Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0091351 Helianthus annuus HOM05D000162 ORTHO05D000090 2.7e-24 117.5 119 100.0
HanXRQChr03g0090861 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-22 109.8 83 97.6
HanXRQChr06g0180941 Helianthus annuus HOM05D000162 ORTHO05D000090 2.1e-21 107.8 119 93.3
HanXRQChr03g0090781 Helianthus annuus HOM05D000162 ORTHO05D000090 3.6e-21 107.1 119 94.1
HanXRQChr03g0091721 Helianthus annuus HOM05D000162 ORTHO05D000090 3.6e-21 107.1 83 94.0
HanXRQChr03g0091201 Helianthus annuus HOM05D000115 ORTHO05D001535 6.1e-21 106.3 83 94.0
HanXRQChr03g0091731 Helianthus annuus HOM05D000162 ORTHO05D000090 1.0e-20 105.5 81 96.3
HanXRQChr03g0091331 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-20 104.8 119 92.4
HanXRQChr03g0090971 Helianthus annuus HOM05D000162 ORTHO05D000090 2.3e-20 104.4 119 91.6
HanXRQChr03g0091251 Helianthus annuus HOM05D000162 ORTHO05D000090 2.3e-20 104.4 119 91.6
HanXRQChr03g0090881 Helianthus annuus HOM05D000162 ORTHO05D000090 3.0e-20 104.0 118 93.2
HanXRQChr03g0090891 Helianthus annuus HOM05D000162 ORTHO05D000090 6.8e-20 102.8 119 91.6
HanXRQChr06g0180961 Helianthus annuus HOM05D000162 ORTHO05D000090 6.8e-20 102.8 119 89.9
HanXRQChr03g0090921 Helianthus annuus HOM05D000162 ORTHO05D003288 8.8e-20 102.4 84 91.7
HanXRQChr03g0090941 Helianthus annuus HOM05D000162 ORTHO05D000090 8.8e-20 102.4 119 90.8
HanXRQChr03g0091281 Helianthus annuus HOM05D000162 ORTHO05D000090 8.8e-20 102.4 119 90.8
HanXRQChr03g0091191 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-19 102.1 119 91.6
HanXRQChr03g0091741 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-19 102.1 118 91.5
HanXRQChr06g0163961 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-19 102.1 84 89.3
HanXRQChr03g0090841 Helianthus annuus HOM05D000162 ORTHO05D000090 1.5e-19 101.7 83 91.6
HanXRQChr03g0090961 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-19 99.8 119 89.9
HanXRQChr04g0095081 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-19 99.8 84 86.9
HanXRQChr04g0104291 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-19 99.8 83 88.0
HanXRQChr01g0021861 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-19 99.4 118 89.0
HanXRQChr03g0090771 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-19 99.4 119 91.6
HanXRQChr03g0091321 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-19 99.4 119 89.1
HanXRQChr03g0090911 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-18 98.6 119 89.9
HanXRQChr03g0091271 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-18 97.8 119 88.2
HanXRQChr06g0180871 Helianthus annuus HOM05D000162 ORTHO05D000090 2.8e-18 97.4 119 89.9
HanXRQChr03g0091221 Helianthus annuus HOM05D000162 ORTHO05D000090 3.7e-18 97.1 119 83.2
HanXRQChr03g0091291 Helianthus annuus HOM05D000162 ORTHO05D000090 3.7e-18 97.1 119 88.2
HanXRQChr06g0180981 Helianthus annuus HOM05D000162 ORTHO05D000090 3.7e-18 97.1 119 89.1
HanXRQChr09g0252881 Helianthus annuus HOM05D000162 ORTHO05D000090 6.3e-18 96.3 83 81.9
HanXRQChr03g0091341 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-17 94.7 84 85.7
HanXRQChr03g0090951 Helianthus annuus HOM05D000162 ORTHO05D000090 7.0e-17 92.8 84 84.5
HanXRQChr03g0090981 Helianthus annuus HOM05D000162 ORTHO05D000090 9.1e-17 92.4 80 86.2
ECA240G1532 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-16 92.0 83 81.9
ECA240G4817 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-16 92.0 83 81.9
HanXRQChr03g0090791 Helianthus annuus HOM05D000162 ORTHO05D000090 1.6e-16 91.7 84 85.7
ECA233G0124 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.5e-16 90.5 81 81.5
HanXRQChr03g0090831 Helianthus annuus HOM05D000162 ORTHO05D000090 3.5e-16 90.5 84 83.3
ECA240G1042 Erigeron canadensis HOM05D000442 ORTHO05D009326 4.5e-16 90.1 80 83.8
HanXRQChr13g0420301 Helianthus annuus HOM05D000162 ORTHO05D000090 4.5e-16 90.1 80 83.8
HanXRQChr13g0418851 Helianthus annuus HOM05D000162 ORTHO05D000090 7.7e-16 89.4 82 79.3
HanXRQChr13g0420861 Helianthus annuus HOM05D000162 ORTHO05D000090 7.7e-16 89.4 81 80.2
ECA233G0157 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.0e-15 89.0 81 74.1
ECA233G1023 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.0e-15 89.0 81 77.8
HanXRQChr13g0420351 Helianthus annuus HOM05D000162 ORTHO05D000090 1.0e-15 89.0 82 75.6
HanXRQChr03g0083291 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-15 88.2 80 82.5
HanXRQChr13g0420241 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-15 88.2 79 83.5
Lsat_1_v5_gn_3_111640 Lactuca sativa HOM05D000162 ORTHO05D000090 1.7e-15 88.2 118 78.0
HanXRQChr13g0410861 Helianthus annuus HOM05D000162 ORTHO05D000090 3.8e-15 87.0 73 94.5
HanXRQChr13g0418841 Helianthus annuus HOM05D000162 ORTHO05D000090 5.0e-15 86.7 81 77.8
HanXRQChr13g0420881 Helianthus annuus HOM05D000162 ORTHO05D000090 5.0e-15 86.7 80 78.8
ECA233G5832 Erigeron canadensis HOM05D000162 ORTHO05D000090 8.6e-15 85.9 81 76.5
HanXRQChr13g0420281 Helianthus annuus HOM05D000162 ORTHO05D000090 1.5e-14 85.1 80 81.2
Lsat_1_v5_gn_3_109840 Lactuca sativa HOM05D000162 ORTHO05D000090 2.5e-14 84.3 83 74.7
HanXRQChr03g0090871 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-14 84.0 44 95.5
HanXRQChr13g0420121 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-14 84.0 81 76.5
Lsat_1_v5_gn_3_111320 Lactuca sativa HOM05D000162 ORTHO05D000090 3.3e-14 84.0 83 69.9
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.2e-14 82.8 83 50.6
HanXRQChr03g0091181 Helianthus annuus HOM05D000162 ORTHO05D003288 7.2e-14 82.8 44 93.2
HanXRQChr03g0091301 Helianthus annuus HOM05D000162 ORTHO05D003288 7.2e-14 82.8 44 93.2
ECA240G0960 Erigeron canadensis HOM05D000162 ORTHO05D000090 9.5e-14 82.4 80 73.8
HanXRQChr13g0420371 Helianthus annuus HOM05D000162 ORTHO05D000090 9.5e-14 82.4 82 75.6
HanXRQChr15g0491431 Helianthus annuus HOM05D000162 ORTHO05D000090 9.5e-14 82.4 80 77.5
ECA233G1617 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-13 82.0 79 73.4
HanXRQChr03g0090811 Helianthus annuus HOM05D000162 ORTHO05D003288 2.1e-13 81.3 44 90.9
Lsat_1_v5_gn_3_111521 Lactuca sativa HOM05D000162 ORTHO05D000090 2.1e-13 81.3 80 72.5
HanXRQChr13g0410221 Helianthus annuus HOM05D000162 ORTHO05D003288 2.8e-13 80.9 45 95.6
ECA238G3298 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.6e-13 80.5 78 51.3
ECA240G4444 Erigeron canadensis HOM05D000162 ORTHO05D003288 4.7e-13 80.1 79 72.2
ECA236G5119 Erigeron canadensis HOM05D000744 ORTHO05D000332 6.1e-13 79.7 79 69.6
ECA240G4389 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.0e-12 79.0 77 76.6
Lsat_1_v5_gn_3_111261 Lactuca sativa HOM05D000162 ORTHO05D000090 1.4e-12 78.6 80 70.0
HanXRQChr06g0180911 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-12 78.2 41 92.7
HanXRQChr09g0247101 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-12 78.2 84 75.0
Lsat_1_v5_gn_3_111041 Lactuca sativa HOM05D000162 ORTHO05D000090 1.2e-11 75.5 83 74.7
HanXRQChr06g0180921 Helianthus annuus HOM05D000162 ORTHO05D003288 2.0e-11 74.7 44 84.1
HanXRQChr01g0021871 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-11 72.8 40 87.5
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 2.2e-10 71.2 82 46.3
ECA240G4244 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-09 68.9 39 82.1
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.1e-09 68.9 82 45.1
ECA240G3926 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.4e-09 68.6 81 63.0
ECA240G3128 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.4e-09 67.8 79 70.9
HanXRQChr01g0021851 Helianthus annuus HOM05D000162 ORTHO05D003288 4.1e-09 67.0 36 88.9
Lsat_1_v5_gn_3_111021 Lactuca sativa HOM05D000162 ORTHO05D000090 1.2e-08 65.5 84 63.1
HanXRQChr13g0415191 Helianthus annuus HOM05D022346 ORTHO05D003288 3.5e-08 63.9 41 78.0
Lsat_1_v5_gn_3_111360 Lactuca sativa HOM05D000162 ORTHO05D000090 7.8e-08 62.8 80 70.0
HanXRQChr15g0491421 Helianthus annuus HOM05D022346 ORTHO05D003288 1.3e-07 62.0 38 76.3
Lsat_1_v5_gn_3_111340 Lactuca sativa HOM05D000162 ORTHO05D016663 1.7e-07 61.6 80 68.8
Lsat_1_v5_gn_0_17660 Lactuca sativa HOM05D000162 ORTHO05D000090 3.9e-07 60.5 82 62.2
HanXRQChr13g0420271 Helianthus annuus HOM05D016049 ORTHO05D003288 6.6e-07 59.7 38 71.1
HanXRQChr03g0083311 Helianthus annuus HOM05D000162 ORTHO05D016663 1.9e-06 58.2 41 65.9
Hma1.2p1_1276F.1_g272100 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.3e-06 57.4 78 57.7
ECA234G1654 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.3e-06 57.0 82 37.8
ECA240G3806 Erigeron canadensis HOM05D000162 ORTHO05D003288 5.6e-06 56.6 42 66.7


User provided reference genes

Program Settings