Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0083661 Helianthus annuus HOM05D002285 ORTHO05D004192 3.5e-73 278.1 133 100.0
HanXRQChr03g0084781 Helianthus annuus HOM05D002285 ORTHO05D004192 1.2e-57 226.5 132 81.8
HanXRQChr07g0198621 Helianthus annuus HOM05D002285 ORTHO05D004192 3.6e-57 224.9 132 82.6
ECA240G2921 Erigeron canadensis HOM05D002285 ORTHO05D004192 4.8e-54 214.5 132 77.3
PSO541G2777 Papaver somniferum HOM05D002285 ORTHO05D004192 9.1e-53 210.3 132 72.0
PSO675G2493 Papaver somniferum HOM05D002285 ORTHO05D004192 9.1e-53 210.3 132 72.0
Lj9P652T21 Lonicera japonica HOM05D002285 ORTHO05D004192 1.5e-52 209.5 132 73.5
QL06p001430 Quercus lobata HOM05D002285 ORTHO05D004192 2.6e-52 208.8 132 73.5
arahy.Tifrunner.gnm1.ann1.2HCW1A Arachis hypogaea HOM05D002285 ORTHO05D004192 5.9e-52 207.6 132 73.5
arahy.Tifrunner.gnm1.ann1.IXY6UZ Arachis hypogaea HOM05D002285 ORTHO05D004192 5.9e-52 207.6 132 73.5
Sopen01g040410 Solanum pennellii HOM05D002285 ORTHO05D004192 5.9e-52 207.6 132 72.0
PGSC0003DMG400003295 Solanum tuberosum HOM05D002285 ORTHO05D004192 5.9e-52 207.6 132 72.0
Thecc.10G132200 Theobroma cacao HOM05D002285 ORTHO05D004192 5.9e-52 207.6 132 72.7
VMungo0540G1611 Vigna mungo HOM05D002285 ORTHO05D004192 5.9e-52 207.6 125 76.0
Solyc01g096700.4 Solanum lycopersicum HOM05D002285 ORTHO05D004192 1.0e-51 206.8 131 72.5
Cc07_g11350 Coffea canephora HOM05D002285 ORTHO05D004192 1.3e-51 206.5 132 72.0
Glyma.12G168800 Glycine max HOM05D002285 ORTHO05D004192 1.7e-51 206.1 125 75.2
Lsat_1_v5_gn_6_76300 Lactuca sativa HOM05D002285 ORTHO05D004192 2.2e-51 205.7 132 72.7
Nitab4.5_0007610g0020 Nicotiana tabacum HOM05D002285 ORTHO05D004192 2.9e-51 205.3 125 72.8
SGA_v2.0_scaffold25G10982 Striga asiatica HOM05D002285 ORTHO05D004192 2.9e-51 205.3 130 73.8
ECA246G3634 Erigeron canadensis HOM05D002285 ORTHO05D004192 3.8e-51 204.9 132 70.5
Gorai.010G212600 Gossypium raimondii HOM05D002285 ORTHO05D004192 3.8e-51 204.9 132 71.2
vmacro09396 Vaccinium macrocarpon HOM05D002285 ORTHO05D004192 3.8e-51 204.9 132 73.5
Nn7g37168 Nelumbo nucifera HOM05D002285 ORTHO05D004192 5.0e-51 204.5 132 71.2
CAN.G134.32 Capsicum annuum HOM05D002285 ORTHO05D004192 6.5e-51 204.1 132 68.9
COL.COLO4_32862 Corchorus olitorius HOM05D002285 ORTHO05D004192 6.5e-51 204.1 132 71.2
GSVIVG01012187001 Vitis vinifera HOM05D002285 ORTHO05D004192 6.5e-51 204.1 132 71.2
Phvul.006G217200 Phaseolus vulgaris HOM05D002285 ORTHO05D004192 8.5e-51 203.8 125 75.2
Prupe.8G189400 Prunus persica HOM05D002285 ORTHO05D004192 8.5e-51 203.8 132 71.2
Aqoxy2G00069 Aquilegia oxysepala HOM05D002285 ORTHO05D004192 1.1e-50 203.4 132 69.7
Lj6g0002670 Lotus japonicus HOM05D002285 ORTHO05D004192 1.1e-50 203.4 132 70.5
Rhsim04G0038900 Rhododendron simsii HOM05D002285 ORTHO05D004192 1.4e-50 203.0 130 72.3
Nitab4.5_0004168g0010 Nicotiana tabacum HOM05D002285 ORTHO05D004192 1.9e-50 202.6 132 69.7
CSS0011301 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 3.2e-50 201.8 125 73.6
Glyma.08G188900 Glycine max HOM05D002285 ORTHO05D004192 3.2e-50 201.8 125 73.6
Sabra01G0024900 Salix brachista HOM05D002285 ORTHO05D004192 3.2e-50 201.8 125 72.8
CiPaw.05G050700 Carya illinoinensis HOM05D002285 ORTHO05D004192 4.2e-50 201.4 125 71.2
Duzib128G0133 Durio zibethinus HOM05D002285 ORTHO05D004192 4.2e-50 201.4 132 69.7
Lsat_1_v5_gn_3_22761 Lactuca sativa HOM05D002285 ORTHO05D004192 4.2e-50 201.4 132 71.2
Peaxi162Scf00220g00025 Petunia axillaris HOM05D002285 ORTHO05D004192 4.2e-50 201.4 132 69.7
Potri.001G035800 Populus trichocarpa HOM05D002285 ORTHO05D004192 4.2e-50 201.4 125 72.8
ATR1096G014 Amborella trichopoda HOM05D002285 ORTHO05D004192 5.5e-50 201.1 132 69.7
Lalb_Chr15g0090711 Lupinus albus HOM05D002285 ORTHO05D004192 5.5e-50 201.1 125 72.8
Cpa.g.sc33.153 Carica papaya HOM05D002285 ORTHO05D004192 7.2e-50 200.7 111 78.4
ClCG05G009460 Citrullus lanatus HOM05D002285 ORTHO05D004192 7.2e-50 200.7 132 70.5
Haze_01812 Corylus avellana HOM05D002285 ORTHO05D004192 7.2e-50 200.7 125 70.4
MD10G1150700 Malus domestica HOM05D002285 ORTHO05D004192 7.2e-50 200.7 132 70.5
TAR629G0600 Trochodendron aralioides HOM05D002285 ORTHO05D004192 7.2e-50 200.7 132 68.9
TWI12G1303 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 9.4e-50 200.3 132 70.5
SGA_v2.0_scaffold19G08809 Striga asiatica HOM05D002285 ORTHO05D004192 1.2e-49 199.9 130 70.0
Ah.14g085290 Amaranthus hybridus HOM05D002285 ORTHO05D004192 1.6e-49 199.5 132 69.7
CiPaw.06G144200 Carya illinoinensis HOM05D002285 ORTHO05D004192 1.6e-49 199.5 125 72.0
Gohir.A06G172500 Gossypium hirsutum HOM05D002285 ORTHO05D004192 1.6e-49 199.5 132 69.7
MD05G1158000 Malus domestica HOM05D002285 ORTHO05D004192 1.6e-49 199.5 132 70.5
Manes.15G172900 Manihot esculenta HOM05D002285 ORTHO05D004192 1.6e-49 199.5 132 68.2
CSS0018531 Camellia sinensis var. sinensis HOM05D002285 ORTHO05D004192 2.1e-49 199.1 125 72.0
Ca_15481_v3 Cicer arietinum L. HOM05D002285 ORTHO05D004192 2.1e-49 199.1 132 68.9
Gohir.D06G181100 Gossypium hirsutum HOM05D002285 ORTHO05D004192 2.1e-49 199.1 132 68.9
Gorai.010G212800 Gossypium raimondii HOM05D002285 ORTHO05D004192 2.1e-49 199.1 132 68.9
Oeu050118.1 Olea europaea HOM05D002285 ORTHO05D004192 2.1e-49 199.1 132 69.7
PSO541G2672 Papaver somniferum HOM05D002285 ORTHO05D004192 2.1e-49 199.1 132 68.2
Ah.09g228410 Amaranthus hybridus HOM05D002285 ORTHO05D004192 2.7e-49 198.7 132 70.5
DCAR_029722 Daucus carota HOM05D002285 ORTHO05D004192 2.7e-49 198.7 132 69.7
Sc09g0004710 Simmondsia chinensis HOM05D002285 ORTHO05D004192 2.7e-49 198.7 132 68.9
FvH4_2g17680 Fragaria vesca HOM05D002285 ORTHO05D004192 3.6e-49 198.4 132 69.7
FAN15G0402 Fragaria x ananassa HOM05D002285 ORTHO05D004192 3.6e-49 198.4 132 69.7
FAN24G1949 Fragaria x ananassa HOM05D002285 ORTHO05D004192 3.6e-49 198.4 132 69.7
PGR031G2891 Punica granatum HOM05D002285 ORTHO05D004192 3.6e-49 198.4 132 69.7
Zm00001eb085870 Zea mays HOM05D002285 ORTHO05D004192 3.6e-49 198.4 132 68.9
Atru.chr8.2275 Acer truncatum HOM05D002285 ORTHO05D004192 4.7e-49 198.0 132 70.5
CANSAT01G1933 Cannabis sativa HOM05D002285 ORTHO05D004192 4.7e-49 198.0 125 70.4
MELO3C019433.2 Cucumis melo HOM05D002285 ORTHO05D004192 4.7e-49 198.0 132 69.7
CsaV3_3G019250 Cucumis sativus L. HOM05D002285 ORTHO05D004192 4.7e-49 198.0 132 69.7
Migut.I00387 Erythranthe guttata HOM05D002285 ORTHO05D004192 4.7e-49 198.0 125 70.4
Gohir.A06G172300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 4.7e-49 198.0 135 68.9
HPP92_028185 Vanilla planifolia HOM05D002285 ORTHO05D004192 4.7e-49 198.0 132 68.2
Duzib114G1054 Durio zibethinus HOM05D002285 ORTHO05D004192 6.1e-49 197.6 132 68.9
Eucgr.G03185 Eucalyptus grandis HOM05D002285 ORTHO05D004192 7.9e-49 197.2 132 68.2
Lalb_Chr20g0123651 Lupinus albus HOM05D002285 ORTHO05D004192 7.9e-49 197.2 125 70.4
Zm00001eb085940 Zea mays HOM05D002285 ORTHO05D004192 7.9e-49 197.2 132 68.2
CDE08G0904 Ceratophyllum demersum HOM05D002285 ORTHO05D004192 1.0e-48 196.8 132 69.7
TWI75G0169 Tripterygium wilfordii HOM05D002285 ORTHO05D004192 1.4e-48 196.4 132 67.4
MSTRG.11320 Avicennia marina HOM05D002285 ORTHO05D004192 2.3e-48 195.7 132 68.2
TAR629G0471 Trochodendron aralioides HOM05D002285 ORTHO05D004192 2.3e-48 195.7 132 68.2
EL10Ac1g01198 Beta vulgaris HOM05D002285 ORTHO05D004192 3.0e-48 195.3 132 68.2
EL10Ac1g01199 Beta vulgaris HOM05D002285 ORTHO05D004192 3.0e-48 195.3 132 68.2
RcHm_v2.0_Chr6g0282661 Rosa chinensis HOM05D002285 ORTHO05D004192 3.9e-48 194.9 132 68.9
Actinidia01697 Actinidia chinensis HOM05D002285 ORTHO05D004192 5.1e-48 194.5 135 67.4
PSO675G1354 Papaver somniferum HOM05D002285 ORTHO05D004192 5.1e-48 194.5 132 66.7
Potri.003G190000 Populus trichocarpa HOM05D002285 ORTHO05D004192 5.1e-48 194.5 125 69.6
Sed0011384 Sechium edule HOM05D002285 ORTHO05D004192 5.1e-48 194.5 125 69.6
Sed0020539 Sechium edule HOM05D002285 ORTHO05D004192 5.1e-48 194.5 132 68.2
Dinv04986 Davidia involucrata HOM05D002285 ORTHO05D004192 6.7e-48 194.1 132 68.2
Psat0s1023g0040 Pisum sativum HOM05D002285 ORTHO05D004192 6.7e-48 194.1 132 68.2
Oeu004240.2 Olea europaea HOM05D002285 ORTHO05D004192 8.8e-48 193.7 125 68.8
SEGI_05673 Sequoiadendron giganteum HOM05D002285 ORTHO05D004192 8.8e-48 193.7 132 65.9
unitig_22.g6247 Utricularia gibba HOM05D002285 ORTHO05D004192 1.1e-47 193.4 132 66.7
AUR62018932 Chenopodium quinoa HOM05D002285 ORTHO05D004192 5.7e-47 191.0 132 66.7
AUR62027776 Chenopodium quinoa HOM05D002285 ORTHO05D004192 5.7e-47 191.0 132 66.7
HanXRQChr17g0536391 Helianthus annuus HOM05D002285 ORTHO05D004192 5.7e-47 191.0 132 65.2
Sabra03G0139800 Salix brachista HOM05D002285 ORTHO05D004192 5.7e-47 191.0 132 65.9
CARHR086000 Cardamine hirsuta HOM05D002285 ORTHO05D004192 7.4e-47 190.7 132 67.4
Ciclev10011261m.g Citrus clementina HOM05D002285 ORTHO05D004192 7.4e-47 190.7 132 65.9
Medtr7g109430 Medicago truncatula HOM05D002285 ORTHO05D004192 7.4e-47 190.7 128 68.8
AT3G11450 Arabidopsis thaliana HOM05D002285 ORTHO05D004192 1.7e-46 189.5 132 66.7
BcaB06g25623 Brassica carinata HOM05D002285 ORTHO05D004192 1.7e-46 189.5 132 66.7
Psat7g025360 Pisum sativum HOM05D002285 ORTHO05D004192 1.7e-46 189.5 132 65.9
Sp3g09680 Schrenkiella parvula HOM05D002285 ORTHO05D004192 3.7e-46 188.3 132 66.7
THA.LOC104816587 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 3.7e-46 188.3 132 67.4
Carub.0003s1077 Capsella rubella HOM05D002285 ORTHO05D004192 6.3e-46 187.6 132 65.9
Medtr3g113680 Medicago truncatula HOM05D002285 ORTHO05D004192 8.2e-46 187.2 128 67.2
A05p37890 Brassica napus HOM05D002285 ORTHO05D004192 1.1e-45 186.8 132 65.9
Thhalv10020260m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 1.1e-45 186.8 132 65.9
CDE02G4687 Ceratophyllum demersum HOM05D002285 ORTHO05D004192 1.4e-45 186.4 110 76.4
BcaB04g21135 Brassica carinata HOM05D002285 ORTHO05D004192 1.8e-45 186.0 132 65.2
BcaC05g29373 Brassica carinata HOM05D002285 ORTHO05D004192 3.1e-45 185.3 132 65.2
C05p56680 Brassica napus HOM05D002285 ORTHO05D004192 3.1e-45 185.3 132 65.2
BolC5t34333H Brassica oleracea HOM05D002285 ORTHO05D004192 3.1e-45 185.3 132 65.2
BraA05t22583Z Brassica rapa HOM05D002285 ORTHO05D004192 4.1e-45 184.9 132 65.2
AagrBONN_evm.TU.Sc2ySwM_228.101 Anthoceros agrestis HOM05D002285 ORTHO05D004192 5.3e-45 184.5 132 61.4
Thhalv10012905m.g Eutrema salsugineum HOM05D002285 ORTHO05D004192 5.3e-45 184.5 125 64.8
THA.LOC104826826 Tarenaya hassleriana HOM05D002285 ORTHO05D004192 5.3e-45 184.5 132 65.2
Hma1.2p1_0233F.1_g098050 Hydrangea macrophylla HOM05D002285 ORTHO05D004192 7.0e-45 184.1 120 70.8
Aa31LG3G4780 Aethionema arabicum HOM05D002285 ORTHO05D004192 1.2e-44 183.3 132 65.2
AL3G22990 Arabidopsis lyrata HOM05D002285 ORTHO05D004192 1.5e-44 183.0 132 64.4
Aa31LG3G4810 Aethionema arabicum HOM05D002285 ORTHO05D004192 2.6e-44 182.2 132 64.4
CAN.G74.14 Capsicum annuum HOM05D002285 ORTHO05D004192 3.5e-44 181.8 136 61.8
Sp6g36800 Schrenkiella parvula HOM05D002285 ORTHO05D004192 3.5e-44 181.8 125 63.2
Mapoly0114s0007 Marchantia polymorpha HOM05D002285 ORTHO05D004192 5.9e-44 181.0 129 62.0
Carub.0006s0498 Capsella rubella HOM05D002285 ORTHO05D004192 1.0e-43 180.3 132 60.6
SHI11339 Sapria himalayana HOM05D002285 ORTHO05D004192 1.3e-43 179.9 132 61.4
CARHR206810 Cardamine hirsuta HOM05D002285 ORTHO05D004192 2.2e-43 179.1 125 61.6
Pp3c14_5130 Physcomitrium patens HOM05D002285 ORTHO05D004192 3.2e-42 175.3 132 61.4
CBR_g1010 Chara braunii HOM05D002285 ORTHO05D004192 4.2e-42 174.9 132 61.4
unitig_8.g3024 Utricularia gibba HOM05D002285 ORTHO05D004192 4.7e-41 171.4 110 69.1
Pp3c12_1320 Physcomitrium patens HOM05D002285 ORTHO05D004192 8.0e-41 170.6 132 60.6
Pp3c17_1730 Physcomitrium patens HOM05D002285 ORTHO05D004192 1.8e-40 169.5 132 56.8
Gohir.D06G181300 Gossypium hirsutum HOM05D002285 ORTHO05D004192 4.4e-39 164.9 132 61.4
SMO367G0595 Selaginella moellendorffii HOM05D002285 ORTHO05D004192 7.4e-39 164.1 132 56.8
BcaB01g05745 Brassica carinata HOM05D002285 ORTHO05D004192 5.9e-36 154.5 96 66.7
A03p02550 Brassica napus HOM05D002285 ORTHO05D004192 1.3e-35 153.3 93 68.8
BraA03t09616Z Brassica rapa HOM05D002285 ORTHO05D004192 1.3e-35 153.3 93 68.8
AT5G06110 Arabidopsis thaliana HOM05D002285 ORTHO05D004192 1.5e-34 149.8 93 71.0
C03p44920 Brassica napus HOM05D002285 ORTHO05D004192 1.9e-34 149.4 127 56.7
BolC3t16752H Brassica oleracea HOM05D002285 ORTHO05D004192 2.5e-34 149.1 127 56.7
BcaB01g05971 Brassica carinata HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
A03p02530 Brassica napus HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
C03p02870 Brassica napus HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
C03p02880 Brassica napus HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
BolC3t12842H Brassica oleracea HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
BolC3t12844H Brassica oleracea HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
BraA03t09614Z Brassica rapa HOM05D002285 ORTHO05D004192 5.5e-34 147.9 91 68.1
Cre01.g003376 Chlamydomonas reinhardtii HOM05D002285 ORTHO05D004192 5.5e-34 147.9 135 51.1
BcaB01g05739 Brassica carinata HOM05D002285 ORTHO05D004192 1.6e-33 146.4 91 68.1
A03p37070 Brassica napus HOM05D002285 ORTHO05D004192 2.1e-33 146.0 125 56.8
BraA03t12869Z Brassica rapa HOM05D002285 ORTHO05D004192 2.7e-33 145.6 125 56.8
BcaB04g18640 Brassica carinata HOM05D002285 ORTHO05D004192 3.0e-32 142.1 127 51.2
BcaB01g05973 Brassica carinata HOM05D002285 ORTHO05D004192 4.4e-31 138.3 91 65.9
Oeu037828.3 Olea europaea HOM05D002285 ORTHO05D004192 3.5e-28 128.6 75 74.7
RcHm_v2.0_Chr2g0099031 Rosa chinensis HOM05D002285 ORTHO05D004192 1.7e-22 109.8 143 41.3
PRCOL_00001735 Prasinoderma coloniale HOM05D002285 ORTHO05D004192 1.0e-19 100.5 131 38.9
FvH4_1g11450 Fragaria vesca HOM05D002285 ORTHO05D004192 1.7e-19 99.8 129 38.0
FAN19G2233 Fragaria x ananassa HOM05D002285 ORTHO05D004192 1.7e-19 99.8 129 38.0
FvH4_1g11431 Fragaria vesca HOM05D002285 ORTHO05D004192 1.9e-18 96.3 139 36.7
BcaB01g05741 Brassica carinata HOM05D002285 ORTHO05D004192 7.2e-18 94.4 56 66.1
Zm00001eb391470 Zea mays HOM05D002285 ORTHO05D004192 9.5e-18 94.0 81 55.6
Zm00001eb391480 Zea mays HOM05D002285 ORTHO05D004192 2.1e-17 92.8 76 53.9
C06p44380 Brassica napus HOM05D002285 ORTHO05D004192 4.7e-17 91.7 54 68.5
Cfa026155 Carpinus fangiana HOM05D002285 ORTHO05D004192 2.6e-15 85.9 127 38.6
BraA02t07122Z Brassica rapa HOM05D002285 ORTHO05D004192 4.4e-15 85.1 70 55.7
AL6G16060 Arabidopsis lyrata HOM05D002285 ORTHO05D004192 7.5e-15 84.3 46 78.3
MCO14G048 Micromonas commoda HOM05D002285 ORTHO05D004192 1.8e-13 79.7 132 37.1
BcaC01g04986 Brassica carinata HOM05D002285 ORTHO05D004192 5.0e-11 71.6 41 68.3
Nn5g30795 Nelumbo nucifera HOM05D002285 ORTHO05D004192 8.0e-09 64.3 35 80.0
Mapoly0088s0065 Marchantia polymorpha HOM05D004083 ORTHO05D005029 5.2e-08 61.6 161 28.6
RcHm_v2.0_Chr7g0200711 Rosa chinensis HOM05D004083 ORTHO05D005029 1.2e-07 60.5 155 29.0
Pp3c5_3270 Physcomitrium patens HOM05D004083 ORTHO05D005029 1.7e-06 56.6 167 28.7
SMO203G0173 Selaginella moellendorffii HOM05D004083 ORTHO05D005029 4.9e-06 55.1 163 27.6


User provided reference genes

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