Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 0.0e+00 1138.3 573 100.0
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 2.3e-222 775.8 652 65.3
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 1.3e-220 770.0 648 61.7
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 8.3e-220 767.3 654 62.4
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 3.5e-218 761.9 653 61.9
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 7.8e-218 760.8 637 65.5
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 7.8e-218 760.8 655 61.8
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 1.7e-217 759.6 650 65.4
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 2.3e-217 759.2 641 65.4
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 8.6e-217 757.3 657 60.6
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 1.1e-216 756.9 652 60.3
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 1.1e-216 756.9 652 60.3
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 5.6e-216 754.6 648 61.9
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 8.0e-215 750.7 650 62.2
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.8e-214 749.6 652 60.4
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 3.0e-214 748.8 647 61.7
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 6.8e-214 747.7 647 61.7
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 1.2e-213 746.9 656 61.4
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 1.2e-213 746.9 637 60.6
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 1.5e-213 746.5 527 70.8
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 2.0e-213 746.1 652 60.3
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.0e-213 746.1 652 60.3
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 3.4e-213 745.3 644 61.0
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 4.4e-213 745.0 651 63.0
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 7.5e-213 744.2 652 59.7
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 7.5e-213 744.2 652 59.7
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.3e-212 743.4 652 60.1
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 1.3e-212 743.4 643 61.0
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 1.3e-212 743.4 644 60.6
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 1.7e-212 743.0 671 60.1
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 1.7e-212 743.0 641 62.6
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 2.9e-212 742.3 662 61.3
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 4.9e-212 741.5 651 59.6
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 4.9e-212 741.5 651 60.4
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.4e-212 741.1 652 60.0
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.1e-211 740.3 635 60.9
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.1e-211 740.3 652 59.7
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 1.1e-211 740.3 662 61.2
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 2.4e-211 739.2 651 60.1
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 1.2e-210 736.9 568 65.3
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 3.5e-210 735.3 667 61.6
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 3.5e-210 735.3 652 59.7
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 1.0e-209 733.8 663 59.7
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 1.3e-209 733.4 652 60.6
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 2.3e-209 732.6 655 59.5
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 2.3e-209 732.6 549 66.5
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 3.0e-209 732.3 558 65.1
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 6.6e-209 731.1 671 61.7
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 6.6e-209 731.1 653 59.1
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 1.9e-208 729.6 653 62.2
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 4.3e-208 728.4 553 66.2
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 1.2e-207 726.9 658 58.7
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 8.0e-207 724.2 647 62.1
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 2.3e-206 722.6 667 60.0
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 5.2e-206 721.5 559 64.0
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 4.4e-205 718.4 652 60.3
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 7.5e-205 717.6 541 67.5
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 1.7e-204 716.5 657 58.6
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 3.7e-204 715.3 557 63.9
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 6.4e-204 714.5 594 63.3
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 1.4e-203 713.4 556 64.2
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 4.1e-203 711.8 550 63.8
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 2.0e-202 709.5 631 60.5
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 3.5e-202 708.8 545 65.7
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 7.8e-202 707.6 600 61.7
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 2.3e-201 706.1 657 58.8
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 5.0e-201 704.9 658 58.2
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 1.5e-200 703.4 666 56.8
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 2.5e-200 702.6 660 58.3
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 3.3e-200 702.2 541 66.2
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 3.3e-200 702.2 665 61.4
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 4.3e-200 701.8 541 66.4
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 9.5e-200 700.7 557 63.9
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 9.5e-200 700.7 557 63.9
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 9.5e-200 700.7 549 64.1
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 2.8e-199 699.1 553 63.7
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 5.2e-198 694.9 537 64.6
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 5.2e-198 694.9 550 63.6
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 2.0e-197 693.0 652 58.6
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 2.0e-197 693.0 657 57.4
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 2.0e-197 693.0 652 58.6
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 2.0e-197 693.0 652 58.6
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 4.4e-197 691.8 646 58.2
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 1.7e-196 689.9 655 57.9
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 2.9e-196 689.1 646 58.0
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 6.4e-196 688.0 655 57.4
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 1.9e-195 686.4 640 59.8
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 6.0e-194 681.4 537 63.9
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 3.9e-193 678.7 563 62.7
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 6.6e-193 677.9 517 68.5
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 8.6e-193 677.6 624 59.3
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 2.5e-192 676.0 656 58.5
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 7.3e-192 674.5 640 57.2
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 7.3e-192 674.5 604 62.6
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 1.2e-191 673.7 549 63.9
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 1.6e-191 673.3 667 55.3
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 4.7e-191 671.8 559 63.1
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 2.4e-190 669.5 559 62.8
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 5.2e-190 668.3 655 56.9
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 1.7e-188 663.3 578 60.7
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 7.1e-187 657.9 552 61.2
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 7.8e-186 654.4 572 60.8
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 5.1e-185 651.7 664 53.3
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 1.9e-184 649.8 635 56.9
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 3.3e-184 649.0 552 60.0
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 7.3e-184 647.9 635 56.7
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 7.3e-184 647.9 635 56.7
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 3.1e-182 642.5 552 60.1
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 1.3e-180 637.1 626 54.5
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 8.4e-180 634.4 546 60.4
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 4.2e-179 632.1 527 62.4
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 2.1e-178 629.8 640 54.5
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 8.7e-177 624.4 633 55.1
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 1.9e-176 623.2 635 55.1
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.3e-172 610.5 619 58.3
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 6.4e-172 608.2 657 52.7
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 6.2e-167 591.7 652 52.8
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 1.3e-159 567.4 568 55.1
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 5.3e-158 562.0 549 55.0
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 9.0e-158 561.2 566 54.1
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 8.5e-148 528.1 579 50.4
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 1.0e-145 521.2 656 47.3
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 1.0e-137 494.6 442 58.6
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 2.3e-137 493.4 423 59.6
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 3.8e-132 476.1 528 50.9
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 4.7e-130 469.2 420 59.8
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 1.0e-129 468.0 487 59.8
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 8.0e-122 441.8 557 44.2
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 5.7e-112 409.1 337 60.8
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 4.1e-110 402.9 379 53.8
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 1.0e-105 388.3 382 51.8
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.7e-87 327.8 286 58.7
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 5.8e-80 302.8 337 51.6
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 1.3e-71 275.0 344 48.8
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 1.0e-60 238.8 502 32.9
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 1.2e-53 215.3 584 29.5
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 1.4e-49 201.8 211 49.3
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 1.2e-40 172.2 140 61.4
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 1.3e-34 152.1 164 48.8
BcaNung07137 Brassica carinata HOM05D004961 ORTHO05D006258 3.7e-26 124.0 77 76.6
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 2.4e-25 121.3 295 30.2
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 4.1e-25 120.6 195 43.6
AagrBONN_evm.TU.Sc2ySwM_344.1101 Anthoceros agrestis HOM05D004961 ORTHO05D006258 3.3e-19 100.9 189 32.8
BcaNung07139 Brassica carinata HOM05D004961 ORTHO05D006258 5.7e-19 100.1 95 54.7
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 7.2e-14 83.2 136 37.5
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 1.2e-13 82.4 45 77.8
HanXRQChr12g0366651 Helianthus annuus HOM05D001845 ORTHO05D001878 1.1e-09 69.3 58 63.8
unitig_8.g3389 Utricularia gibba HOM05D004961 ORTHO05D006258 1.1e-09 69.3 152 34.9


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