Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 3.8e-193 677.9 329 100.0
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 1.1e-91 340.9 329 60.5
ECA240G3738 Erigeron canadensis HOM05D004351 ORTHO05D005196 2.0e-69 266.9 274 59.1
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 4.7e-34 149.4 324 36.7
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 3.6e-26 123.2 355 31.8
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 5.4e-22 109.4 196 36.7
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 1.4e-17 94.7 185 38.4
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 2.6e-16 90.5 235 33.2
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 5.8e-16 89.4 307 30.9
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 1.4e-14 84.7 199 36.7
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 1.9e-14 84.3 216 32.9
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 3.2e-14 83.6 215 32.6
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 7.0e-14 82.4 162 37.7
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 1.2e-13 81.6 161 39.8
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 1.2e-13 81.6 342 27.2
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 1.2e-13 81.6 358 29.9
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 4.6e-13 79.7 172 39.0
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 6.0e-13 79.3 155 38.1
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 6.0e-13 79.3 156 39.7
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 6.0e-13 79.3 186 38.2
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 1.0e-12 78.6 192 33.9
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.0e-12 78.6 172 38.4
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 1.7e-12 77.8 109 44.0
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 2.3e-12 77.4 368 26.9
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 3.0e-12 77.0 351 28.5
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 5.1e-12 76.3 188 34.6
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 1.1e-11 75.1 324 25.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 3.3e-11 73.6 174 35.1
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 9.5e-11 72.0 297 30.0
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 1.2e-10 71.6 349 27.2
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 1.6e-10 71.2 354 28.5
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 2.8e-10 70.5 138 39.9
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 4.7e-10 69.7 258 30.6
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 4.7e-10 69.7 370 26.5
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 8.1e-10 68.9 213 33.8
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 8.1e-10 68.9 204 33.8
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 8.1e-10 68.9 159 37.7
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 1.8e-09 67.8 307 27.4
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 1.8e-09 67.8 185 31.4
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 2.3e-09 67.4 192 34.4
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 2.3e-09 67.4 184 33.7
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 3.1e-09 67.0 211 31.8
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 3.1e-09 67.0 384 26.0
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 3.1e-09 67.0 191 31.9
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 4.0e-09 66.6 213 31.5
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 4.0e-09 66.6 213 33.3
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 4.0e-09 66.6 337 27.6
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 6.8e-09 65.9 314 28.3
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 6.8e-09 65.9 301 28.6
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 8.9e-09 65.5 136 39.0
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.2e-08 65.1 192 33.3
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 1.2e-08 65.1 129 38.0
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 1.5e-08 64.7 193 33.2
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 2.6e-08 63.9 165 35.2
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 2.6e-08 63.9 325 26.5
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 2.6e-08 63.9 193 35.8
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 2.6e-08 63.9 178 34.8
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 3.4e-08 63.5 187 31.6
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 4.4e-08 63.2 249 28.1
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 5.8e-08 62.8 131 35.9
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 7.5e-08 62.4 180 31.1
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 9.9e-08 62.0 390 24.1
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 9.9e-08 62.0 347 25.6
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 2.2e-07 60.8 169 31.4
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 2.2e-07 60.8 150 34.7
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 2.2e-07 60.8 83 44.6
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 2.2e-07 60.8 87 47.1
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 2.9e-07 60.5 163 33.7
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 6.4e-07 59.3 362 25.7
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 6.4e-07 59.3 229 28.4
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 2.4e-06 57.4 205 28.3
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 2.4e-06 57.4 190 33.7
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 9.2e-06 55.5 220 31.8


User provided reference genes

Program Settings