Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 2.5e-59 231.9 114 100.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 8.9e-49 196.8 117 85.5
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 8.6e-44 180.3 113 78.8
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.1e-42 173.7 117 72.6
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.8e-41 172.6 118 75.4
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 2.3e-41 172.2 117 75.2
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 3.1e-41 171.8 109 76.1
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.2e-41 171.0 116 73.3
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 1.2e-40 169.9 117 74.4
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 2.0e-40 169.1 117 70.9
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.6e-40 168.7 117 70.9
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.2e-39 165.6 114 70.2
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 3.7e-39 164.9 114 70.2
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 6.4e-39 164.1 106 78.3
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 8.3e-39 163.7 118 67.8
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.4e-38 162.9 118 71.2
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 1.4e-38 162.9 106 72.6
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.4e-38 162.2 126 65.1
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.4e-38 162.2 106 77.4
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.4e-38 162.2 106 76.4
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 3.2e-38 161.8 106 77.4
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 4.1e-38 161.4 106 76.4
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 4.1e-38 161.4 106 71.7
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 4.1e-38 161.4 106 77.4
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 5.4e-38 161.0 106 77.4
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.4e-38 161.0 107 74.8
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 5.4e-38 161.0 93 80.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 5.4e-38 161.0 106 73.6
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 7.1e-38 160.6 111 73.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 7.1e-38 160.6 106 75.5
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 9.2e-38 160.2 112 73.2
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 9.2e-38 160.2 111 72.1
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 9.2e-38 160.2 112 73.2
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 9.2e-38 160.2 106 78.3
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 1.2e-37 159.8 114 70.2
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.2e-37 159.8 106 77.4
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.2e-37 159.8 113 72.6
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.6e-37 159.5 106 74.5
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 1.6e-37 159.5 106 77.4
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 2.1e-37 159.1 108 75.0
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.1e-37 159.1 132 63.6
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 2.1e-37 159.1 104 78.8
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 2.1e-37 159.1 106 76.4
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 3.5e-37 158.3 112 72.3
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 4.6e-37 157.9 104 77.9
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 4.6e-37 157.9 106 74.5
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 6.0e-37 157.5 105 74.3
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 6.0e-37 157.5 106 73.6
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 6.0e-37 157.5 126 65.9
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 7.8e-37 157.1 112 71.4
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 7.8e-37 157.1 107 74.8
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.0e-36 156.8 113 70.8
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.0e-36 156.8 104 77.9
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.3e-36 156.4 108 73.1
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.3e-36 156.4 107 72.9
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.7e-36 156.0 121 70.2
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.7e-36 156.0 114 71.9
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.7e-36 156.0 111 69.4
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 2.3e-36 155.6 104 76.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.3e-36 155.6 108 73.1
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 3.0e-36 155.2 106 74.5
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.9e-36 154.8 108 74.1
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 5.1e-36 154.5 104 76.9
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 5.1e-36 154.5 104 76.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 6.6e-36 154.1 107 75.7
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.1e-35 153.3 106 72.6
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 1.1e-35 153.3 95 81.1
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 1.1e-35 153.3 108 71.3
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.1e-35 153.3 106 73.6
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.1e-35 153.3 108 72.2
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 1.5e-35 152.9 74 90.5
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 1.5e-35 152.9 113 70.8
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 1.5e-35 152.9 113 70.8
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.5e-35 152.9 111 73.0
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.5e-35 152.9 106 73.6
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.5e-35 152.9 107 74.8
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.9e-35 152.5 113 70.8
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 2.5e-35 152.1 73 91.8
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 2.5e-35 152.1 105 73.3
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 3.3e-35 151.8 112 69.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 3.3e-35 151.8 106 69.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 4.3e-35 151.4 104 75.0
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 5.6e-35 151.0 113 69.9
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.2e-34 149.8 106 72.6
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.6e-34 149.4 108 70.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.1e-34 149.1 102 74.5
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 2.1e-34 149.1 105 72.4
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 2.8e-34 148.7 105 67.6
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 2.8e-34 148.7 105 66.7
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.6e-34 148.3 101 73.3
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 4.7e-34 147.9 107 70.1
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 4.7e-34 147.9 110 70.0
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.4e-33 146.4 114 69.3
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.3e-31 139.8 66 93.9
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.7e-31 139.4 105 66.7
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.1e-30 136.7 66 90.9
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.9e-30 136.0 105 66.7
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 5.4e-30 134.4 172 48.8
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 9.2e-30 133.7 105 65.7
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.2e-29 133.3 104 68.3
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 2.7e-29 132.1 122 60.7
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.6e-29 131.3 65 93.8
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.3e-28 129.8 64 89.1
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.1e-27 126.7 115 59.1
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 9.6e-27 123.6 101 63.4
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 6.2e-26 120.9 73 78.1
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 1.4e-25 119.8 71 71.8
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.4e-25 119.0 71 71.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 2.4e-25 119.0 62 87.1
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 2.6e-24 115.5 75 65.3
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.4e-24 115.2 65 84.6
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.7e-23 112.8 117 56.4
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.1e-17 93.6 114 48.2
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 9.3e-14 80.5 85 51.8
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 9.3e-14 80.5 70 61.4
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.2e-13 80.1 71 67.6
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.5e-13 78.6 67 70.1
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.8e-12 76.3 77 59.7
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.4e-09 66.6 35 77.1


User provided reference genes

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