Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0080731 Helianthus annuus HOM05D000668 ORTHO05D000516 2.8e-79 298.5 147 100.0
HanXRQChr13g0411301 Helianthus annuus HOM05D000668 ORTHO05D000516 1.0e-25 120.6 85 71.8
Lsat_1_v5_gn_5_53261 Lactuca sativa HOM05D000668 ORTHO05D000516 8.3e-23 110.9 93 67.7
ECA240G1238 Erigeron canadensis HOM05D000668 ORTHO05D000516 1.3e-20 103.6 75 72.0
Hma1.2p1_0078F.1_g040560 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 4.1e-14 82.0 91 59.3
Hma1.2p1_3290F.1_g334910 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 4.1e-14 82.0 91 59.3
Dinv29741 Davidia involucrata HOM05D000668 ORTHO05D000516 1.3e-12 77.0 87 56.3
TAR365G0715 Trochodendron aralioides HOM05D000668 ORTHO05D000516 1.7e-12 76.6 86 53.5
Dinv44382 Davidia involucrata HOM05D000668 ORTHO05D000516 1.1e-11 73.9 90 54.4
TAR636G0737 Trochodendron aralioides HOM05D000668 ORTHO05D000516 1.5e-11 73.6 85 48.2
Sabra05G0031300 Salix brachista HOM05D000668 ORTHO05D000516 2.5e-11 72.8 92 46.7
Thecc.01G297000 Theobroma cacao HOM05D000668 ORTHO05D000516 3.3e-11 72.4 77 55.8
CANSAT78G0305 Cannabis sativa HOM05D000668 ORTHO05D000516 5.6e-11 71.6 82 45.1
TAR362G0455 Trochodendron aralioides HOM05D000668 ORTHO05D000516 5.6e-11 71.6 86 48.8
Gohir.A11G115300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 7.3e-11 71.2 71 49.3
Hma1.2p1_1292F.1_g273690 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 9.5e-11 70.9 75 54.7
Manes.05G064300 Manihot esculenta HOM05D000668 ORTHO05D000516 1.2e-10 70.5 72 51.4
Potri.005G025800 Populus trichocarpa HOM05D000668 ORTHO05D000516 1.6e-10 70.1 61 55.7
ClCG06G005140 Citrullus lanatus HOM05D000668 ORTHO05D000516 2.8e-10 69.3 79 50.6
COL.COLO4_23376 Corchorus olitorius HOM05D000668 ORTHO05D000516 2.8e-10 69.3 81 49.4
Dinv19718 Davidia involucrata HOM05D000668 ORTHO05D000516 2.8e-10 69.3 68 54.4
Dinv30805 Davidia involucrata HOM05D000668 ORTHO05D000516 2.8e-10 69.3 87 49.4
QL06p008855 Quercus lobata HOM05D000668 ORTHO05D000516 2.8e-10 69.3 79 53.2
Duzib133G0092 Durio zibethinus HOM05D000668 ORTHO05D000516 3.6e-10 68.9 79 48.1
Actinidia24836 Actinidia chinensis HOM05D000668 ORTHO05D000516 4.7e-10 68.6 86 48.8
TAR633G1015 Trochodendron aralioides HOM05D000668 ORTHO05D000516 4.7e-10 68.6 86 47.7
Ciclev10006201m.g Citrus clementina HOM05D000668 ORTHO05D000516 6.1e-10 68.2 81 50.6
Duzib138G0285 Durio zibethinus HOM05D000668 ORTHO05D000516 6.1e-10 68.2 79 46.8
Nn3g21435 Nelumbo nucifera HOM05D000668 ORTHO05D000516 6.1e-10 68.2 79 49.4
CAN.G185.13 Capsicum annuum HOM05D000668 ORTHO05D000516 1.0e-09 67.4 89 44.9
TWI12G0335 Tripterygium wilfordii HOM05D000668 ORTHO05D000516 1.0e-09 67.4 84 51.2
GSVIVG01017757001 Vitis vinifera HOM05D000668 ORTHO05D000516 1.4e-09 67.0 88 48.9
Gohir.D11G120300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 3.1e-09 65.9 71 46.5
Gorai.007G129000 Gossypium raimondii HOM05D000668 ORTHO05D000516 3.1e-09 65.9 71 46.5
MBI18_g21828_MAGBIO Magnolia biondii HOM05D000668 ORTHO05D000516 3.1e-09 65.9 81 53.1
Potri.013G017400 Populus trichocarpa HOM05D000668 ORTHO05D000516 3.1e-09 65.9 95 44.2
Nn4g25851 Nelumbo nucifera HOM05D000668 ORTHO05D000516 4.0e-09 65.5 85 43.5
Aqoxy5G00719 Aquilegia oxysepala HOM05D000668 ORTHO05D000516 5.2e-09 65.1 83 49.4
Sed0002437 Sechium edule HOM05D000668 ORTHO05D000516 5.2e-09 65.1 86 45.3
Potri.014G131800 Populus trichocarpa HOM05D000668 ORTHO05D000516 6.8e-09 64.7 74 48.6
CSS0034518 Camellia sinensis var. sinensis HOM05D000668 ORTHO05D000516 8.9e-09 64.3 61 60.7
CiPaw.01G148800 Carya illinoinensis HOM05D000668 ORTHO05D000516 8.9e-09 64.3 76 50.0
DCAR_022149 Daucus carota HOM05D000668 ORTHO05D000516 8.9e-09 64.3 77 48.1
Dinv40341 Davidia involucrata HOM05D000668 ORTHO05D000516 8.9e-09 64.3 83 49.4
Sabra14G0098000 Salix brachista HOM05D000668 ORTHO05D000516 8.9e-09 64.3 73 50.7
DCAR_003353 Daucus carota HOM05D000668 ORTHO05D000516 1.2e-08 63.9 73 46.6
MD03G1284900 Malus domestica HOM05D000668 ORTHO05D000516 1.2e-08 63.9 75 44.0
Manes.09G169900 Manihot esculenta HOM05D000668 ORTHO05D000516 1.2e-08 63.9 84 48.8
Sabra13G0016400 Salix brachista HOM05D000668 ORTHO05D000516 1.2e-08 63.9 93 44.1
Cpa.g.sc16.170 Carica papaya HOM05D000668 ORTHO05D000516 1.5e-08 63.5 82 47.6
Prupe.6G321200 Prunus persica HOM05D000668 ORTHO05D000516 2.0e-08 63.2 82 51.2
COL.COLO4_10515 Corchorus olitorius HOM05D000668 ORTHO05D000516 3.4e-08 62.4 87 46.0
Hma1.2p1_0209F.1_g088620 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 3.4e-08 62.4 81 49.4
TWI56G0658 Tripterygium wilfordii HOM05D000668 ORTHO05D000516 3.4e-08 62.4 77 51.9
Gorai.007G299900 Gossypium raimondii HOM05D000668 ORTHO05D000516 4.4e-08 62.0 84 46.4
Hma1.2p1_1212F.1_g267290 Hydrangea macrophylla HOM05D000668 ORTHO05D000516 4.4e-08 62.0 83 45.8
QL12p027130 Quercus lobata HOM05D000668 ORTHO05D000516 5.8e-08 61.6 87 41.4
Cpa.g.sc48.92 Carica papaya HOM05D000668 ORTHO05D000516 7.5e-08 61.2 82 56.1
Duzib128G0017 Durio zibethinus HOM05D000668 ORTHO05D000516 9.8e-08 60.8 83 47.0
ATR0796G076 Amborella trichopoda HOM05D000668 ORTHO05D000516 1.3e-07 60.5 78 46.2
Gohir.A11G267800 Gossypium hirsutum HOM05D000668 ORTHO05D000516 1.3e-07 60.5 64 53.1
MBI19_g29224_MAGBIO Magnolia biondii HOM05D000668 ORTHO05D000516 1.3e-07 60.5 85 45.9
Manes.08G118000 Manihot esculenta HOM05D000668 ORTHO05D000516 1.3e-07 60.5 83 43.4
VMungo0720G0131 Vigna mungo HOM05D000668 ORTHO05D000516 1.7e-07 60.1 86 47.7
Ciclev10002897m.g Citrus clementina HOM05D000668 ORTHO05D000516 2.2e-07 59.7 86 46.5
Ciclev10023750m.g Citrus clementina HOM05D000668 ORTHO05D000516 2.2e-07 59.7 85 44.7
Gohir.D10G170300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 2.2e-07 59.7 86 46.5
MD04G1201100 Malus domestica HOM05D000668 ORTHO05D000516 2.2e-07 59.7 84 47.6
MD16G1025500 Malus domestica HOM05D000668 ORTHO05D000516 2.2e-07 59.7 86 43.0
QL10p053329 Quercus lobata HOM05D000668 ORTHO05D000516 2.2e-07 59.7 87 40.2
QL10p054530 Quercus lobata HOM05D000668 ORTHO05D000516 2.2e-07 59.7 87 40.2
Cfa006625 Carpinus fangiana HOM05D000668 ORTHO05D000516 2.9e-07 59.3 84 50.0
Manes.15G012500 Manihot esculenta HOM05D000668 ORTHO05D000516 2.9e-07 59.3 84 44.0
Thecc.05G312600 Theobroma cacao HOM05D000668 ORTHO05D000516 2.9e-07 59.3 87 44.8
TWI14G0096 Tripterygium wilfordii HOM05D000668 ORTHO05D000516 2.9e-07 59.3 85 41.2
CANSAT54G2300 Cannabis sativa HOM05D000668 ORTHO05D000516 3.7e-07 58.9 82 43.9
Glyma.10G152000 Glycine max HOM05D000668 ORTHO05D000516 3.7e-07 58.9 86 48.8
Glyma.20G236400 Glycine max HOM05D000668 ORTHO05D000516 3.7e-07 58.9 87 42.5
Gohir.D01G023481 Gossypium hirsutum HOM05D000668 ORTHO05D000516 3.7e-07 58.9 86 45.3
Gorai.011G190000 Gossypium raimondii HOM05D000668 ORTHO05D000516 3.7e-07 58.9 84 51.2
Nn5g30454 Nelumbo nucifera HOM05D000668 ORTHO05D000516 3.7e-07 58.9 72 43.1
Prupe.8G258000 Prunus persica HOM05D000668 ORTHO05D000516 3.7e-07 58.9 85 42.4
Haze_04143 Corylus avellana HOM05D000668 ORTHO05D000516 4.9e-07 58.5 84 48.8
COL.COLO4_13872 Corchorus olitorius HOM05D000668 ORTHO05D000516 6.4e-07 58.2 75 48.0
Duzib212G0565 Durio zibethinus HOM05D000668 ORTHO05D000516 6.4e-07 58.2 83 47.0
Gohir.A01G032800 Gossypium hirsutum HOM05D000668 ORTHO05D000516 6.4e-07 58.2 85 44.7
Phvul.007G197000 Phaseolus vulgaris HOM05D000668 ORTHO05D000516 6.4e-07 58.2 87 46.0
Rhsim13G0012600 Rhododendron simsii HOM05D000668 ORTHO05D000516 6.4e-07 58.2 80 47.5
Haze_04895 Corylus avellana HOM05D000668 ORTHO05D000516 8.3e-07 57.8 84 39.3
Gorai.002G028300 Gossypium raimondii HOM05D000668 ORTHO05D000516 8.3e-07 57.8 85 44.7
MD16G1024600 Malus domestica HOM05D000668 ORTHO05D000516 8.3e-07 57.8 88 44.3
vmacro02469 Vaccinium macrocarpon HOM05D000668 ORTHO05D000516 8.3e-07 57.8 82 46.3
Aqoxy2G02986 Aquilegia oxysepala HOM05D000668 ORTHO05D000516 1.1e-06 57.4 81 46.9
Ca_10128_v3 Cicer arietinum L. HOM05D000668 ORTHO05D000516 1.1e-06 57.4 88 44.3
Peaxi162Scf00048g00207 Petunia axillaris HOM05D059398 ORTHO05D050238 1.1e-06 57.4 86 41.9
Sabra13G0020400 Salix brachista HOM05D000668 ORTHO05D000516 1.1e-06 57.4 67 49.3
THA.LOC104818714 Tarenaya hassleriana HOM05D000668 ORTHO05D000516 1.1e-06 57.4 75 49.3
Actinidia35563 Actinidia chinensis HOM05D000668 ORTHO05D000516 1.4e-06 57.0 62 51.6
MSTRG.27981 Avicennia marina HOM05D000668 ORTHO05D000516 1.4e-06 57.0 69 50.7
Cfa005951 Carpinus fangiana HOM05D000668 ORTHO05D000516 1.4e-06 57.0 87 42.5
Gohir.D02G054300 Gossypium hirsutum HOM05D000668 ORTHO05D000516 1.4e-06 57.0 84 47.6
Peaxi162Scf00067g00252 Petunia axillaris HOM05D000668 ORTHO05D000516 1.4e-06 57.0 79 49.4
QL03p021055 Quercus lobata HOM05D000668 ORTHO05D000516 1.4e-06 57.0 62 48.4
FvH4_2g25351 Fragaria vesca HOM05D000668 ORTHO05D000516 1.9e-06 56.6 79 44.3
FAN24G3138 Fragaria x ananassa HOM05D000668 ORTHO05D000516 1.9e-06 56.6 79 44.3
FAN27G0851 Fragaria x ananassa HOM05D000668 ORTHO05D000516 1.9e-06 56.6 79 44.3
Medtr4g119860 Medicago truncatula HOM05D000668 ORTHO05D000516 1.9e-06 56.6 75 48.0
Rhsim13G0012700 Rhododendron simsii HOM05D000668 ORTHO05D000516 1.9e-06 56.6 83 44.6
PGSC0003DMG400022851 Solanum tuberosum HOM05D059398 ORTHO05D050238 1.9e-06 56.6 95 42.1
Gohir.A10G163900 Gossypium hirsutum HOM05D000668 ORTHO05D000516 2.4e-06 56.2 84 47.6
Gohir.D08G225600 Gossypium hirsutum HOM05D000668 ORTHO05D000516 2.4e-06 56.2 86 43.0
Gorai.004G239600 Gossypium raimondii HOM05D000668 ORTHO05D000516 2.4e-06 56.2 86 43.0
MD12G1213600 Malus domestica HOM05D000668 ORTHO05D000516 2.4e-06 56.2 82 42.7
THA.LOC104821723 Tarenaya hassleriana HOM05D000668 ORTHO05D000516 2.4e-06 56.2 75 48.0
Lj4g0026721 Lotus japonicus HOM05D000668 ORTHO05D000516 3.2e-06 55.8 88 50.0
Aa31LG8G3710 Aethionema arabicum HOM05D000668 ORTHO05D000516 4.1e-06 55.5 92 42.4
Haze_01205 Corylus avellana HOM05D000668 ORTHO05D000516 4.1e-06 55.5 77 41.6
Duzib151G0725 Durio zibethinus HOM05D000668 ORTHO05D000516 4.1e-06 55.5 84 47.6
MD11G1304400 Malus domestica HOM05D000668 ORTHO05D000516 4.1e-06 55.5 75 41.3
MD16G1025200 Malus domestica HOM05D000668 ORTHO05D000516 4.1e-06 55.5 76 43.4
Manes.03G194800 Manihot esculenta HOM05D000668 ORTHO05D000516 4.1e-06 55.5 84 42.9
Nn4g25852 Nelumbo nucifera HOM05D000668 ORTHO05D000516 4.1e-06 55.5 87 42.5
Rhsim07G0187600 Rhododendron simsii HOM05D000668 ORTHO05D000516 4.1e-06 55.5 85 42.4
Eucgr.H01161 Eucalyptus grandis HOM05D000668 ORTHO05D000516 5.4e-06 55.1 81 44.4
FAN20G0886 Fragaria x ananassa HOM05D000668 ORTHO05D000516 5.4e-06 55.1 79 44.3
Gohir.D08G052800 Gossypium hirsutum HOM05D000668 ORTHO05D000516 5.4e-06 55.1 81 39.5
Gorai.004G052800 Gossypium raimondii HOM05D000668 ORTHO05D000516 5.4e-06 55.1 81 39.5
Atru.chr2.27 Acer truncatum HOM05D000668 ORTHO05D000516 7.0e-06 54.7 86 45.3
CiPaw.07G106300 Carya illinoinensis HOM05D000668 ORTHO05D000516 7.0e-06 54.7 88 37.5
Duzib052G0676 Durio zibethinus HOM05D000668 ORTHO05D000516 7.0e-06 54.7 79 45.6
Sed0020473 Sechium edule HOM05D000668 ORTHO05D000516 7.0e-06 54.7 81 45.7
SGA_v2.0_scaffold2G01406 Striga asiatica HOM05D000668 ORTHO05D000516 7.0e-06 54.7 52 55.8
Gohir.D11G277700 Gossypium hirsutum HOM05D000668 ORTHO05D000516 9.2e-06 54.3 84 44.0
TPR.G39809 Trifolium pratense HOM05D000668 ORTHO05D000516 9.2e-06 54.3 75 46.7


User provided reference genes

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