Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0090841 Helianthus annuus HOM05D000162 ORTHO05D000090 7.4e-26 122.5 119 100.0
HanXRQChr03g0090921 Helianthus annuus HOM05D000162 ORTHO05D003288 6.3e-25 119.4 119 97.5
HanXRQChr03g0091251 Helianthus annuus HOM05D000162 ORTHO05D000090 5.9e-23 112.8 119 95.0
HanXRQChr06g0180961 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-22 111.3 119 93.3
HanXRQChr03g0091351 Helianthus annuus HOM05D000162 ORTHO05D000090 1.0e-19 102.1 83 91.6
HanXRQChr03g0090861 Helianthus annuus HOM05D000162 ORTHO05D000090 1.8e-19 101.3 83 91.6
HanXRQChr03g0090891 Helianthus annuus HOM05D000162 ORTHO05D000090 2.3e-19 100.9 119 91.6
HanXRQChr03g0091721 Helianthus annuus HOM05D000162 ORTHO05D000090 2.3e-19 100.9 83 90.4
HanXRQChr06g0180941 Helianthus annuus HOM05D000162 ORTHO05D000090 3.0e-19 100.5 119 90.8
HanXRQChr03g0091191 Helianthus annuus HOM05D000162 ORTHO05D000090 4.0e-19 100.1 81 91.4
HanXRQChr04g0104291 Helianthus annuus HOM05D000162 ORTHO05D000090 1.1e-18 98.6 83 88.0
HanXRQChr03g0091201 Helianthus annuus HOM05D000115 ORTHO05D001535 2.0e-18 97.8 83 88.0
HanXRQChr03g0091731 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-18 97.1 81 88.9
HanXRQChr03g0090781 Helianthus annuus HOM05D000162 ORTHO05D000090 4.4e-18 96.7 83 86.7
HanXRQChr03g0090911 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-18 96.3 83 88.0
HanXRQChr06g0163961 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-18 96.3 83 88.0
HanXRQChr03g0091271 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-18 95.9 81 87.7
HanXRQChr03g0091331 Helianthus annuus HOM05D000162 ORTHO05D000090 9.7e-18 95.5 81 88.9
HanXRQChr03g0090771 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-17 95.1 83 88.0
HanXRQChr03g0090941 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-17 95.1 83 86.7
HanXRQChr03g0091221 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-17 95.1 119 83.2
HanXRQChr03g0091281 Helianthus annuus HOM05D000162 ORTHO05D000090 1.3e-17 95.1 83 86.7
HanXRQChr04g0095081 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-17 94.7 83 85.5
HanXRQChr06g0180981 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-17 94.7 83 86.7
HanXRQChr03g0090881 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-17 94.4 82 87.8
HanXRQChr03g0090971 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-17 94.4 78 89.7
HanXRQChr03g0091321 Helianthus annuus HOM05D000162 ORTHO05D000090 3.7e-17 93.6 83 84.3
HanXRQChr01g0021861 Helianthus annuus HOM05D000162 ORTHO05D000090 4.8e-17 93.2 82 82.9
HanXRQChr06g0180871 Helianthus annuus HOM05D000162 ORTHO05D000090 4.8e-17 93.2 83 85.5
HanXRQChr03g0090961 Helianthus annuus HOM05D000162 ORTHO05D000090 8.2e-17 92.4 83 85.5
HanXRQChr03g0091341 Helianthus annuus HOM05D000162 ORTHO05D000090 8.2e-17 92.4 83 86.7
HanXRQChr03g0091741 Helianthus annuus HOM05D000162 ORTHO05D000090 8.2e-17 92.4 82 85.4
HanXRQChr03g0090951 Helianthus annuus HOM05D000162 ORTHO05D000090 3.1e-16 90.5 83 85.5
HanXRQChr09g0252881 Helianthus annuus HOM05D000162 ORTHO05D000090 3.1e-16 90.5 82 80.5
HanXRQChr03g0090981 Helianthus annuus HOM05D000162 ORTHO05D000090 4.1e-16 90.1 78 88.5
HanXRQChr03g0091291 Helianthus annuus HOM05D000162 ORTHO05D000090 5.3e-16 89.7 119 86.6
HanXRQChr13g0420301 Helianthus annuus HOM05D000162 ORTHO05D000090 7.0e-16 89.4 80 85.0
ECA233G0124 Erigeron canadensis HOM05D000162 ORTHO05D000090 9.1e-16 89.0 81 82.7
ECA240G1042 Erigeron canadensis HOM05D000442 ORTHO05D009326 1.6e-15 88.2 78 85.9
ECA240G1532 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.0e-15 87.8 83 79.5
ECA240G4817 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.0e-15 87.8 83 79.5
HanXRQChr03g0090831 Helianthus annuus HOM05D000162 ORTHO05D000090 2.0e-15 87.8 83 83.1
ECA233G0157 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.7e-15 87.4 81 75.3
ECA233G1023 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.7e-15 87.4 81 79.0
HanXRQChr03g0083291 Helianthus annuus HOM05D000162 ORTHO05D000090 4.5e-15 86.7 80 83.8
HanXRQChr03g0090791 Helianthus annuus HOM05D000162 ORTHO05D000090 4.5e-15 86.7 83 81.9
HanXRQChr13g0420241 Helianthus annuus HOM05D000162 ORTHO05D000090 4.5e-15 86.7 79 84.8
HanXRQChr13g0420861 Helianthus annuus HOM05D000162 ORTHO05D000090 5.9e-15 86.3 81 80.2
HanXRQChr13g0418851 Helianthus annuus HOM05D000162 ORTHO05D000090 7.7e-15 85.9 82 79.3
HanXRQChr13g0420881 Helianthus annuus HOM05D000162 ORTHO05D000090 7.7e-15 85.9 80 80.0
HanXRQChr13g0420351 Helianthus annuus HOM05D000162 ORTHO05D000090 1.0e-14 85.5 82 75.6
Lsat_1_v5_gn_3_109840 Lactuca sativa HOM05D000162 ORTHO05D000090 1.3e-14 85.1 83 75.9
ECA233G5832 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.2e-14 84.3 81 77.8
HanXRQChr13g0410861 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-14 84.3 73 90.4
HanXRQChr15g0491431 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-14 84.3 80 78.8
HanXRQChr13g0420281 Helianthus annuus HOM05D000162 ORTHO05D000090 3.8e-14 83.6 80 82.5
ECA240G3448 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.5e-14 82.8 83 53.0
HanXRQChr13g0420371 Helianthus annuus HOM05D000162 ORTHO05D000090 6.5e-14 82.8 82 78.0
Lsat_1_v5_gn_3_111640 Lactuca sativa HOM05D000162 ORTHO05D000090 6.5e-14 82.8 82 72.0
ECA238G3298 Erigeron canadensis HOM05D000162 ORTHO05D000090 8.5e-14 82.4 78 53.8
HanXRQChr13g0418841 Helianthus annuus HOM05D000162 ORTHO05D000090 8.5e-14 82.4 80 78.8
Lsat_1_v5_gn_3_111320 Lactuca sativa HOM05D000162 ORTHO05D000090 8.5e-14 82.4 82 70.7
Lsat_1_v5_gn_3_111521 Lactuca sativa HOM05D000162 ORTHO05D000090 8.5e-14 82.4 80 75.0
ECA240G4444 Erigeron canadensis HOM05D000162 ORTHO05D003288 1.5e-13 81.6 78 75.6
ECA240G0960 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.9e-13 81.3 78 76.9
ECA233G1617 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.5e-13 80.9 81 74.1
ECA236G5119 Erigeron canadensis HOM05D000744 ORTHO05D000332 3.2e-13 80.5 78 71.8
HanXRQChr13g0420121 Helianthus annuus HOM05D000162 ORTHO05D000090 3.2e-13 80.5 80 77.5
HanXRQChr06g0180911 Helianthus annuus HOM05D000162 ORTHO05D000090 5.5e-13 79.7 42 92.9
ECA240G4389 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.2e-13 79.3 76 78.9
Lsat_1_v5_gn_3_111261 Lactuca sativa HOM05D000162 ORTHO05D000090 3.6e-12 77.0 80 71.2
HanXRQChr09g0247101 Helianthus annuus HOM05D000162 ORTHO05D000090 4.7e-12 76.6 83 75.9
HanXRQChr01g0021871 Helianthus annuus HOM05D000162 ORTHO05D000090 4.4e-10 70.1 40 85.0
ECA240G4244 Erigeron canadensis HOM05D000162 ORTHO05D000090 7.5e-10 69.3 40 82.5
HanXRQChr03g0090871 Helianthus annuus HOM05D000162 ORTHO05D000090 7.5e-10 69.3 42 81.0
Lsat_1_v5_gn_3_111041 Lactuca sativa HOM05D000162 ORTHO05D000090 2.2e-09 67.8 82 72.0
ECA240G1124 Erigeron canadensis HOM05D005398 ORTHO05D000476 3.7e-09 67.0 82 45.1
ECA240G3128 Erigeron canadensis HOM05D000162 ORTHO05D000090 4.8e-09 66.6 79 72.2
ECA240G4803 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.8e-08 64.7 82 43.9
ECA240G3926 Erigeron canadensis HOM05D000162 ORTHO05D000090 3.1e-08 63.9 81 61.7
Lsat_1_v5_gn_3_111021 Lactuca sativa HOM05D000162 ORTHO05D000090 7.0e-08 62.8 42 69.0
Hma1.2p1_1276F.1_g272100 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.5e-07 60.1 78 60.3
Lsat_1_v5_gn_0_17660 Lactuca sativa HOM05D000162 ORTHO05D000090 4.5e-07 60.1 41 70.7
Lsat_1_v5_gn_3_111360 Lactuca sativa HOM05D000162 ORTHO05D000090 5.9e-07 59.7 80 68.8
Lsat_1_v5_gn_3_111340 Lactuca sativa HOM05D000162 ORTHO05D016663 1.0e-06 58.9 39 69.2
ECA234G1654 Erigeron canadensis HOM05D000162 ORTHO05D000090 2.9e-06 57.4 76 39.5
ECA240G0604 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.5e-06 56.2 83 38.6


User provided reference genes

Program Settings