Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.9e-169 599.0 284 100.0
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.8e-141 505.0 311 76.5
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 3.6e-139 498.4 276 83.7
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.8e-112 409.1 264 69.3
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 4.8e-112 408.3 282 68.4
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 4.8e-112 408.3 246 76.0
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 4.8e-112 408.3 264 69.3
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 4.8e-112 408.3 285 69.8
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.4e-111 406.8 265 70.6
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.8e-111 406.4 286 68.2
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.8e-111 406.4 283 67.8
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.4e-111 404.8 273 69.6
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 7.0e-111 404.4 283 67.8
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.6e-110 403.3 285 66.7
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.5e-110 402.1 286 67.8
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 4.5e-110 401.7 268 69.4
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.0e-109 400.6 283 67.1
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.7e-109 399.8 272 71.0
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 2.2e-109 399.4 282 68.4
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 3.8e-109 398.7 288 66.3
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 6.5e-109 397.9 247 75.3
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 8.5e-109 397.5 283 67.5
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.5e-108 396.7 247 73.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.5e-108 396.0 284 66.9
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 3.2e-108 395.6 286 67.5
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 4.2e-108 395.2 284 65.5
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 5.5e-108 394.8 256 71.5
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 9.4e-108 394.0 286 67.1
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.2e-107 393.7 247 73.3
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.2e-107 393.7 286 65.7
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.6e-107 393.3 286 67.5
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.6e-107 392.1 247 72.9
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 3.6e-107 392.1 268 67.2
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 4.7e-107 391.7 286 65.4
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 6.1e-107 391.3 247 73.3
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.0e-106 390.6 251 70.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.3e-106 389.4 251 70.5
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.0e-106 389.0 278 66.9
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.0e-106 388.7 255 71.4
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 5.2e-106 388.3 282 63.8
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 5.2e-106 388.3 282 63.8
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.8e-106 387.9 283 65.0
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.2e-105 387.1 286 65.0
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.0e-105 386.3 256 68.8
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 2.6e-105 386.0 283 66.1
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 3.4e-105 385.6 285 62.1
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 5.7e-105 384.8 282 63.1
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 9.8e-105 384.0 279 66.7
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.7e-104 383.3 274 63.9
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 2.8e-104 382.5 282 64.5
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 4.9e-104 381.7 283 65.0
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 1.1e-103 380.6 285 63.5
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 1.4e-103 380.2 298 62.4
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 4.1e-103 378.6 225 73.8
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 7.0e-103 377.9 282 62.4
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.2e-102 377.1 221 74.7
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.2e-102 377.1 222 74.8
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.6e-102 376.7 273 67.0
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.6e-102 376.7 283 65.4
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 2.0e-102 376.3 285 64.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 2.7e-102 375.9 275 65.8
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 1.0e-101 374.0 284 62.7
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.7e-101 373.2 247 70.4
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.7e-101 373.2 283 64.0
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.3e-101 372.9 282 64.2
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.3e-101 372.9 286 62.2
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.3e-101 372.9 285 63.2
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.8e-101 372.1 232 72.0
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-101 372.1 243 70.4
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-101 372.1 232 72.0
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-101 372.1 232 72.0
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.8e-101 372.1 232 72.0
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 5.0e-101 371.7 277 63.2
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.1e-100 370.5 233 72.1
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.9e-100 369.8 232 71.1
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.9e-100 369.8 243 70.0
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.9e-100 369.8 233 72.5
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 3.3e-100 369.0 277 63.2
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 7.2e-100 367.9 243 67.9
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 9.5e-100 367.5 288 62.2
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 9.5e-100 367.5 287 61.7
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 1.2e-99 367.1 277 62.5
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.1e-99 366.3 266 64.7
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.1e-99 366.3 281 62.6
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 2.1e-99 366.3 232 71.6
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.8e-99 365.9 231 71.0
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 3.6e-99 365.5 226 71.2
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 4.7e-99 365.2 243 69.5
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 4.7e-99 365.2 233 71.2
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 8.0e-99 364.4 283 62.5
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.0e-98 364.0 205 77.1
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 6.8e-98 361.3 266 63.9
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 6.8e-98 361.3 249 67.1
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 3.4e-97 359.0 243 68.3
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 4.9e-96 355.1 260 64.2
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 1.8e-95 353.2 207 74.4
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 7.0e-95 351.3 290 59.7
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 2.7e-94 349.4 232 69.8
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 7.8e-94 347.8 247 66.0
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 3.0e-93 345.9 191 77.5
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 2.9e-88 329.3 216 67.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 4.9e-88 328.6 283 58.0
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 3.9e-85 318.9 217 66.8
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.6e-83 313.5 226 64.2
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.0e-77 294.3 231 55.8
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 3.0e-77 292.7 209 67.5
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 2.5e-76 289.7 204 66.7
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 5.8e-73 278.5 283 49.8
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-72 277.3 171 73.1
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 8.4e-72 274.6 233 53.2
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.1e-68 264.2 280 46.8
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 5.6e-68 261.9 199 56.8
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 6.8e-66 255.0 146 78.8
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 3.4e-65 252.7 204 52.5
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 1.2e-62 244.2 186 58.1
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.3e-56 224.2 173 57.2
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.7e-54 216.5 228 45.6
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 1.5e-49 200.7 177 59.3
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 2.0e-49 200.3 170 58.2
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 7.1e-47 191.8 232 44.8
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.3e-37 161.0 152 55.3
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 2.5e-28 130.2 148 48.6
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 9.0e-26 121.7 73 71.2
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 2.1e-14 84.0 122 41.0
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 4.7e-14 82.8 54 64.8


User provided reference genes

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