Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.7e-238 828.9 420 100.0
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 4.7e-148 528.5 512 58.0
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 5.8e-138 495.0 391 67.5
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 9.7e-93 344.7 374 51.6
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 1.7e-89 334.0 387 49.6
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.9e-88 330.5 385 48.1
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 1.2e-87 327.8 385 48.1
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 1.3e-84 317.8 429 44.1
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 2.0e-82 310.5 383 46.7
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.7e-82 310.1 355 49.0
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.3e-81 307.8 372 47.6
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.9e-80 303.9 390 46.2
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 4.7e-79 299.3 342 48.2
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 5.2e-78 295.8 354 48.3
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 1.2e-77 294.7 364 48.1
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 1.3e-76 291.2 410 42.4
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 2.8e-76 290.0 414 41.3
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 4.5e-74 282.7 369 45.3
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.7e-74 282.0 375 44.8
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 3.8e-73 279.6 369 42.3
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.5e-73 278.9 369 44.4
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 1.5e-72 277.7 408 40.9
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 2.5e-72 276.9 382 42.9
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 3.6e-71 273.1 355 42.8
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 4.7e-71 272.7 350 43.1
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.5e-69 267.7 408 41.2
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.2e-68 263.8 408 41.9
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 4.9e-68 262.7 356 43.8
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 6.3e-68 262.3 433 39.7
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 3.1e-67 260.0 381 42.0
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 4.1e-67 259.6 387 40.1
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 1.7e-65 254.2 351 43.3
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 2.3e-65 253.8 390 38.5
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 2.9e-65 253.4 359 41.2
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 3.8e-65 253.1 306 47.7
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 5.0e-65 252.7 354 42.7
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 8.6e-65 251.9 353 43.1
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 8.6e-65 251.9 351 43.6
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 2.5e-64 250.4 345 41.7
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 3.3e-64 250.0 397 39.8
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 2.1e-63 247.3 381 39.9
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.7e-63 246.1 371 39.9
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.0e-62 243.0 380 39.7
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 2.6e-61 240.4 399 37.6
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 3.7e-60 236.5 376 39.4
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.9e-60 236.1 380 38.9
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 6.4e-60 235.7 471 34.2
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-59 233.8 380 38.9
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.0e-57 228.4 250 49.2
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.3e-57 228.0 362 42.3
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 3.9e-57 226.5 249 49.0
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 8.6e-57 225.3 285 47.4
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.1e-56 224.9 261 47.9
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 1.1e-54 218.4 252 48.8
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 3.1e-54 216.9 147 74.1
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 6.8e-54 215.7 401 35.7
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.5e-53 214.5 376 37.5
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 4.9e-52 209.5 452 35.6
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 2.4e-51 207.2 298 41.3
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 4.1e-51 206.5 267 46.1
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 7.0e-51 205.7 236 46.2
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 3.3e-48 196.8 263 41.8
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 5.6e-48 196.1 281 39.5
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 8.1e-47 192.2 234 42.7
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 1.4e-46 191.4 381 33.3
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.0e-46 189.9 339 36.3
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.9e-43 181.0 253 43.1
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 1.7e-41 174.5 371 34.5
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 5.6e-40 169.5 417 33.3
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.8e-38 164.5 332 32.8
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-38 164.1 198 45.5
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 4.0e-38 163.3 232 40.9
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 2.6e-37 160.6 238 39.9
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 4.4e-37 159.8 238 41.6
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.8e-37 159.5 397 32.0
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 2.4e-35 154.1 233 38.6
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 7.1e-35 152.5 253 37.9
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 2.3e-33 147.5 166 48.2
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 3.3e-32 143.7 156 48.7
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 6.2e-31 139.4 241 36.9
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.0e-29 134.4 194 40.2
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 3.4e-29 133.7 237 36.7
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.3e-28 131.7 192 38.0
HanXRQChr03g0083731 Helianthus annuus HOM05D005777 ORTHO05D006854 2.2e-28 131.0 92 76.1
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 2.9e-28 130.6 117 51.3
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 7.1e-27 125.9 159 50.3
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-26 123.2 167 43.1
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-25 121.7 175 42.9
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.3e-25 120.9 161 44.1
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.6e-25 119.4 175 42.3
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 9.6e-24 115.5 155 48.4
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 1.3e-23 115.2 238 33.6
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 1.8e-22 111.3 78 70.5
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.4e-22 110.9 82 64.6
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.9e-22 109.4 142 45.8
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 2.6e-21 107.5 147 44.2
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 2.6e-21 107.5 147 44.2
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.4e-21 107.1 68 73.5
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 3.4e-21 107.1 156 44.2
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.7e-20 104.8 155 44.5
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.7e-20 104.8 257 31.9
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-20 104.8 78 62.8
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 2.2e-20 104.4 153 42.5
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 2.9e-20 104.0 147 43.5
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 3.8e-20 103.6 155 43.2
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 6.4e-20 102.8 144 44.4
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.1e-19 102.1 155 43.9
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-19 100.9 142 42.3
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 4.2e-19 100.1 145 40.7
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-18 96.7 94 47.9
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.3e-17 95.1 223 31.8
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 2.5e-16 90.9 149 40.3
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 3.3e-16 90.5 80 55.0
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.6e-16 89.0 72 54.2
Lsat_1_v5_gn_8_138920 Lactuca sativa HOM05D005777 ORTHO05D006854 2.8e-15 87.4 122 46.7
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-14 85.5 88 48.9
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 1.6e-10 71.6 85 42.4
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.0e-09 68.9 163 30.7
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-09 68.6 73 47.9
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 9.6e-08 62.4 52 57.7
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.3e-07 62.0 84 38.1
FAN18G0036 Fragaria x ananassa HOM05D005777 ORTHO05D006854 6.9e-06 56.2 33 72.7


User provided reference genes

Program Settings