Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 7.9e-117 423.7 201 100.0
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 9.6e-115 416.8 200 99.5
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 9.6e-115 416.8 200 99.5
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 9.6e-115 416.8 200 99.5
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 9.6e-115 416.8 200 99.5
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 9.6e-115 416.8 200 99.5
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 9.6e-115 416.8 200 99.5
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.0e-104 382.5 180 100.0
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.7e-69 265.8 168 78.6
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.2e-58 229.6 213 53.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.5e-54 216.9 218 51.8
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.5e-54 216.9 218 51.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.5e-54 216.9 218 51.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 4.3e-54 215.3 166 60.8
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 7.5e-51 204.5 207 49.8
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 2.2e-50 203.0 214 48.1
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.4e-49 198.4 208 49.5
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 7.0e-49 198.0 217 45.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.0e-49 198.0 223 47.5
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.0e-47 194.1 217 45.2
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 8.6e-47 191.0 202 49.5
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 2.8e-45 186.0 139 59.0
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 1.4e-44 183.7 176 51.1
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 5.8e-43 178.3 159 50.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 5.8e-43 178.3 159 50.9
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 5.8e-43 178.3 162 51.2
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 5.8e-43 178.3 159 50.9
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 1.3e-39 167.2 120 61.7
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 6.6e-39 164.9 153 50.3
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 3.5e-32 142.5 123 53.7
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 1.0e-31 141.0 100 64.0
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.0e-31 141.0 162 42.6
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.7e-31 140.2 160 45.0
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 2.3e-31 139.8 100 62.0
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 6.6e-31 138.3 112 56.2
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 2.5e-30 136.3 113 55.8
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 5.6e-30 135.2 147 43.5
Lju5009P0T46 Lonicera japonica HOM05D001070 ORTHO05D010233 7.3e-30 134.8 163 45.4
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 7.3e-30 134.8 133 50.4
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.6e-29 132.5 147 42.9
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 3.6e-29 132.5 147 42.9
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.6e-29 132.5 147 42.9
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 3.6e-29 132.5 147 42.9
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.6e-29 132.5 147 42.9
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.6e-29 132.5 147 42.9
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.6e-29 132.5 147 42.9
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 8.1e-29 131.3 102 60.8
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 8.9e-28 127.9 94 58.5
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 1.5e-27 127.1 147 42.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 2.0e-27 126.7 145 46.9
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 4.9e-26 122.1 108 52.8
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.8e-21 106.3 149 43.0
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.7e-21 105.5 69 63.8
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 1.8e-20 103.6 79 64.6
HPP92_028417 Vanilla planifolia HOM05D001070 ORTHO05D010233 4.9e-18 95.5 121 44.6
CsaV3_1G025490 Cucumis sativus L. HOM05D001070 ORTHO05D013014 1.1e-17 94.4 72 51.4
SEGI_28780 Sequoiadendron giganteum HOM05D000806 ORTHO05D002324 2.4e-17 93.2 99 44.4
Nn6g34149 Nelumbo nucifera HOM05D001070 ORTHO05D010233 5.4e-17 92.0 128 39.1
SGA_v2.0_scaffold893G53699 Striga asiatica HOM05D001070 ORTHO05D010233 1.6e-16 90.5 107 42.1
Migut.G00823 Erythranthe guttata HOM05D001070 ORTHO05D010233 3.9e-15 85.9 71 56.3
Gohir.D11G334350 Gossypium hirsutum HOM05D001070 ORTHO05D010233 3.9e-15 85.9 71 54.9
Glyma.13G038800 Glycine max HOM05D001070 ORTHO05D010233 3.3e-14 82.8 85 47.1
Migut.G01153 Erythranthe guttata HOM05D001070 ORTHO05D010233 4.3e-14 82.4 71 54.9
Nn029s41578 Nelumbo nucifera HOM05D001070 ORTHO05D010233 9.0e-12 74.7 63 54.0
GSVIVG01009552001 Vitis vinifera HOM05D001070 ORTHO05D010233 1.2e-11 74.3 119 39.5
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 2.2e-10 70.1 58 56.9
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.4e-10 68.6 46 65.2
Psat5g037720 Pisum sativum HOM05D001070 ORTHO05D010233 1.4e-09 67.4 60 45.0
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.4e-09 66.6 28 100.0


User provided reference genes

Program Settings