Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0092011 Helianthus annuus HOM05D005225 ORTHO05D006830 4.3e-289 997.3 503 100.0
HanXRQChr12g0375111 Helianthus annuus HOM05D005225 ORTHO05D006830 1.6e-275 952.2 506 96.0
ECA246G3793 Erigeron canadensis HOM05D005225 ORTHO05D006830 5.0e-245 850.9 505 84.2
Lsat_1_v5_gn_3_53701 Lactuca sativa HOM05D005225 ORTHO05D006830 5.2e-234 814.3 506 80.2
Dinv34052 Davidia involucrata HOM05D005225 ORTHO05D006830 8.6e-213 743.8 508 74.4
Rhsim09G0126000 Rhododendron simsii HOM05D005225 ORTHO05D006830 9.8e-209 730.3 496 72.2
Thecc.02G327800 Theobroma cacao HOM05D005225 ORTHO05D006830 2.2e-208 729.2 506 71.7
CSS0003869 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 2.9e-208 728.8 508 71.7
CAN.G707.21 Capsicum annuum HOM05D005225 ORTHO05D006830 4.9e-208 728.0 508 70.9
Ciclev10031260m.g Citrus clementina HOM05D005225 ORTHO05D006830 1.4e-207 726.5 508 71.9
RcHm_v2.0_Chr7g0212391 Rosa chinensis HOM05D005225 ORTHO05D006830 1.9e-207 726.1 508 71.5
Prupe.1G566200 Prunus persica HOM05D005225 ORTHO05D006830 2.4e-207 725.7 506 71.9
MD16G1281400 Malus domestica HOM05D005225 ORTHO05D006830 7.1e-207 724.2 480 74.6
Cpa.g.sc1.153 Carica papaya HOM05D005225 ORTHO05D006830 9.2e-207 723.8 490 72.4
Cfa008863 Carpinus fangiana HOM05D005225 ORTHO05D006830 9.2e-207 723.8 498 70.7
vmacro01311 Vaccinium macrocarpon HOM05D005225 ORTHO05D006830 1.6e-206 723.0 485 73.8
Lj3P1029T28 Lonicera japonica HOM05D005225 ORTHO05D006830 2.1e-206 722.6 477 74.4
Atru.chr11.1603 Acer truncatum HOM05D005225 ORTHO05D006830 6.0e-206 721.1 506 71.1
Duzib251G0330 Durio zibethinus HOM05D005225 ORTHO05D006830 1.0e-205 720.3 506 70.9
Cc11_g11810 Coffea canephora HOM05D005225 ORTHO05D006830 2.3e-205 719.2 504 70.2
Haze_11886 Corylus avellana HOM05D005225 ORTHO05D006830 2.3e-205 719.2 480 72.7
Hund25165 Selenicereus undatus HOM05D005225 ORTHO05D006830 1.9e-204 716.1 509 70.3
PGSC0003DMG400028362 Solanum tuberosum HOM05D005225 ORTHO05D006830 2.5e-204 715.7 508 70.3
COL.COLO4_27858 Corchorus olitorius HOM05D005225 ORTHO05D006830 3.3e-204 715.3 480 72.3
Sopen05g006880 Solanum pennellii HOM05D005225 ORTHO05D006830 3.3e-204 715.3 508 69.9
QL03p073750 Quercus lobata HOM05D005225 ORTHO05D006830 4.7e-203 711.4 498 70.1
FvH4_4g10620 Fragaria vesca HOM05D005225 ORTHO05D006830 8.1e-203 710.7 505 69.3
FAN12G0824 Fragaria x ananassa HOM05D005225 ORTHO05D006830 8.1e-203 710.7 505 69.5
Sabra08G0073600 Salix brachista HOM05D005225 ORTHO05D006830 1.1e-202 710.3 506 70.0
Potri.008G097400 Populus trichocarpa HOM05D005225 ORTHO05D006830 5.2e-202 708.0 506 69.6
Lalb_Chr04g0255551 Lupinus albus HOM05D005225 ORTHO05D006830 8.9e-202 707.2 506 68.8
FAN12G2267 Fragaria x ananassa HOM05D005225 ORTHO05D006830 1.2e-201 706.8 505 69.3
QL02p092646 Quercus lobata HOM05D005225 ORTHO05D006830 1.2e-201 706.8 498 69.5
Peaxi162Scf00175g00052 Petunia axillaris HOM05D005225 ORTHO05D006830 5.8e-201 704.5 484 70.5
PSO017G1582 Papaver somniferum HOM05D005225 ORTHO05D006830 7.6e-201 704.1 507 70.2
Manes.10G001000 Manihot esculenta HOM05D005225 ORTHO05D006830 2.2e-200 702.6 506 68.6
Gorai.008G176100 Gossypium raimondii HOM05D005225 ORTHO05D006830 2.9e-200 702.2 506 69.0
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla HOM05D005225 ORTHO05D006830 2.9e-200 702.2 509 69.9
CANSAT80G1664 Cannabis sativa HOM05D005225 ORTHO05D006830 3.8e-200 701.8 506 68.4
PGR102G0586 Punica granatum HOM05D005225 ORTHO05D006830 4.9e-200 701.4 506 68.6
MELO3C020077.2 Cucumis melo HOM05D005225 ORTHO05D006830 8.4e-200 700.7 502 68.1
Eucgr.F03034 Eucalyptus grandis HOM05D005225 ORTHO05D006830 8.4e-200 700.7 509 69.4
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea HOM05D005225 ORTHO05D006830 1.1e-199 700.3 483 69.6
Migut.L01174 Erythranthe guttata HOM05D005225 ORTHO05D006830 1.1e-199 700.3 511 67.7
Ah.03g138790 Amaranthus hybridus HOM05D005225 ORTHO05D006830 1.9e-199 699.5 507 68.0
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea HOM05D005225 ORTHO05D006830 4.1e-199 698.4 485 69.9
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea HOM05D005225 ORTHO05D006830 9.2e-199 697.2 483 70.0
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea HOM05D005225 ORTHO05D006830 9.2e-199 697.2 483 69.6
DCAR_004043 Daucus carota HOM05D005225 ORTHO05D006830 3.5e-198 695.3 466 73.6
SalBow2G3373 Salvia bowleyana HOM05D005225 ORTHO05D006830 3.5e-198 695.3 508 68.1
TWI75G0045 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 4.6e-198 694.9 508 67.9
Sed0018680 Sechium edule HOM05D005225 ORTHO05D006830 6.0e-198 694.5 504 66.5
Sc04g0007480 Simmondsia chinensis HOM05D005225 ORTHO05D006830 6.0e-198 694.5 508 69.5
Medtr5g044980 Medicago truncatula HOM05D005225 ORTHO05D006830 1.0e-197 693.7 505 66.9
Nn8g41224 Nelumbo nucifera HOM05D005225 ORTHO05D006830 1.0e-197 693.7 476 72.5
CsaV3_5G008630 Cucumis sativus L. HOM05D005225 ORTHO05D006830 3.0e-197 692.2 502 66.7
VMungo1215G0332 Vigna mungo HOM05D005225 ORTHO05D006830 3.0e-197 692.2 506 68.8
Lj2g0003273 Lotus japonicus HOM05D005225 ORTHO05D006830 2.5e-196 689.1 506 67.4
TPR.G23155 Trifolium pratense HOM05D005225 ORTHO05D006830 3.3e-196 688.7 505 67.7
Psat2g131720 Pisum sativum HOM05D005225 ORTHO05D006830 7.3e-196 687.6 480 70.4
Glyma.02G120400 Glycine max HOM05D005225 ORTHO05D006830 1.2e-195 686.8 483 70.2
TWI79G0826 Tripterygium wilfordii HOM05D005225 ORTHO05D006830 1.6e-195 686.4 508 66.1
MBI16_g03095_MAGBIO Magnolia biondii HOM05D005225 ORTHO05D006830 2.8e-195 685.6 509 66.8
ClCG11G000950 Citrullus lanatus HOM05D005225 ORTHO05D006830 1.4e-194 683.3 470 69.6
Ca_05000_v3 Cicer arietinum L. HOM05D005225 ORTHO05D006830 1.8e-194 682.9 505 66.3
AUR62003082 Chenopodium quinoa HOM05D005225 ORTHO05D006830 3.1e-194 682.2 508 66.5
TPR.G23738 Trifolium pratense HOM05D005225 ORTHO05D006830 3.1e-194 682.2 505 67.3
MSTRG.7736 Avicennia marina HOM05D005225 ORTHO05D006830 6.9e-194 681.0 508 66.9
Nitab4.5_0007734g0040 Nicotiana tabacum HOM05D005225 ORTHO05D006830 9.3e-191 670.6 441 74.4
Nitab4.5_0000231g0060 Nicotiana tabacum HOM05D005225 ORTHO05D006830 7.8e-190 667.5 441 73.7
GSVIVG01012238001 Vitis vinifera HOM05D005225 ORTHO05D006830 5.1e-189 664.8 506 66.4
THA.LOC104821999 Tarenaya hassleriana HOM05D005225 ORTHO05D006830 9.6e-188 660.6 502 64.9
Lalb_Chr10g0098931 Lupinus albus HOM05D005225 ORTHO05D006830 1.1e-186 657.1 498 66.9
Aa31LG2G20560 Aethionema arabicum HOM05D005225 ORTHO05D006830 1.8e-186 656.4 482 64.7
CiPaw.06G093200 Carya illinoinensis HOM05D005225 ORTHO05D006830 3.1e-186 655.6 439 71.8
BraA01t00759Z Brassica rapa HOM05D005225 ORTHO05D006830 6.9e-186 654.4 472 66.5
AT4G30000 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 3.4e-185 652.1 497 64.4
AL7G22240 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 4.5e-185 651.7 497 64.4
Thhalv10019460m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 4.5e-185 651.7 466 67.4
Aqoxy6G03037 Aquilegia oxysepala HOM05D005225 ORTHO05D006830 7.6e-185 651.0 441 70.3
A01p08120 Brassica napus HOM05D005225 ORTHO05D006830 7.6e-185 651.0 472 66.3
CARHR237920 Cardamine hirsuta HOM05D005225 ORTHO05D006830 2.9e-184 649.0 497 64.0
EL10Ac6g15018 Beta vulgaris HOM05D005225 ORTHO05D006830 8.4e-184 647.5 476 67.9
BcaC09g51778 Brassica carinata HOM05D005225 ORTHO05D006830 1.1e-183 647.1 485 64.9
C01p09090 Brassica napus HOM05D005225 ORTHO05D006830 1.1e-183 647.1 485 64.9
BolC1t00900H Brassica oleracea HOM05D005225 ORTHO05D006830 1.1e-183 647.1 485 64.9
Oeu055095.2 Olea europaea HOM05D005225 ORTHO05D006830 1.4e-183 646.7 441 73.0
Sp7g27800 Schrenkiella parvula HOM05D005225 ORTHO05D006830 3.2e-183 645.6 497 63.2
Carub.0007s1065 Capsella rubella HOM05D005225 ORTHO05D006830 5.4e-183 644.8 477 64.8
Sp5g24250 Schrenkiella parvula HOM05D005225 ORTHO05D006830 7.1e-183 644.4 479 64.7
unitig_22.g6894 Utricularia gibba HOM05D005225 ORTHO05D006830 7.1e-183 644.4 503 64.4
Thhalv10024845m.g Eutrema salsugineum HOM05D005225 ORTHO05D006830 1.2e-182 643.7 498 63.5
Gohir.A12G160100 Gossypium hirsutum HOM05D005225 ORTHO05D006830 1.2e-182 643.7 506 64.8
AT1G69190 Arabidopsis thaliana HOM05D005225 ORTHO05D006830 6.0e-182 641.3 467 66.0
ATR0827G107 Amborella trichopoda HOM05D005225 ORTHO05D006830 1.9e-180 636.3 472 66.1
Gohir.D12G163500 Gossypium hirsutum HOM05D005225 ORTHO05D006830 9.6e-180 634.0 506 63.8
HPP92_017786 Vanilla planifolia HOM05D005225 ORTHO05D006830 6.2e-179 631.3 478 64.0
TAR629G1144 Trochodendron aralioides HOM05D005225 ORTHO05D006830 2.4e-178 629.4 506 64.2
Os07g0618500 Oryza sativa ssp. japonica HOM05D005225 ORTHO05D006830 1.5e-177 626.7 473 64.1
Zm00001eb319990 Zea mays HOM05D005225 ORTHO05D006830 1.6e-174 616.7 478 63.0
SEGI_35565 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 6.0e-174 614.8 487 62.0
CSS0031076 Camellia sinensis var. sinensis HOM05D005225 ORTHO05D006830 3.0e-173 612.5 475 65.9
AL2G28280 Arabidopsis lyrata HOM05D005225 ORTHO05D006830 3.9e-173 612.1 452 64.6
SGA_v2.0_scaffold85G26791 Striga asiatica HOM05D005225 ORTHO05D006830 4.3e-172 608.6 469 64.6
FAN17G1346 Fragaria x ananassa HOM05D005225 ORTHO05D006830 5.3e-170 601.7 403 72.2
Aa31sc367G20 Aethionema arabicum HOM05D005225 ORTHO05D006830 5.8e-169 598.2 465 63.4
Solyc05g012090.4 Solanum lycopersicum HOM05D005225 ORTHO05D006830 1.3e-168 597.0 420 69.5
SHI01330 Sapria himalayana HOM05D005225 ORTHO05D006830 4.2e-167 592.0 500 61.4
Actinidia00572 Actinidia chinensis HOM05D005225 ORTHO05D006830 4.3e-164 582.0 489 62.2
FAN07G1983 Fragaria x ananassa HOM05D005225 ORTHO05D006830 4.1e-162 575.5 385 72.2
MD06G1024100 Malus domestica HOM05D005225 ORTHO05D006830 1.6e-155 553.5 439 63.8
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis HOM05D005225 ORTHO05D006830 2.0e-148 530.0 474 53.6
Pp3c27_4310 Physcomitrium patens HOM05D005225 ORTHO05D006830 9.4e-143 511.1 501 52.5
Mapoly0021s0079 Marchantia polymorpha HOM05D005225 ORTHO05D006830 2.7e-142 509.6 467 53.5
SEGI_04122 Sequoiadendron giganteum HOM05D005225 ORTHO05D006830 6.1e-142 508.4 485 53.8
RcHm_v2.0_Chr2g0139541 Rosa chinensis HOM05D005225 ORTHO05D006830 6.7e-133 478.4 312 73.4
Glyma.01G062200 Glycine max HOM05D005225 ORTHO05D006830 9.7e-132 474.6 343 68.5
Nn2g15478 Nelumbo nucifera HOM05D005225 ORTHO05D006830 9.7e-132 474.6 323 70.6
AUR62007898 Chenopodium quinoa HOM05D005225 ORTHO05D006830 3.7e-131 472.6 340 67.1
SMO358G0268 Selaginella moellendorffii HOM05D005225 ORTHO05D006830 1.1e-130 471.1 471 50.5
HanXRQChr04g0120931 Helianthus annuus HOM05D005225 ORTHO05D006830 4.8e-123 445.7 250 90.8
Phvul.007G262101 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 6.5e-120 435.3 290 73.1
Phvul.001G131450 Phaseolus vulgaris HOM05D005225 ORTHO05D006830 2.1e-118 430.3 290 71.7
CBR_g61480 Chara braunii HOM05D005225 ORTHO05D006830 1.9e-111 407.1 467 46.7
SGA_v2.0_scaffold45G17115 Striga asiatica HOM05D001733 ORTHO05D001882 5.6e-111 405.6 381 55.9
CDE04G0587 Ceratophyllum demersum HOM05D005225 ORTHO05D006830 5.2e-109 399.1 305 66.2
MCO11G893 Micromonas commoda HOM05D005225 ORTHO05D006830 2.7e-97 360.1 539 41.0
Cre10.g428550 Chlamydomonas reinhardtii HOM05D005225 ORTHO05D006830 2.6e-92 343.6 604 37.1
PRCOL_00003253 Prasinoderma coloniale HOM05D005225 ORTHO05D006830 1.1e-82 311.6 461 41.2
Cfa024768 Carpinus fangiana HOM05D005225 ORTHO05D124687 8.1e-78 295.4 467 40.3
Nn4g23480 Nelumbo nucifera HOM05D005225 ORTHO05D006830 3.9e-64 250.0 157 77.7
SGA_v2.0_scaffold16G07808 Striga asiatica HOM05D005225 ORTHO05D006830 2.9e-51 207.2 242 48.3
LjContig00272g0016968 Lotus japonicus HOM05D005225 ORTHO05D006830 1.6e-46 191.4 215 48.8
Actinidia16153 Actinidia chinensis HOM05D005225 ORTHO05D006830 1.0e-40 172.2 308 38.0
HanXRQChr04g0120941 Helianthus annuus HOM05D005225 ORTHO05D048239 2.0e-39 167.9 87 93.1
RcHm_v2.0_Chr2g0139531 Rosa chinensis HOM05D005225 ORTHO05D006830 4.1e-37 160.2 176 53.4
Nn4g23481 Nelumbo nucifera HOM05D005225 ORTHO05D006830 2.2e-35 154.5 108 70.4
SGA_v2.0_scaffold16G07809 Striga asiatica HOM05D005225 ORTHO05D048239 2.2e-35 154.5 117 64.1
HanXRQChr15g0477151 Helianthus annuus HOM05D005225 ORTHO05D044060 7.2e-34 149.4 99 77.8
TAR371G0727 Trochodendron aralioides HOM05D005225 ORTHO05D006830 8.2e-30 136.0 237 37.6
AUR62007899 Chenopodium quinoa HOM05D005225 ORTHO05D044060 7.0e-21 106.3 81 65.4
QL06p011620 Quercus lobata HOM05D005225 ORTHO05D006830 1.8e-16 91.7 68 67.6
CARHR062340 Cardamine hirsuta HOM05D005225 ORTHO05D006830 5.2e-16 90.1 68 61.8
Medtr0076s0050 Medicago truncatula HOM05D005225 ORTHO05D265034 2.6e-15 87.8 92 55.4


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