Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 3.0e-285 984.6 519 100.0
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 2.4e-202 709.1 520 75.8
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 3.4e-188 662.1 520 73.1
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 8.7e-168 594.3 518 63.7
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.1e-167 594.0 533 62.9
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.5e-167 593.6 521 64.3
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 1.5e-167 593.6 521 64.3
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.6e-166 590.1 518 64.9
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 4.0e-165 585.5 522 63.4
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.0e-165 584.3 525 63.2
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 2.9e-163 579.3 520 61.3
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.2e-161 573.9 521 62.6
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.6e-161 573.5 524 61.3
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 3.5e-161 572.4 521 63.0
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 4.6e-161 572.0 522 62.1
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 8.7e-160 567.8 522 61.5
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 2.1e-158 563.1 523 59.7
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 6.3e-158 561.6 525 62.1
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.1e-157 560.8 519 60.3
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.4e-157 560.5 522 62.5
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.4e-157 560.5 521 61.0
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.2e-156 557.4 523 60.2
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.5e-156 557.0 518 60.6
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.5e-156 557.0 519 60.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.0e-156 556.6 518 61.2
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.4e-156 555.8 523 60.2
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 1.3e-155 553.9 523 61.0
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 3.8e-155 552.4 522 60.7
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 8.4e-155 551.2 522 60.7
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.9e-154 550.1 516 59.9
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 7.2e-154 548.1 521 59.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.1e-153 546.6 517 60.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 4.6e-153 545.4 519 60.5
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 6.1e-153 545.0 519 60.7
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 7.9e-153 544.7 519 60.1
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 3.9e-152 542.3 519 59.2
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 5.1e-152 542.0 526 57.8
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 1.1e-151 540.8 526 59.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.2e-150 536.6 514 60.9
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 2.2e-150 536.6 519 59.3
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 2.2e-150 536.6 523 59.5
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 1.8e-149 533.5 523 59.8
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 6.9e-149 531.6 520 57.9
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.2e-148 530.8 520 59.2
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.0e-148 530.0 532 58.3
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 8.5e-147 524.6 519 58.6
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 1.1e-146 524.2 527 56.2
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 4.2e-146 522.3 525 57.5
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 5.5e-146 521.9 519 57.2
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 2.1e-145 520.0 524 56.9
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.6e-145 519.2 522 57.5
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 6.1e-145 518.5 519 57.0
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 1.0e-144 517.7 519 58.6
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 1.4e-144 517.3 518 57.7
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 3.0e-144 516.2 531 55.6
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 5.1e-144 515.4 529 56.9
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 2.8e-142 509.6 521 56.0
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 3.1e-141 506.1 541 57.3
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 4.1e-141 505.8 519 57.8
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.2e-140 504.2 528 54.7
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 1.2e-140 504.2 518 56.2
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 2.0e-140 503.4 552 54.7
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 4.5e-140 502.3 533 55.0
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.7e-139 500.4 550 53.3
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 2.2e-139 500.0 521 55.3
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 1.1e-138 497.7 521 55.9
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 3.2e-138 496.1 522 55.6
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 4.2e-138 495.7 522 55.0
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 1.2e-137 494.2 519 55.9
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 1.8e-136 490.3 529 53.3
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 2.3e-136 490.0 531 53.3
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.4e-133 479.9 524 54.0
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.1e-133 479.2 522 53.8
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 9.1e-133 478.0 523 53.3
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.2e-132 477.6 530 51.9
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 3.5e-132 476.1 528 51.7
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 4.2e-130 469.2 530 51.5
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 5.5e-130 468.8 529 52.2
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 7.2e-130 468.4 526 53.8
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 2.1e-129 466.8 525 53.0
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 8.0e-129 464.9 526 52.9
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.1e-127 461.1 538 52.2
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 5.7e-127 458.8 526 51.7
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 1.3e-126 457.6 527 52.0
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 4.8e-126 455.7 520 52.5
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.0e-123 448.0 527 50.1
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 5.0e-123 445.7 529 50.7
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 1.1e-122 444.5 529 50.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 3.6e-121 439.5 429 56.6
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 9.8e-119 431.4 520 49.6
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.3e-115 421.0 369 64.5
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 2.9e-115 419.9 530 53.2
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.8e-112 410.6 526 48.1
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 4.4e-111 406.0 363 62.8
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 8.3e-110 401.7 366 59.6
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.6e-105 386.3 336 64.9
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.1e-101 372.9 535 43.7
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.1e-98 364.8 527 42.9
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.9e-91 339.7 522 43.5
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 3.2e-85 320.1 354 55.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 4.3e-82 309.7 601 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 9.3e-61 238.8 360 43.1
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.4e-56 224.2 211 56.9
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 3.4e-55 220.3 565 33.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.2e-38 164.5 194 53.6
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 2.8e-33 147.5 163 51.5
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 4.2e-29 133.7 327 37.3
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 4.8e-25 120.2 328 36.0
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 2.0e-23 114.8 127 47.2
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.8e-16 91.7 158 38.0
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 2.0e-07 61.6 53 56.6
Lalb_Chr07g0179541 Lupinus albus HOM05D004574 ORTHO05D005612 7.7e-07 59.7 80 43.8
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.3e-06 58.9 43 76.7
CAN.G518.8 Capsicum annuum HOM05D004574 ORTHO05D005612 2.2e-06 58.2 91 38.5
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 3.8e-06 57.4 49 57.1
CiPaw.16G117400 Carya illinoinensis HOM05D004574 ORTHO05D005612 5.0e-06 57.0 63 49.2
MD15G1158500 Malus domestica HOM05D004574 ORTHO05D005612 5.0e-06 57.0 61 47.5
Oeu040778.1 Olea europaea HOM05D004574 ORTHO05D005612 5.0e-06 57.0 66 45.5
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 8.5e-06 56.2 55 50.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 8.5e-06 56.2 56 48.2


User provided reference genes

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