Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 2.9e-163 578.6 300 100.0
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 5.5e-82 308.5 254 67.7
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 2.7e-81 306.2 234 71.8
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 5.7e-71 271.9 229 62.4
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 4.8e-70 268.9 279 55.6
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 4.8e-70 268.9 245 57.6
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 7.0e-69 265.0 279 53.8
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.6e-68 263.8 231 62.8
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 6.5e-67 258.5 292 50.0
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.5e-66 257.3 236 58.1
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 4.2e-66 255.8 248 56.9
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 5.5e-66 255.4 260 53.8
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 7.2e-66 255.0 245 56.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.6e-65 252.7 249 55.8
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 3.6e-65 252.7 231 58.9
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 6.1e-65 251.9 235 57.9
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 6.1e-65 251.9 241 57.3
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.3e-64 250.0 245 55.1
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.3e-64 250.0 230 60.0
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 8.8e-64 248.1 264 54.5
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.5e-63 247.3 249 54.6
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 2.0e-63 246.9 259 52.9
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 2.6e-63 246.5 267 54.3
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 4.4e-63 245.7 251 55.8
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 4.4e-63 245.7 256 53.9
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 4.4e-63 245.7 285 49.8
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.7e-62 243.8 245 53.9
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.2e-62 243.4 225 59.6
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.7e-62 242.7 276 48.9
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 6.3e-62 241.9 231 58.4
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 8.3e-62 241.5 230 57.4
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 8.3e-62 241.5 236 53.4
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.1e-61 241.1 264 53.8
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.8e-61 240.4 245 53.9
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.8e-61 240.4 263 51.3
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.4e-61 240.0 234 57.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 3.1e-61 239.6 241 58.1
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 3.1e-61 239.6 270 50.7
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 4.1e-61 239.2 244 56.6
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 5.4e-61 238.8 327 45.3
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 7.0e-61 238.4 231 53.7
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.6e-60 237.3 233 56.2
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 2.7e-60 236.5 227 55.1
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 2.7e-60 236.5 231 54.1
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 3.5e-60 236.1 231 56.3
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 3.5e-60 236.1 231 52.8
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 7.7e-60 235.0 227 55.1
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 1.0e-59 234.6 234 51.7
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 1.3e-59 234.2 225 55.1
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.7e-59 233.8 307 46.9
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 1.7e-59 233.8 231 52.8
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.7e-59 233.8 234 52.6
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 3.8e-59 232.6 307 47.9
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 5.0e-59 232.3 229 55.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 5.0e-59 232.3 238 53.4
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.1e-58 231.1 230 54.8
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.9e-58 230.3 243 49.8
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.3e-58 229.2 228 51.8
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 4.3e-58 229.2 228 51.8
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 4.3e-58 229.2 227 54.6
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 5.6e-58 228.8 263 46.8
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 5.6e-58 228.8 233 53.6
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 7.3e-58 228.4 232 51.7
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 7.3e-58 228.4 237 51.9
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 9.5e-58 228.0 267 49.4
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 8.0e-57 224.9 290 43.4
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 1.0e-56 224.6 252 48.0
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 2.3e-56 223.4 252 47.6
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 6.8e-56 221.9 235 49.8
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 2.6e-55 219.9 264 48.1
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 3.4e-55 219.5 317 44.2
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 1.3e-54 217.6 223 53.8
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.3e-54 217.6 238 50.4
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 6.4e-54 215.3 262 46.9
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 2.4e-53 213.4 262 49.6
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 4.6e-52 209.1 231 52.8
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.7e-51 207.2 248 46.8
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 2.3e-51 206.8 269 47.2
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.6e-49 200.7 239 51.0
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 2.3e-48 196.8 256 49.6
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 4.9e-46 189.1 239 48.5
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 6.4e-46 188.7 145 64.1
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.4e-45 187.6 250 45.2
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.9e-45 187.2 268 42.5
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.9e-45 187.2 294 40.1
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 3.2e-45 186.4 266 44.7
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 9.2e-45 184.9 237 43.5
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.2e-44 184.5 241 46.1
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 1.6e-44 184.1 227 48.5
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 3.5e-44 183.0 225 44.4
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.5e-42 177.6 273 43.2
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 5.6e-42 175.6 240 44.6
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.1e-40 171.4 278 41.4
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 3.1e-40 169.9 232 47.4
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 2.9e-38 163.3 243 44.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 5.4e-37 159.1 277 36.8
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 6.0e-36 155.6 166 52.4
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 3.9e-35 152.9 233 42.5
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 1.9e-34 150.6 224 43.8
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.7e-27 127.5 156 49.4
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 3.0e-27 126.7 144 48.6
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 3.0e-27 126.7 144 48.6
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 3.9e-27 126.3 188 43.1
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 6.6e-27 125.6 232 34.9
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 5.6e-26 122.5 141 50.4
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 7.3e-26 122.1 90 63.3
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 1.6e-25 120.9 252 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 3.1e-24 116.7 225 35.6
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 3.1e-24 116.7 150 44.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 4.0e-24 116.3 236 33.9
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 1.5e-23 114.4 163 46.6
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 2.4e-21 107.1 139 48.2
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.2e-21 106.7 61 82.0
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 6.0e-20 102.4 165 41.2
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 3.0e-19 100.1 96 51.0
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.9e-18 97.4 61 77.0
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.2e-17 92.4 95 52.6
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 1.1e-16 91.7 227 30.4
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 5.3e-16 89.4 193 36.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.8e-14 83.2 60 70.0
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.3e-11 74.7 71 56.3
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 4.5e-07 59.7 112 37.5


User provided reference genes

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