Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 0.0e+00 1234.9 618 100.0
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 3.3e-299 1031.2 615 79.2
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 4.6e-285 984.2 578 79.2
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 5.2e-276 954.1 575 77.6
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 9.1e-273 943.3 572 76.9
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 4.5e-272 941.0 572 76.9
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 5.0e-271 937.6 574 76.5
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 1.2e-269 932.9 572 76.6
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 4.7e-269 931.0 572 76.2
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 8.0e-269 930.2 577 73.7
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.8e-268 929.1 577 73.5
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.2e-267 926.4 599 73.8
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 1.2e-267 926.4 586 73.7
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 4.4e-267 924.5 579 73.4
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 7.5e-267 923.7 583 73.8
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 7.5e-267 923.7 610 72.3
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 9.7e-267 923.3 577 73.0
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 1.3e-266 922.9 576 73.4
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.2e-266 922.2 582 73.7
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 6.3e-266 920.6 583 73.2
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 8.2e-266 920.2 575 74.6
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 1.4e-265 919.5 578 72.8
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 1.4e-265 919.5 576 74.0
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 5.3e-265 917.5 573 74.0
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 7.0e-265 917.1 574 73.7
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 2.0e-264 915.6 575 75.0
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 1.0e-263 913.3 574 73.7
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 2.9e-263 911.8 576 73.4
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 5.0e-263 911.0 571 73.7
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.1e-262 909.8 578 72.1
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 1.5e-262 909.4 580 72.2
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 3.2e-262 908.3 576 73.8
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 4.2e-262 907.9 576 73.4
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 9.4e-262 906.7 582 72.9
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.6e-261 906.0 582 73.5
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 1.6e-261 906.0 586 72.7
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.0e-260 903.3 583 72.7
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 3.0e-260 901.7 574 73.2
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 4.0e-260 901.4 581 72.6
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 7.5e-259 897.1 569 73.8
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 9.8e-259 896.7 586 71.8
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 3.7e-258 894.8 586 71.3
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 6.3e-258 894.0 597 70.0
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.1e-257 893.3 582 71.8
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 1.8e-257 892.5 571 71.8
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.8e-257 892.5 571 71.6
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 3.1e-257 891.7 584 71.2
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 3.1e-257 891.7 661 65.1
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 4.1e-257 891.3 581 73.0
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.2e-256 889.8 590 71.9
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.7e-256 888.6 571 71.5
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.7e-256 888.6 571 71.5
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 3.5e-256 888.3 580 71.0
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 3.5e-256 888.3 579 72.2
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 3.8e-255 884.8 577 71.9
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 5.0e-255 884.4 576 71.5
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 9.5e-254 880.2 571 71.1
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.6e-253 879.4 579 71.7
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.1e-253 879.0 575 72.0
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 1.4e-252 876.3 577 70.2
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 1.2e-251 873.2 570 71.4
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 2.0e-251 872.5 577 70.9
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.7e-250 868.2 574 71.3
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 8.3e-250 867.1 574 69.7
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 4.5e-248 861.3 588 68.7
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 5.0e-247 857.8 576 70.5
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 2.1e-245 852.4 532 73.9
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 6.1e-245 850.9 578 69.2
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 2.3e-244 849.0 577 70.2
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 5.7e-243 844.3 573 69.6
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 7.5e-243 844.0 572 69.6
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 4.9e-242 841.3 569 69.8
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.1e-238 830.1 534 72.1
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 8.0e-237 823.9 585 68.0
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 5.8e-235 817.8 574 68.6
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 2.0e-232 809.3 573 66.3
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 2.3e-231 805.8 530 70.4
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.3e-231 805.8 573 68.2
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 1.1e-230 803.5 575 66.6
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.1e-230 803.5 568 66.7
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 3.3e-230 802.0 580 66.9
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.6e-229 799.7 551 68.4
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.2e-227 793.5 583 66.2
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 1.5e-227 793.1 580 66.6
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 2.0e-227 792.7 580 66.7
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 8.3e-226 787.3 584 65.9
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 8.3e-226 787.3 584 65.9
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 1.1e-225 786.9 576 66.1
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 3.0e-215 752.3 575 62.4
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 1.3e-210 736.9 607 60.3
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 9.3e-209 730.7 572 62.9
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.4e-201 706.8 569 59.9
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 2.8e-189 666.0 575 57.7
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 1.4e-188 663.7 543 58.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 1.5e-182 643.7 580 55.0
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 1.5e-182 643.7 573 56.0
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.9e-174 616.7 469 62.0
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 5.9e-171 605.1 590 52.5
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 9.4e-169 597.8 590 52.0
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 7.9e-168 594.7 373 73.5
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 7.7e-163 578.2 574 49.7
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 3.0e-143 513.1 518 53.1
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 1.0e-122 444.9 256 81.2
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 1.4e-92 344.7 210 76.7
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 4.2e-76 290.0 186 72.0
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 8.7e-66 255.8 179 68.2
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.3e-64 251.9 194 60.8
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 4.4e-49 200.3 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.2e-43 182.2 132 61.4
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.2e-27 129.0 65 86.2
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 2.3e-26 124.8 113 50.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 3.0e-26 124.4 80 76.2
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 2.0e-25 121.7 65 83.1
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 9.8e-17 92.8 71 62.0
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 4.9e-16 90.5 133 42.1
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.3e-13 82.4 37 97.3
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.9e-13 80.9 43 88.4
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 3.6e-11 74.3 39 84.6
Zm00001eb027230 Zea mays HOM05D006696 ORTHO05D008683 9.2e-07 59.7 63 57.1


User provided reference genes

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