Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 8.9e-145 516.9 261 100.0
HanXRQChr03g0080081 Helianthus annuus HOM05D007369 ORTHO05D009369 8.7e-92 340.9 173 100.0
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.2e-88 330.5 260 69.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 2.0e-43 180.3 233 49.4
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 6.3e-42 175.3 349 38.4
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.4e-41 174.1 265 43.4
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.2e-40 171.0 310 38.7
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 7.7e-40 168.3 304 39.8
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 3.8e-39 166.0 309 37.2
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 5.0e-39 165.6 262 41.6
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.1e-37 160.2 270 41.5
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 2.8e-37 159.8 308 37.0
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.6e-37 159.5 264 41.3
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.0e-36 157.9 297 38.4
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.8e-36 157.1 171 50.9
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.3e-36 156.8 293 38.6
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 3.0e-36 156.4 300 37.7
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.0e-36 156.0 308 36.7
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 6.8e-36 155.2 269 40.5
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.2e-35 154.5 288 39.6
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.2e-35 154.5 302 37.7
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.2e-35 154.5 299 39.5
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-35 154.1 294 40.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.0e-35 153.7 241 41.9
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.6e-35 153.3 269 39.0
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 7.5e-35 151.8 305 38.0
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 7.5e-35 151.8 309 34.6
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.3e-34 151.0 310 34.8
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.7e-34 150.6 288 38.9
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.9e-34 149.8 312 36.5
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.9e-34 149.8 313 36.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.4e-33 147.5 303 38.3
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.4e-33 147.5 240 40.8
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.8e-33 147.1 255 38.4
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 7.0e-33 145.2 271 37.6
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 1.6e-32 144.1 274 39.1
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.6e-32 144.1 274 39.1
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.5e-32 142.9 277 37.9
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 4.6e-32 142.5 278 37.8
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 4.6e-32 142.5 294 39.1
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 4.6e-32 142.5 279 37.3
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 7.8e-32 141.7 297 36.4
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 7.8e-32 141.7 301 35.9
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.3e-31 140.2 273 39.2
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.3e-31 140.2 274 38.7
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 2.3e-31 140.2 298 36.6
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.0e-31 139.8 297 35.7
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 5.0e-31 139.0 266 39.8
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 6.6e-31 138.7 280 36.4
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.1e-30 137.9 280 37.9
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 1.5e-30 137.5 261 38.7
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.6e-30 135.6 301 36.2
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 9.5e-30 134.8 277 37.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.6e-29 134.0 262 37.8
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.8e-29 133.3 172 48.8
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 3.6e-29 132.9 292 35.6
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 8.0e-29 131.7 307 32.9
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.4e-28 131.0 267 37.5
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 8.9e-28 128.3 157 47.1
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 1.3e-26 124.4 304 33.2
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.3e-26 124.4 172 43.6
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 2.2e-26 123.6 184 42.4
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 3.7e-26 122.9 267 37.8
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 8.3e-26 121.7 281 34.5
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.1e-25 121.3 309 33.0
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 2.4e-25 120.2 288 35.4
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 3.2e-25 119.8 252 37.3
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.0e-25 118.6 124 54.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 7.0e-25 118.6 269 34.9
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 2.7e-24 116.7 181 42.0
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 6.0e-24 115.5 308 33.4
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 6.0e-24 115.5 304 33.6
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.0e-23 114.8 158 44.3
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.0e-23 112.5 253 35.6
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 6.6e-23 112.1 288 32.3
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.6e-23 112.1 284 34.2
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.5e-22 110.2 91 63.7
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 6.8e-20 102.1 282 30.9
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 4.9e-18 95.9 159 40.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 9.2e-17 91.7 227 30.8
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.7e-15 87.4 206 32.0
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 4.3e-14 82.8 88 48.9
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 3.6e-13 79.7 213 32.4
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 4.7e-13 79.3 235 30.6
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 8.9e-12 75.1 100 46.0
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.9e-09 67.4 75 45.3
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.4e-09 65.9 293 28.0
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 2.7e-08 63.5 151 35.1
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 4.6e-08 62.8 228 28.9


User provided reference genes

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