Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0079781 Helianthus annuus HOM05D001685 ORTHO05D007488 5.3e-59 230.7 108 100.0
HanXRQChr05g0152631 Helianthus annuus HOM05D001685 ORTHO05D007488 5.3e-59 230.7 108 100.0
HanXRQChr03g0079811 Helianthus annuus HOM05D001685 ORTHO05D007488 1.3e-57 226.1 108 97.2
ECA240G2366 Erigeron canadensis HOM05D001685 ORTHO05D007488 6.7e-54 213.8 106 91.5
Lsat_1_v5_gn_5_51241 Lactuca sativa HOM05D001685 ORTHO05D007488 2.8e-44 181.8 97 85.6
GSVIVG01017775001 Vitis vinifera HOM05D001685 ORTHO05D007488 1.1e-43 179.9 108 75.9
CANSAT78G0268 Cannabis sativa HOM05D001685 ORTHO05D007488 3.1e-43 178.3 105 74.3
CSS0000799 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 2.6e-42 175.3 106 75.5
Actinidia01944 Actinidia chinensis HOM05D001685 ORTHO05D007488 1.0e-41 173.3 106 72.6
Thecc.04G280200 Theobroma cacao HOM05D001685 ORTHO05D007488 1.3e-41 172.9 108 72.2
COL.COLO4_13905 Corchorus olitorius HOM05D001685 ORTHO05D007488 1.7e-41 172.6 108 74.1
Cfa015363 Carpinus fangiana HOM05D001685 ORTHO05D007488 2.2e-41 172.2 108 72.2
Haze_01243 Corylus avellana HOM05D001685 ORTHO05D007488 2.2e-41 172.2 108 72.2
Prupe.1G139700 Prunus persica HOM05D001685 ORTHO05D007488 2.9e-41 171.8 108 70.4
QL06p008035 Quercus lobata HOM05D001685 ORTHO05D007488 3.8e-41 171.4 108 74.1
Rhsim04G0218700 Rhododendron simsii HOM05D001685 ORTHO05D007488 4.9e-41 171.0 107 72.0
CiPaw.01G151100 Carya illinoinensis HOM05D001685 ORTHO05D007488 8.4e-41 170.2 108 71.3
ClCG05G005930 Citrullus lanatus HOM05D001685 ORTHO05D007488 8.4e-41 170.2 106 70.8
Glyma.13G216800 Glycine max HOM05D001685 ORTHO05D007488 1.1e-40 169.9 107 71.0
MD16G1172900 Malus domestica HOM05D001685 ORTHO05D007488 1.1e-40 169.9 108 71.3
TAR636G1751 Trochodendron aralioides HOM05D001685 ORTHO05D007488 1.1e-40 169.9 108 72.2
MSTRG.3936 Avicennia marina HOM05D001685 ORTHO05D007488 1.9e-40 169.1 103 74.8
Ciclev10004482m.g Citrus clementina HOM05D001685 ORTHO05D007488 1.9e-40 169.1 108 70.4
Oeu021113.2 Olea europaea HOM05D001685 ORTHO05D007488 1.9e-40 169.1 102 73.5
Phvul.006G163000 Phaseolus vulgaris HOM05D001685 ORTHO05D007488 1.9e-40 169.1 107 69.2
arahy.Tifrunner.gnm1.ann1.ADAJ08 Arachis hypogaea HOM05D001685 ORTHO05D007488 2.5e-40 168.7 107 70.1
FvH4_4g17620 Fragaria vesca HOM05D001685 ORTHO05D007488 2.5e-40 168.7 106 71.7
FAN12G2140 Fragaria x ananassa HOM05D001685 ORTHO05D007488 2.5e-40 168.7 106 71.7
Lj6g0018727 Lotus japonicus HOM05D001685 ORTHO05D007488 2.5e-40 168.7 107 69.2
arahy.Tifrunner.gnm1.ann1.536D4K Arachis hypogaea HOM05D001685 ORTHO05D007488 3.2e-40 168.3 107 70.1
EL10Ac3g06577 Beta vulgaris HOM05D001685 ORTHO05D007488 3.2e-40 168.3 107 70.1
Hund17597 Selenicereus undatus HOM05D001685 ORTHO05D007488 4.2e-40 167.9 107 67.3
FAN17G0087 Fragaria x ananassa HOM05D001685 ORTHO05D007488 5.5e-40 167.5 106 71.7
FAN07G1165 Fragaria x ananassa HOM05D001685 ORTHO05D007488 7.1e-40 167.2 106 70.8
Lalb_Chr18g0055611 Lupinus albus HOM05D001685 ORTHO05D007488 9.3e-40 166.8 106 69.8
Manes.15G014800 Manihot esculenta HOM05D001685 ORTHO05D007488 9.3e-40 166.8 102 75.5
Nitab4.5_0000644g0130 Nicotiana tabacum HOM05D001685 ORTHO05D007488 9.3e-40 166.8 103 74.8
Cc03_g02120 Coffea canephora HOM05D001685 ORTHO05D007488 1.2e-39 166.4 103 70.9
FAN22G0503 Fragaria x ananassa HOM05D001685 ORTHO05D007488 1.6e-39 166.0 106 69.8
Peaxi162Scf00386g00526 Petunia axillaris HOM05D001685 ORTHO05D007488 2.1e-39 165.6 94 78.7
RcHm_v2.0_Chr4g0421541 Rosa chinensis HOM05D001685 ORTHO05D007488 2.1e-39 165.6 106 69.8
THA.LOC104802719 Tarenaya hassleriana HOM05D001685 ORTHO05D007488 2.1e-39 165.6 107 69.2
Hma1.2p1_0698F.1_g205400 Hydrangea macrophylla HOM05D001685 ORTHO05D007488 2.7e-39 165.2 92 80.4
Nitab4.5_0000784g0140 Nicotiana tabacum HOM05D001685 ORTHO05D007488 4.6e-39 164.5 103 72.8
Medtr2g019790 Medicago truncatula HOM05D001685 ORTHO05D007488 6.0e-39 164.1 106 68.9
Sed0007220 Sechium edule HOM05D001685 ORTHO05D007488 6.0e-39 164.1 106 70.8
Cpa.g.sc16.146 Carica papaya HOM05D001685 ORTHO05D007488 7.9e-39 163.7 107 68.2
Eucgr.H03869 Eucalyptus grandis HOM05D001685 ORTHO05D007488 7.9e-39 163.7 107 66.4
Gohir.D10G168700 Gossypium hirsutum HOM05D001685 ORTHO05D007488 7.9e-39 163.7 108 71.3
Gorai.011G188100 Gossypium raimondii HOM05D001685 ORTHO05D007488 7.9e-39 163.7 108 71.3
MELO3C006624.2 Cucumis melo HOM05D001685 ORTHO05D007488 1.0e-38 163.3 106 69.8
VMungo0540G1912 Vigna mungo HOM05D001685 ORTHO05D007488 1.3e-38 162.9 107 66.4
Atru.chr4.2789 Acer truncatum HOM05D001685 ORTHO05D007488 1.8e-38 162.5 107 70.1
Potri.010G022400 Populus trichocarpa HOM05D001685 ORTHO05D007488 2.3e-38 162.2 106 69.8
CARHR194450 Cardamine hirsuta HOM05D001685 ORTHO05D007488 3.9e-38 161.4 108 67.6
CSS0036229 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 5.1e-38 161.0 89 80.9
Sabra10G0015900 Salix brachista HOM05D001685 ORTHO05D007488 6.7e-38 160.6 107 70.1
TWI09G0695 Tripterygium wilfordii HOM05D001685 ORTHO05D007488 6.7e-38 160.6 108 66.7
AL6G29840 Arabidopsis lyrata HOM05D001685 ORTHO05D007488 8.7e-38 160.2 108 66.7
AT5G18570 Arabidopsis thaliana HOM05D001685 ORTHO05D007488 1.1e-37 159.8 108 65.7
Carub.0006s1685 Capsella rubella HOM05D001685 ORTHO05D007488 1.1e-37 159.8 108 66.7
BcaC03g13609 Brassica carinata HOM05D001685 ORTHO05D007488 1.9e-37 159.1 108 67.6
C02p10030 Brassica napus HOM05D001685 ORTHO05D007488 1.9e-37 159.1 108 67.6
BolC2t06905H Brassica oleracea HOM05D001685 ORTHO05D007488 1.9e-37 159.1 108 67.6
Thhalv10012865m.g Eutrema salsugineum HOM05D001685 ORTHO05D007488 1.9e-37 159.1 108 66.7
BcaB05g23340 Brassica carinata HOM05D001685 ORTHO05D007488 2.5e-37 158.7 108 67.6
CsaV3_3G014310 Cucumis sativus L. HOM05D001685 ORTHO05D007488 2.5e-37 158.7 106 68.9
Sp6g25760 Schrenkiella parvula HOM05D001685 ORTHO05D007488 2.5e-37 158.7 108 67.6
Solyc01g067530.3 Solanum lycopersicum HOM05D001685 ORTHO05D007488 2.5e-37 158.7 94 74.5
Sopen01g029480 Solanum pennellii HOM05D001685 ORTHO05D007488 2.5e-37 158.7 94 74.5
Psat1g189920 Pisum sativum HOM05D001685 ORTHO05D007488 5.7e-37 157.5 106 68.9
A02p05000 Brassica napus HOM05D001685 ORTHO05D007488 9.7e-37 156.8 108 66.7
BraA02t05459Z Brassica rapa HOM05D001685 ORTHO05D007488 9.7e-37 156.8 108 66.7
Migut.G00277 Erythranthe guttata HOM05D001685 ORTHO05D007488 1.3e-36 156.4 102 69.6
TPR.G35520 Trifolium pratense HOM05D001685 ORTHO05D007488 1.3e-36 156.4 107 65.4
Aa31LG11G11050 Aethionema arabicum HOM05D001685 ORTHO05D007488 1.6e-36 156.0 105 68.6
AUR62042645 Chenopodium quinoa HOM05D001685 ORTHO05D007488 1.6e-36 156.0 107 62.6
Lj3C814G4 Lonicera japonica HOM05D001685 ORTHO05D007488 1.6e-36 156.0 107 69.2
CSS0001180 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 2.2e-36 155.6 118 61.9
ATR0706G022 Amborella trichopoda HOM05D001685 ORTHO05D007488 3.7e-36 154.8 109 66.1
Aqoxy1G01559 Aquilegia oxysepala HOM05D001685 ORTHO05D007488 3.7e-36 154.8 108 64.8
SGA_v2.0_scaffold86G26925 Striga asiatica HOM05D001685 ORTHO05D007488 1.1e-35 153.3 103 65.0
Ca_00557_v3 Cicer arietinum L. HOM05D001685 ORTHO05D007488 1.4e-35 152.9 107 65.4
CDE01G0502 Ceratophyllum demersum HOM05D001685 ORTHO05D007488 2.4e-35 152.1 104 65.4
Zm00001eb111050 Zea mays HOM05D001685 ORTHO05D007488 5.3e-35 151.0 106 60.4
FAN12G0539 Fragaria x ananassa HOM05D001685 ORTHO05D007488 6.9e-35 150.6 126 57.9
Os07g0669250 Oryza sativa ssp. japonica HOM05D001685 ORTHO05D007488 7.6e-34 147.1 106 57.5
vmacro08110 Vaccinium macrocarpon HOM05D001685 ORTHO05D007488 5.0e-33 144.4 80 81.2
PGR004G0738 Punica granatum HOM05D001685 ORTHO05D007488 8.5e-33 143.7 88 70.5
SalBow2G3264 Salvia bowleyana HOM05D001685 ORTHO05D007488 2.5e-32 142.1 124 55.6
Dinv44406 Davidia involucrata HOM05D001685 ORTHO05D007488 3.2e-32 141.7 78 82.1
HPP92_001325 Vanilla planifolia HOM05D001685 ORTHO05D007488 9.3e-32 140.2 103 57.3
Gohir.A10G162200 Gossypium hirsutum HOM05D001685 ORTHO05D007488 7.9e-31 137.1 80 76.2
SEGI_37784 Sequoiadendron giganteum HOM05D001685 ORTHO05D007488 7.9e-31 137.1 104 59.6
Nn3g21379 Nelumbo nucifera HOM05D001685 ORTHO05D007488 1.5e-29 132.9 77 79.2
Pp3c7_19740 Physcomitrium patens HOM05D001685 ORTHO05D007488 9.4e-24 113.6 104 52.9
Glyma.15G095700 Glycine max HOM05D001685 ORTHO05D007488 1.2e-23 113.2 107 55.1
AagrBONN_evm.TU.Sc2ySwM_368.2660 Anthoceros agrestis HOM05D001685 ORTHO05D007488 1.0e-22 110.2 82 57.3
Mapoly0136s0003 Marchantia polymorpha HOM05D001685 ORTHO05D007488 1.5e-21 106.3 85 54.1
TPR.G15972 Trifolium pratense HOM05D001685 ORTHO05D007488 8.2e-20 100.5 68 66.2
SMO202G0004 Selaginella moellendorffii HOM05D001685 ORTHO05D007488 1.4e-19 99.8 91 48.4
SMO169G0319 Selaginella moellendorffii HOM05D001685 ORTHO05D007488 4.1e-19 98.2 78 53.8
SMO202G0080 Selaginella moellendorffii HOM05D001685 ORTHO05D007488 1.2e-18 96.7 91 47.3
CSS0000537 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 4.5e-18 94.7 112 44.6
MBI19_g36823_MAGBIO Magnolia biondii HOM05D001685 ORTHO05D007488 1.7e-17 92.8 79 58.2
CSS0033849 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 6.5e-17 90.9 61 63.9
CSS0034079 Camellia sinensis var. sinensis HOM05D001685 ORTHO05D007488 6.5e-17 90.9 61 63.9
HanXRQChr03g0079761 Helianthus annuus HOM05D001685 ORTHO05D007488 1.6e-15 86.3 40 95.0
Cre10.g433100 Chlamydomonas reinhardtii HOM05D001685 ORTHO05D007488 3.3e-13 78.6 67 47.8
PRCOL_00003567 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 3.3e-13 78.6 75 46.7
Sc13g0003540 Simmondsia chinensis HOM05D001685 ORTHO05D007488 1.7e-12 76.3 43 72.1
MCO11G224 Micromonas commoda HOM05D001685 ORTHO05D007488 1.2e-10 70.1 73 42.5
CBR_g24048 Chara braunii HOM05D001685 ORTHO05D007488 6.7e-06 54.3 62 41.9


User provided reference genes

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