0 156 41.7
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.1e-27 127.1 96 69.8
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 2.7e-27 126.7 112 60.7
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 8.8e-26 121.7 92 68.5
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 5.7e-25 119.0 131 46.6
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.4e-09 66.6 120 36.7
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 8.3e-08 62.0 92 44.6


User provided reference genes

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