Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 3.9e-57 224.6 111 100.0
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 7.3e-48 193.7 111 85.6
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 4.4e-45 184.5 111 80.2
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.9e-43 179.1 111 75.7
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 2.1e-42 175.6 107 76.6
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 2.1e-42 175.6 108 77.8
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 2.1e-42 175.6 108 77.8
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.3e-41 172.9 106 73.6
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.7e-41 172.6 111 73.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 3.0e-41 171.8 112 72.3
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 3.9e-41 171.4 112 74.1
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 6.6e-41 170.6 109 74.3
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 8.7e-41 170.2 111 72.1
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 8.7e-41 170.2 113 72.6
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.1e-40 169.9 101 79.2
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.1e-40 169.9 109 73.4
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.5e-40 169.5 108 70.4
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.9e-40 169.1 110 71.8
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 2.5e-40 168.7 112 72.3
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 5.6e-40 167.5 109 68.8
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 3.6e-39 164.9 105 72.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.6e-39 164.9 113 69.9
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 4.8e-39 164.5 110 70.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 8.1e-39 163.7 113 69.0
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.1e-38 163.3 111 70.3
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 1.1e-38 163.3 101 72.3
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.4e-38 162.9 101 73.3
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.8e-38 162.5 104 69.2
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.4e-38 162.2 106 67.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.4e-38 162.2 101 72.3
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.1e-38 161.8 113 68.1
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.1e-38 161.8 113 70.8
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.0e-38 161.4 113 71.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 6.9e-38 160.6 100 73.0
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 9.0e-38 160.2 101 70.3
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 1.2e-37 159.8 108 67.6
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 2.0e-37 159.1 110 66.4
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 3.4e-37 158.3 110 70.0
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.8e-37 157.5 104 65.4
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 5.8e-37 157.5 111 67.6
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.8e-37 157.5 111 67.6
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 7.6e-37 157.1 112 72.3
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 7.6e-37 157.1 110 63.6
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 7.6e-37 157.1 105 66.7
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 9.9e-37 156.8 103 71.8
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 9.9e-37 156.8 107 71.0
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.3e-36 156.4 110 66.4
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 1.3e-36 156.4 113 68.1
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.3e-36 156.4 107 68.2
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.3e-36 156.4 102 71.6
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 1.7e-36 156.0 117 63.2
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.2e-36 155.6 110 65.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.2e-36 155.6 110 66.4
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.8e-36 154.8 113 68.1
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.8e-36 154.8 113 68.1
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.9e-36 154.5 113 67.3
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.9e-36 154.5 113 67.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 6.4e-36 154.1 100 71.0
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 6.4e-36 154.1 110 62.7
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 8.4e-36 153.7 113 64.6
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 8.4e-36 153.7 113 67.3
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.4e-35 152.9 110 64.5
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.9e-35 152.5 113 64.6
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 2.4e-35 152.1 113 66.4
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 2.4e-35 152.1 110 65.5
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.4e-35 152.1 118 64.4
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 2.4e-35 152.1 103 68.9
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 4.2e-35 151.4 97 73.2
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 7.1e-35 150.6 113 65.5
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 7.1e-35 150.6 115 66.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 9.3e-35 150.2 100 70.0
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 9.3e-35 150.2 100 70.0
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 9.3e-35 150.2 100 70.0
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 9.3e-35 150.2 111 64.9
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.2e-34 149.8 103 69.9
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.7e-34 148.7 99 68.7
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 3.5e-34 148.3 108 64.8
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.5e-34 148.3 109 64.2
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 4.6e-34 147.9 113 62.8
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 6.0e-34 147.5 110 66.4
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 7.9e-34 147.1 108 64.8
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 1.0e-33 146.7 99 69.7
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.3e-33 145.6 148 53.4
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 6.7e-33 144.1 107 62.6
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.5e-32 142.9 107 62.6
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.9e-32 142.5 114 61.4
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 2.5e-32 142.1 91 69.2
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 2.5e-32 142.1 104 64.4
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 3.3e-32 141.7 107 61.7
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 5.6e-32 141.0 104 63.5
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 9.6e-32 140.2 105 63.8
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 9.6e-32 140.2 115 60.9
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 9.6e-32 140.2 107 61.7
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 9.6e-32 140.2 107 61.7
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 2.8e-31 138.7 107 65.4
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 3.7e-31 138.3 107 61.7
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 4.8e-31 137.9 73 91.8
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 1.8e-30 136.0 74 89.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 5.8e-29 131.0 80 73.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 2.9e-28 128.6 87 72.4
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.1e-27 126.7 81 72.8
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.9e-27 125.9 75 78.7
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 4.2e-27 124.8 102 54.9
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 7.4e-24 114.0 68 76.5
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 3.7e-23 111.7 89 64.0
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 8.2e-23 110.5 79 70.9
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.8e-22 109.4 68 67.6
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.5e-21 106.3 110 50.0
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 5.8e-21 104.4 85 61.2
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 1.7e-20 102.8 96 52.1
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 5.5e-19 97.8 95 48.4
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 3.0e-17 92.0 125 40.0
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 1.6e-15 86.3 61 72.1
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 4.8e-15 84.7 101 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.1e-14 83.6 98 41.8
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.4e-14 83.2 58 65.5
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 6.9e-14 80.9 62 54.8
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.9e-11 72.8 152 28.9


User provided reference genes

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