Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 2.1e-270 935.3 491 100.0
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 3.6e-206 721.8 476 81.9
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 1.9e-170 603.2 489 71.6
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.5e-151 540.4 539 58.6
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.3e-142 510.8 529 55.8
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.7e-139 500.4 538 56.5
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 3.8e-139 499.2 523 57.4
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.9e-138 496.9 493 59.8
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 2.1e-137 493.4 495 59.4
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 5.2e-136 488.8 537 55.9
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.5e-135 487.3 566 54.4
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 9.7e-135 484.6 532 55.5
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.4e-133 480.7 495 58.2
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.4e-133 479.9 536 54.5
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 2.0e-132 476.9 498 56.2
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 6.5e-131 471.9 531 54.0
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 2.5e-130 469.9 536 54.5
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 4.2e-130 469.2 536 53.9
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 7.2e-130 468.4 490 58.6
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.2e-129 467.6 497 57.1
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.2e-127 461.1 536 53.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.0e-127 460.3 550 52.9
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 3.4e-127 459.5 504 55.0
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 2.7e-124 449.9 538 50.4
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 5.9e-124 448.7 498 56.2
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.1e-122 444.5 495 56.4
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 3.2e-122 443.0 495 56.2
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.1e-121 440.3 496 55.4
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 4.7e-121 439.1 496 55.0
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 2.6e-119 433.3 492 56.1
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 4.4e-119 432.6 554 50.5
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 9.8e-119 431.4 504 53.0
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.3e-118 431.0 496 54.2
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 7.0e-117 425.2 550 50.5
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 1.2e-116 424.5 495 55.2
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 5.9e-116 422.2 499 52.1
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 1.3e-115 421.0 496 53.2
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 2.9e-115 419.9 507 52.7
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 3.8e-115 419.5 495 52.1
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 3.8e-115 419.5 499 51.9
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 3.3e-114 416.4 622 46.3
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 5.6e-114 415.6 556 49.3
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.6e-113 414.1 556 49.1
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.0e-112 411.4 496 50.4
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 3.0e-112 409.8 557 49.0
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 5.2e-112 409.1 506 51.0
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 4.4e-111 406.0 505 50.7
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 9.2e-109 398.3 465 53.1
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 2.3e-107 393.7 533 49.5
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.1e-106 391.3 444 55.6
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 7.3e-106 388.7 496 51.0
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.0e-103 380.6 470 52.1
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 3.4e-103 379.8 492 49.8
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 7.5e-103 378.6 491 50.1
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 1.3e-102 377.9 500 49.0
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 1.3e-102 377.9 500 49.0
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.1e-101 374.8 485 50.1
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 9.2e-101 371.7 489 50.1
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.5e-100 369.8 485 49.9
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 6.0e-100 369.0 494 48.8
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 1.3e-99 367.9 489 49.9
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 6.6e-99 365.5 489 49.1
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 1.1e-98 364.8 417 53.5
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 1.9e-98 364.0 455 53.2
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 9.5e-98 361.7 434 53.2
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 2.8e-97 360.1 529 45.7
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 6.2e-97 359.0 465 49.2
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 1.3e-94 351.3 420 53.8
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 7.1e-93 345.5 488 46.9
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 1.6e-89 334.3 489 46.8
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 5.8e-87 325.9 355 55.5
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 1.2e-84 318.2 492 45.7
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 3.5e-84 316.6 410 52.2
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.3e-83 314.7 427 48.7
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 1.2e-79 301.6 492 44.5
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 2.2e-78 297.4 423 48.9
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 8.4e-78 295.4 372 51.1
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 2.0e-71 274.2 394 45.4
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 3.9e-67 260.0 256 58.2
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 2.4e-61 240.7 285 54.0
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 3.4e-55 220.3 285 52.3
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 3.4e-47 193.7 292 46.2
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.3e-43 181.0 144 74.3
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 1.8e-32 144.8 204 46.1
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.5e-26 125.2 112 54.5
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.5e-26 125.2 179 42.5
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.0e-26 124.8 302 34.1
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.8e-24 118.2 450 28.0
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.0e-22 112.5 177 42.9
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 2.9e-22 110.9 79 77.2
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.9e-22 110.9 76 77.6
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 6.5e-22 109.8 64 82.8
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 6.5e-22 109.8 531 32.0
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 2.8e-17 94.4 73 63.0
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.9e-14 84.3 53 84.9
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 1.4e-11 75.5 39 97.4
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 5.2e-11 73.6 106 50.9
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 2.0e-10 71.6 81 55.6
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 4.8e-09 67.0 73 46.6
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.4e-08 65.5 44 77.3
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 4.1e-08 63.9 73 45.2
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.0e-07 61.6 73 43.8
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 5.0e-06 57.0 60 55.0
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 5.0e-06 57.0 60 55.0


User provided reference genes

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