Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 7.6e-68 260.4 133 100.0
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 8.5e-43 177.2 146 68.5
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.8e-37 159.5 146 63.0
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.5e-34 149.8 143 65.7
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.5e-31 139.8 145 59.3
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 2.8e-30 135.6 144 58.3
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.3e-30 134.4 148 56.8
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 8.3e-30 134.0 144 57.6
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.1e-29 133.7 141 58.2
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 1.8e-29 132.9 146 57.5
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.8e-29 132.9 157 51.6
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 3.1e-29 132.1 146 58.9
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 5.3e-29 131.3 151 54.3
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 1.2e-28 130.2 145 55.9
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.6e-28 129.8 146 57.5
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.6e-28 129.8 145 58.6
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.6e-28 129.8 146 59.6
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 3.5e-28 128.6 145 56.6
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 4.5e-28 128.3 143 56.6
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 5.9e-28 127.9 139 54.7
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 5.9e-28 127.9 143 56.6
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 5.9e-28 127.9 144 56.9
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 7.7e-28 127.5 144 56.9
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 1.3e-27 126.7 148 54.1
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.3e-27 126.7 146 56.8
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.3e-27 126.7 148 54.7
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.3e-27 126.7 145 56.6
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 5.0e-27 124.8 134 56.7
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 8.5e-27 124.0 148 52.7
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 8.5e-27 124.0 147 53.1
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.5e-27 124.0 147 53.1
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.5e-26 123.2 146 54.8
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.9e-26 122.9 141 51.8
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 2.5e-26 122.5 118 58.5
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 2.5e-26 122.5 159 52.8
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 4.2e-26 121.7 145 54.5
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 5.5e-26 121.3 145 51.0
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 7.2e-26 120.9 145 53.1
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.2e-26 120.9 147 52.4
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.2e-26 120.9 147 51.7
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 9.4e-26 120.6 146 50.7
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 9.4e-26 120.6 147 55.8
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 9.4e-26 120.6 145 55.9
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.6e-25 119.8 136 55.9
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 2.1e-25 119.4 149 51.7
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 3.6e-25 118.6 133 57.1
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 3.6e-25 118.6 139 53.2
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 8.0e-25 117.5 146 54.8
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 1.8e-24 116.3 139 54.0
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.8e-24 116.3 146 54.1
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 1.8e-24 116.3 146 54.1
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.8e-24 116.3 147 49.7
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.3e-24 115.9 149 51.7
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 2.3e-24 115.9 113 59.3
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 3.0e-24 115.5 142 54.2
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 3.0e-24 115.5 168 48.2
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 3.0e-24 115.5 88 72.7
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 4.0e-24 115.2 142 50.7
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 6.8e-24 114.4 158 48.1
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 6.8e-24 114.4 146 55.5
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 8.8e-24 114.0 149 47.7
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 1.2e-23 113.6 135 50.4
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.5e-23 113.2 146 53.4
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.5e-23 113.2 150 52.7
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 1.5e-23 113.2 139 52.5
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 2.0e-23 112.8 149 53.0
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 2.0e-23 112.8 149 53.0
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 2.0e-23 112.8 149 53.0
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.0e-23 112.8 155 48.4
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 2.0e-23 112.8 145 53.1
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 2.6e-23 112.5 149 53.0
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 2.6e-23 112.5 141 51.1
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 3.4e-23 112.1 140 52.1
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 4.4e-23 111.7 108 62.0
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 7.5e-23 110.9 149 51.7
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 7.5e-23 110.9 149 52.3
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 9.8e-23 110.5 138 52.9
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 1.7e-22 109.8 111 55.9
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.7e-22 109.8 148 52.0
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.7e-22 109.8 150 52.0
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 2.8e-22 109.0 149 52.3
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 3.7e-22 108.6 148 51.4
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 4.8e-22 108.2 149 50.3
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 4.8e-22 108.2 149 50.3
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 6.3e-22 107.8 148 52.0
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 6.3e-22 107.8 148 52.0
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 8.3e-22 107.5 153 51.6
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 3.1e-21 105.5 164 43.3
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 4.1e-21 105.1 147 48.3
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 7.0e-21 104.4 145 46.9
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 7.0e-21 104.4 165 44.8
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 1.2e-20 103.6 150 50.7
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.7e-20 102.4 147 45.6
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 2.7e-20 102.4 130 48.5
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 2.9e-19 99.0 101 60.4
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 6.6e-19 97.8 129 50.4
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 3.6e-17 92.0 75 64.0
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 3.6e-17 92.0 137 44.5
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 4.0e-16 88.6 120 49.2
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.2e-15 87.0 130 43.1
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 2.6e-15 85.9 115 44.3
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.3e-14 83.6 125 42.4
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 1.6e-12 76.6 121 45.5
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.5e-10 70.1 116 41.4
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 4.3e-10 68.6 129 41.1
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 5.6e-10 68.2 77 49.4
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.2e-09 67.0 124 39.5
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 1.6e-09 66.6 116 44.8
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 3.6e-09 65.5 44 75.0
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.0e-08 63.9 120 40.0
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 1.8e-08 63.2 110 39.1
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 4.0e-08 62.0 56 55.4
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 4.0e-08 62.0 171 36.3
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 2.0e-07 59.7 42 66.7
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 2.6e-07 59.3 143 39.2
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.2e-06 56.2 43 65.1
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 2.9e-06 55.8 43 65.1
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 2.9e-06 55.8 49 61.2
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 8.3e-06 54.3 90 44.4
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 8.3e-06 54.3 117 35.0


User provided reference genes

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