Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.8e-310 1067.8 529 100.0
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 6.9e-245 850.5 526 79.1
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.4e-244 848.2 528 78.4
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 2.3e-192 676.0 538 61.3
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 2.1e-185 652.9 539 60.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 1.4e-184 650.2 540 60.7
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.0e-183 646.4 541 60.6
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 2.2e-182 642.9 538 58.9
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.1e-181 640.6 540 58.5
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 2.3e-179 632.9 540 59.6
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 2.9e-179 632.5 540 59.4
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 3.8e-179 632.1 540 60.4
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 3.8e-179 632.1 537 58.1
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.8e-179 632.1 537 57.9
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 5.0e-179 631.7 542 59.4
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 6.5e-179 631.3 538 58.0
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 4.2e-178 628.6 537 59.0
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 4.2e-178 628.6 542 58.5
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 7.2e-178 627.9 540 57.8
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.6e-177 626.7 537 57.4
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 3.6e-177 625.5 540 59.1
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 8.0e-177 624.4 540 57.6
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.4e-176 623.6 542 58.9
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 1.8e-176 623.2 542 57.2
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.3e-176 622.9 537 58.1
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.0e-176 622.5 537 58.3
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 5.2e-176 621.7 540 57.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 6.8e-176 621.3 542 57.9
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 8.3e-174 614.4 567 55.6
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 5.4e-173 611.7 535 59.6
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 2.9e-171 605.9 540 56.1
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 2.9e-171 605.9 534 57.7
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 3.8e-171 605.5 534 57.7
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 5.0e-171 605.1 534 57.5
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 8.6e-171 604.4 544 56.1
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.5e-170 603.6 533 57.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 2.5e-170 602.8 539 55.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 5.6e-170 601.7 539 56.8
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 5.6e-170 601.7 536 56.7
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.3e-170 601.3 562 54.4
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 6.1e-169 598.2 540 54.4
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 1.4e-168 597.0 540 54.1
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 1.8e-168 596.7 540 53.7
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.3e-168 596.3 540 53.7
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 4.0e-168 595.5 545 56.0
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 2.2e-166 589.7 539 55.3
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 2.9e-166 589.3 539 56.4
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 6.4e-166 588.2 543 54.7
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 9.2e-165 584.3 545 55.0
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 1.2e-164 583.9 543 54.5
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 1.2e-164 583.9 596 53.4
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 2.0e-164 583.2 543 53.8
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.5e-164 582.4 542 53.5
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 7.8e-164 581.3 542 53.7
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 1.0e-163 580.9 543 54.1
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 6.6e-163 578.2 542 53.0
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.5e-162 577.0 540 53.3
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 2.5e-162 576.2 542 55.2
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 5.6e-162 575.1 542 55.2
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 7.3e-162 574.7 540 53.3
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 2.8e-161 572.8 542 53.0
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 3.6e-161 572.4 542 53.0
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 4.7e-161 572.0 540 53.9
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.8e-160 570.1 630 48.9
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 8.9e-160 567.8 542 53.0
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 2.0e-159 566.6 540 53.1
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 2.0e-159 566.6 540 52.8
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 2.6e-159 566.2 550 54.5
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.3e-158 563.9 537 51.8
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 6.4e-158 561.6 487 56.7
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 8.3e-158 561.2 542 53.5
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 1.4e-157 560.5 540 52.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.9e-157 560.1 572 50.3
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.4e-157 559.7 550 54.4
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 4.1e-157 558.9 483 56.7
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 7.0e-157 558.1 541 53.0
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.3e-155 553.1 475 57.5
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 5.0e-155 552.0 542 49.3
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.5e-154 550.4 537 49.5
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 1.5e-154 550.4 544 53.1
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.9e-154 550.1 537 50.8
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.3e-154 549.3 539 52.7
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.6e-153 547.0 585 50.4
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 4.0e-152 542.3 541 51.0
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.9e-147 525.8 540 50.2
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 6.8e-144 515.0 540 49.1
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.2e-137 494.2 457 50.8
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.8e-137 493.0 446 55.4
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 8.4e-134 481.5 547 47.9
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 3.5e-132 476.1 559 48.1
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.7e-131 473.8 548 47.4
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.7e-131 473.8 432 56.9
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 1.9e-130 470.3 467 51.2
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.8e-128 463.8 553 48.1
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 5.3e-128 462.2 539 49.2
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 7.1e-125 451.8 561 47.1
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 2.3e-123 446.8 473 48.0
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 3.5e-108 396.4 476 43.7
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 3.3e-106 389.8 311 64.0
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 7.4e-98 362.1 400 46.2
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.6e-90 337.0 558 36.6
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 5.5e-85 319.3 559 35.4
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 8.2e-81 305.4 570 35.1
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 9.1e-80 302.0 487 39.4
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 4.0e-75 286.6 572 36.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 3.3e-74 283.5 564 35.8
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 2.0e-71 274.2 218 64.2
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 8.6e-62 242.3 119 95.8
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 2.1e-52 211.1 207 51.7
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 4.9e-49 199.9 249 41.4
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.7e-47 194.1 181 53.0
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 2.8e-36 157.5 108 65.7
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.7e-25 121.7 76 77.6
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-24 118.6 195 38.5
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 1.7e-22 111.7 124 45.2
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 3.0e-14 84.3 104 46.2
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 1.9e-13 81.6 63 63.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 8.4e-09 66.2 57 56.1
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 3.0e-06 57.8 51 58.8


User provided reference genes

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