Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 3.1e-136 488.4 239 100.0
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 4.0e-99 365.2 228 78.1
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.2e-95 353.6 226 76.5
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 5.9e-79 298.1 166 79.5
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.3e-78 297.0 167 79.6
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 2.1e-76 289.7 166 77.7
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 2.8e-76 289.3 169 76.3
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 3.0e-75 285.8 173 74.0
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 3.0e-75 285.8 167 77.2
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 4.0e-75 285.4 223 62.3
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 8.9e-75 284.3 167 76.6
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 1.2e-74 283.9 165 77.0
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.2e-74 283.9 167 76.6
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 2.0e-74 283.1 174 74.7
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 2.0e-74 283.1 194 71.6
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.6e-74 282.7 172 75.6
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 2.6e-74 282.7 167 75.4
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 1.3e-73 280.4 166 72.9
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.7e-73 280.0 230 61.3
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 1.7e-73 280.0 230 61.3
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 2.2e-73 279.6 216 62.5
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 2.9e-73 279.3 214 61.7
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.8e-72 276.6 222 64.0
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 4.1e-72 275.4 170 72.9
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 4.1e-72 275.4 174 71.8
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 5.4e-72 275.0 174 71.8
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 1.6e-71 273.5 175 72.0
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 2.7e-71 272.7 174 71.3
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.7e-71 272.7 224 60.3
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 4.6e-71 271.9 163 77.3
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 1.3e-70 270.4 191 66.5
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 2.3e-70 269.6 172 72.7
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 2.3e-70 269.6 227 58.6
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 3.0e-70 269.2 185 67.0
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 3.9e-70 268.9 217 59.9
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 8.6e-70 267.7 163 71.8
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 1.9e-69 266.5 170 73.5
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 5.6e-69 265.0 226 60.2
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 9.5e-69 264.2 165 72.1
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 1.6e-68 263.5 165 70.3
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 2.1e-68 263.1 199 63.3
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.8e-68 262.7 162 72.2
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.8e-68 262.7 221 59.7
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 2.8e-68 262.7 226 58.4
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.8e-67 260.0 221 58.8
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 2.3e-67 259.6 222 56.8
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.3e-67 259.6 222 56.8
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 2.3e-67 259.6 168 70.8
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 3.1e-67 259.2 175 69.7
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 3.1e-67 259.2 164 70.7
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 6.8e-67 258.1 172 65.7
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.5e-66 256.9 222 56.3
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 7.5e-66 254.6 214 56.1
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 1.3e-65 253.8 166 68.7
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 1.7e-65 253.4 162 70.4
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 6.4e-65 251.5 166 66.9
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 8.3e-65 251.1 203 60.1
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 1.1e-64 250.8 166 66.3
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 3.2e-64 249.2 164 67.7
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 3.2e-64 249.2 172 66.9
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 4.1e-64 248.8 163 69.9
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 9.2e-64 247.7 164 67.1
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 9.2e-64 247.7 164 67.1
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 9.2e-64 247.7 164 67.1
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 9.2e-64 247.7 164 67.1
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 9.2e-64 247.7 164 67.1
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 1.6e-63 246.9 166 68.1
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 2.0e-63 246.5 164 67.1
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 2.7e-63 246.1 164 64.6
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 2.7e-63 246.1 192 60.9
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 1.1e-61 240.7 164 65.9
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 2.5e-61 239.6 168 63.7
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 4.3e-61 238.8 164 65.9
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 5.6e-61 238.4 164 65.9
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 9.5e-61 237.7 164 65.2
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 9.5e-61 237.7 166 65.1
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 9.5e-61 237.7 180 62.8
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 1.2e-60 237.3 145 71.7
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.2e-60 237.3 176 65.3
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 8.1e-60 234.6 172 62.2
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 2.3e-59 233.0 167 65.3
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 3.1e-59 232.6 208 55.8
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 1.5e-58 230.3 175 58.9
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 3.4e-58 229.2 165 63.6
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 3.7e-57 225.7 222 53.2
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.3e-54 216.5 125 74.4
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 1.8e-51 206.8 322 37.9
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 4.1e-48 195.7 120 76.7
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 3.5e-47 192.6 105 80.0
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 5.1e-46 188.7 105 79.0
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 2.6e-42 176.4 109 73.4
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 7.1e-40 168.3 164 52.4
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 7.1e-40 168.3 158 51.3
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 4.8e-36 155.6 219 44.7
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 2.0e-26 123.6 77 71.4
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 3.4e-26 122.9 89 59.6
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 1.3e-25 120.9 91 53.8
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 4.6e-23 112.5 117 45.3
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 6.9e-19 98.6 157 38.2
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 5.8e-18 95.5 132 40.2
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 9.3e-16 88.2 67 59.7
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 9.3e-16 88.2 158 36.1
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 7.9e-15 85.1 41 87.8
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 1.2e-10 71.2 121 35.5


User provided reference genes

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