Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 2.0e-41 172.2 99 100.0
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 8.6e-40 166.8 99 86.9
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 4.2e-39 164.5 99 86.9
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 1.8e-37 159.1 99 83.8
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 2.3e-37 158.7 99 83.8
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.5e-36 156.0 99 82.8
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.5e-36 156.0 99 82.8
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.5e-36 156.0 99 82.8
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 1.5e-36 156.0 99 82.8
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.5e-36 156.0 99 82.8
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 7.5e-36 153.7 99 81.8
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.5e-36 153.7 99 81.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 9.8e-36 153.3 99 80.8
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.3e-35 152.9 99 80.8
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 5.4e-34 147.5 99 77.8
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 5.4e-34 147.5 99 77.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 5.4e-34 147.5 99 77.8
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 5.4e-34 147.5 99 77.8
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 5.4e-34 147.5 99 79.8
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 9.2e-34 146.7 99 79.8
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 2.7e-33 145.2 99 76.8
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 3.5e-33 144.8 99 77.8
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 7.8e-33 143.7 99 76.8
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.3e-32 142.9 99 75.8
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.7e-32 142.5 99 75.8
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 2.3e-32 142.1 99 76.8
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.5e-31 139.4 96 77.1
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.5e-31 139.4 99 76.8
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 7.3e-31 137.1 99 77.8
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.0e-29 133.3 97 73.2
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.3e-29 132.1 91 75.8
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 4.0e-29 131.3 96 72.9
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 5.2e-29 131.0 99 72.7
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 8.9e-29 130.2 87 78.2
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 1.2e-28 129.8 99 74.7
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.2e-26 121.7 87 72.4
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 6.6e-24 114.0 99 65.7
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.5e-23 112.1 87 71.3
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 5.2e-21 104.4 80 67.5
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 8.3e-19 97.1 52 92.3
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 3.2e-18 95.1 69 73.9
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.2e-18 95.1 52 88.5
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.0e-18 94.0 69 72.5
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 5.0e-16 87.8 99 53.5
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 3.3e-15 85.1 63 69.8
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.8e-14 82.0 67 70.1
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.5e-12 76.3 44 86.4
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 9.5e-07 57.0 46 69.6


User provided reference genes

Program Settings