Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr04g0094451 Helianthus annuus HOM05D000068 ORTHO05D000084 4.8e-210 734.2 357 100.0
ECA247G3641 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.1e-116 424.1 354 62.7
Lsat_1_v5_gn_1_37740 Lactuca sativa HOM05D000068 ORTHO05D000084 5.5e-105 385.2 366 60.9
Lsat_1_v5_gn_4_91260 Lactuca sativa HOM05D000068 ORTHO05D000084 1.4e-60 237.7 364 43.1
ECA232G4121 Erigeron canadensis HOM05D000068 ORTHO05D000084 1.5e-54 217.6 363 41.9
Oeu005591.1 Olea europaea HOM05D000068 ORTHO05D000084 8.4e-53 211.8 376 38.8
Potri.001G165000 Populus trichocarpa HOM05D000068 ORTHO05D000084 1.9e-52 210.7 407 37.6
Oeu008520.1 Olea europaea HOM05D000068 ORTHO05D000084 5.1e-50 202.6 359 39.3
HanXRQChr09g0277141 Helianthus annuus HOM05D000068 ORTHO05D000084 6.6e-50 202.2 323 44.0
TAR624G1383 Trochodendron aralioides HOM05D000068 ORTHO05D000084 2.5e-49 200.3 414 37.7
Sopen03g040850 Solanum pennellii HOM05D000068 ORTHO05D000084 1.2e-48 198.0 364 40.7
PGSC0003DMG400022905 Solanum tuberosum HOM05D000068 ORTHO05D000084 1.2e-48 198.0 371 39.6
Solyc03g122050.1 Solanum lycopersicum HOM05D000068 ORTHO05D000084 8.1e-48 195.3 338 40.8
Ciclev10027300m.g Citrus clementina HOM05D000068 ORTHO05D000084 3.1e-47 193.4 412 36.2
CAN.G862.32 Capsicum annuum HOM05D000068 ORTHO05D000084 4.0e-47 193.0 362 40.6
Migut.I01113 Erythranthe guttata HOM05D000068 ORTHO05D000084 5.2e-47 192.6 336 40.8
DCAR_022660 Daucus carota HOM05D000068 ORTHO05D000084 9.0e-47 191.8 422 36.3
Cc04_g00960 Coffea canephora HOM05D000068 ORTHO05D000084 1.3e-45 188.0 374 37.7
Duzib192G0097 Durio zibethinus HOM05D000068 ORTHO05D000084 3.8e-45 186.4 406 37.2
Actinidia24446 Actinidia chinensis HOM05D000068 ORTHO05D000084 3.2e-44 183.3 363 37.5
Glyma.16G011000 Glycine max HOM05D000068 ORTHO05D000084 3.2e-44 183.3 382 38.2
Medtr8g022270 Medicago truncatula HOM05D000068 ORTHO05D000084 7.1e-44 182.2 370 37.6
Phvul.010G126200 Phaseolus vulgaris HOM05D000068 ORTHO05D000084 2.1e-43 180.6 362 36.7
Peaxi162Scf00038g01953 Petunia axillaris HOM05D000068 ORTHO05D000084 3.5e-43 179.9 347 38.0
Aqoxy7G00985 Aquilegia oxysepala HOM05D000068 ORTHO05D000084 4.6e-43 179.5 363 36.9
Psat4g167400 Pisum sativum HOM05D000068 ORTHO05D000084 5.1e-42 176.0 371 35.0
MELO3C024330.2 Cucumis melo HOM05D000068 ORTHO05D000084 8.7e-42 175.3 337 36.8
Prupe.3G036400 Prunus persica HOM05D000068 ORTHO05D000084 1.5e-41 174.5 380 35.8
Ca_04809_v3 Cicer arietinum L. HOM05D000068 ORTHO05D000084 2.5e-41 173.7 365 37.5
CsaV3_7G034200 Cucumis sativus L. HOM05D000068 ORTHO05D000084 1.6e-40 171.0 342 35.7
FAN02G0700 Fragaria x ananassa HOM05D000068 ORTHO05D000084 4.8e-40 169.5 414 32.9
MD17G1149200 Malus domestica HOM05D000068 ORTHO05D000084 4.8e-40 169.5 395 35.9
Thecc.06G126100 Theobroma cacao HOM05D000068 ORTHO05D000084 1.1e-39 168.3 478 31.8
Sed0009277 Sechium edule HOM05D000068 ORTHO05D000084 3.1e-39 166.8 343 37.9
TWI59G1116 Tripterygium wilfordii HOM05D000068 ORTHO05D000084 4.0e-39 166.4 415 34.5
SalBow6G4892 Salvia bowleyana HOM05D000068 ORTHO05D000084 1.2e-38 164.9 364 36.3
FAN14G5739 Fragaria x ananassa HOM05D000068 ORTHO05D000084 2.0e-38 164.1 404 33.2
VMungo0331G1475 Vigna mungo HOM05D000068 ORTHO05D000084 2.0e-38 164.1 371 33.7
ClCG09G001180 Citrullus lanatus HOM05D000068 ORTHO05D000084 2.6e-38 163.7 311 36.0
Eucgr.J02615 Eucalyptus grandis HOM05D000068 ORTHO05D000084 4.5e-38 162.9 370 35.4
FAN05G2869 Fragaria x ananassa HOM05D000068 ORTHO05D000084 4.5e-38 162.9 408 33.8
Manes.11G015600 Manihot esculenta HOM05D000068 ORTHO05D000084 4.5e-38 162.9 422 33.4
FvH4_6g35260 Fragaria vesca HOM05D000068 ORTHO05D000084 5.8e-38 162.5 404 32.9
RcHm_v2.0_Chr2g0146621 Rosa chinensis HOM05D000068 ORTHO05D000084 1.7e-37 161.0 387 36.4
FAN09G4414 Fragaria x ananassa HOM05D000068 ORTHO05D000084 2.9e-37 160.2 404 32.7
MD09G1177100 Malus domestica HOM05D000068 ORTHO05D000084 1.1e-36 158.3 393 34.4
PSO421G0139 Papaver somniferum HOM05D000068 ORTHO05D000084 3.2e-36 156.8 402 35.3
arahy.Tifrunner.gnm1.ann1.WYBN0Q Arachis hypogaea HOM05D000068 ORTHO05D000084 5.1e-34 149.4 316 35.4
Dinv37844 Davidia involucrata HOM05D000068 ORTHO05D000084 5.1e-34 149.4 296 38.9
PGR102G1712 Punica granatum HOM05D000068 ORTHO05D000084 1.1e-33 148.3 448 32.1
arahy.Tifrunner.gnm1.ann1.BB2RVD Arachis hypogaea HOM05D000068 ORTHO05D000084 3.3e-33 146.7 316 34.5
CANSAT56G2908 Cannabis sativa HOM05D000068 ORTHO05D000084 3.3e-33 146.7 339 36.3
ATR0681G187 Amborella trichopoda HOM05D000068 ORTHO05D000084 1.1e-31 141.7 391 32.0
Gorai.011G057300 Gossypium raimondii HOM05D000068 ORTHO05D000084 1.8e-31 141.0 463 30.9
CSS0016291 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D000084 6.9e-31 139.0 337 32.6
CiPaw.01G214900 Carya illinoinensis HOM05D000068 ORTHO05D000084 3.8e-29 133.3 331 35.0
Gohir.D10G053700 Gossypium hirsutum HOM05D000068 ORTHO05D000084 1.1e-28 131.7 354 31.9
TPR.G16671 Trifolium pratense HOM05D000068 ORTHO05D000084 9.3e-28 128.6 275 33.8
Cpa.g.sc25.158 Carica papaya HOM05D000068 ORTHO05D000084 3.9e-26 123.2 342 31.6
Nitab4.5_0002072g0030 Nicotiana tabacum HOM05D000068 ORTHO05D000084 3.7e-24 116.7 325 32.6
Lj9A536T74 Lonicera japonica HOM05D000068 ORTHO05D000084 1.4e-23 114.8 151 47.7
Os03g0181675 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D000084 1.4e-23 114.8 339 32.7
CAN.G946.6 Capsicum annuum HOM05D009195 ORTHO05D000137 4.0e-23 113.2 124 50.0
Actinidia31163 Actinidia chinensis HOM05D000068 ORTHO05D000084 2.6e-22 110.5 251 36.7
CAN.G78.22 Capsicum annuum HOM05D009195 ORTHO05D000137 4.5e-22 109.8 109 53.2
MBI19_g18106_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D000084 7.6e-22 109.0 355 32.4
QL05p003200 Quercus lobata HOM05D000068 ORTHO05D000084 1.0e-21 108.6 127 48.0
Zm00001eb088790 Zea mays HOM05D000068 ORTHO05D000084 1.0e-21 108.6 328 29.9
SalBow6G7254 Salvia bowleyana HOM05D000068 ORTHO05D000084 4.6e-19 99.8 236 35.2
Nitab4.5_0011227g0010 Nicotiana tabacum HOM05D000068 ORTHO05D000084 6.0e-19 99.4 286 33.6
CAN.G763.3 Capsicum annuum HOM05D009195 ORTHO05D000137 9.7e-17 92.0 76 56.6
Lj9C536T16 Lonicera japonica HOM05D000068 ORTHO05D000084 1.6e-16 91.3 162 43.8
COL.COLO4_30822 Corchorus olitorius HOM05D000068 ORTHO05D000084 6.3e-16 89.4 145 40.7
GSVIVG01016706001 Vitis vinifera HOM05D000068 ORTHO05D000084 4.1e-15 86.7 59 69.5
SEGI_04285 Sequoiadendron giganteum HOM05D000068 ORTHO05D000084 9.3e-12 75.5 103 38.8
AagrBONN_evm.TU.Sc2ySwM_344.4897 Anthoceros agrestis HOM05D000068 ORTHO05D000084 2.1e-11 74.3 75 45.3
Zm00001eb360840 Zea mays HOM05D000068 ORTHO05D000084 1.3e-08 65.1 77 37.7
THA.LOC104802118 Tarenaya hassleriana HOM05D000068 ORTHO05D000084 6.9e-07 59.3 97 32.0
Actinidia28906 Actinidia chinensis HOM05D000068 ORTHO05D000084 9.1e-07 58.9 77 40.3
Oeu053681.1 Olea europaea HOM05D000068 ORTHO05D000084 9.1e-07 58.9 87 36.8
Glyma.17G041200 Glycine max HOM05D000068 ORTHO05D000084 1.2e-06 58.5 77 36.4
AagrBONN_evm.TU.Sc2ySwM_117.3853 Anthoceros agrestis HOM05D000068 ORTHO05D000084 2.6e-06 57.4 163 32.5
ECA247G1604 Erigeron canadensis HOM05D000068 ORTHO05D000084 3.4e-06 57.0 73 35.6
Peaxi162Scf00847g00008 Petunia axillaris HOM05D000068 ORTHO05D000084 3.4e-06 57.0 108 34.3
vmacro05708 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 3.4e-06 57.0 78 35.9
Carub.0001s0158 Capsella rubella HOM05D000068 ORTHO05D000084 4.5e-06 56.6 103 31.1
Aqoxy2G01747 Aquilegia oxysepala HOM05D000068 ORTHO05D000084 5.9e-06 56.2 78 37.2
CANSAT80G0311 Cannabis sativa HOM05D000068 ORTHO05D000084 5.9e-06 56.2 70 40.0
DCAR_020814 Daucus carota HOM05D000068 ORTHO05D000084 5.9e-06 56.2 76 36.8
Mapoly0075s0053 Marchantia polymorpha HOM05D000068 ORTHO05D000084 7.7e-06 55.8 108 31.5
Medtr1g063170 Medicago truncatula HOM05D000068 ORTHO05D000084 7.7e-06 55.8 74 40.5
Hund20363 Selenicereus undatus HOM05D000068 ORTHO05D000084 7.7e-06 55.8 79 39.2
Thecc.04G079200 Theobroma cacao HOM05D000068 ORTHO05D000084 7.7e-06 55.8 75 38.7


User provided reference genes

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