Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.1e-155 553.1 265 100.0
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.5e-131 473.0 257 89.1
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.6e-125 453.0 253 86.6
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 3.9e-87 325.5 259 59.8
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 8.0e-85 317.8 252 61.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.4e-81 307.0 256 55.9
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 9.2e-81 304.3 252 57.5
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 4.6e-80 302.0 252 57.9
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 3.0e-79 299.3 255 58.4
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 4.3e-78 295.4 232 61.2
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 7.3e-78 294.7 252 59.1
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.6e-77 293.5 249 58.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.8e-76 290.0 253 57.3
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 4.0e-76 288.9 252 56.3
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.0e-75 286.6 253 56.9
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 5.8e-75 285.0 254 56.7
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 3.7e-74 282.3 253 55.7
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 8.3e-74 281.2 252 54.0
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.4e-73 280.4 251 56.6
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 2.4e-73 279.6 252 56.7
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 3.2e-73 279.3 253 55.7
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.2e-72 277.3 253 54.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.0e-71 274.2 256 54.7
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.7e-71 273.5 256 54.7
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.0e-71 272.7 249 49.4
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 3.9e-71 272.3 253 52.6
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 1.5e-70 270.4 244 52.9
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.5e-70 269.6 248 53.6
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.5e-70 269.6 255 54.9
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.3e-70 269.2 241 56.8
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.3e-70 268.9 251 53.4
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.6e-69 266.9 253 53.4
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 6.2e-69 265.0 224 58.5
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 8.1e-69 264.6 240 55.0
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 8.1e-69 264.6 247 53.4
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.4e-68 263.8 251 53.8
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.3e-68 263.1 240 53.3
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 3.4e-67 259.2 251 52.6
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 4.4e-67 258.8 247 52.6
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 2.9e-66 256.1 244 52.0
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 6.4e-66 255.0 256 50.4
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 1.4e-65 253.8 257 49.4
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 5.4e-65 251.9 252 50.0
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.0e-63 247.7 256 50.4
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 6.6e-63 245.0 253 48.6
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.9e-62 243.4 255 48.2
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.5e-62 243.0 249 50.2
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 2.5e-62 243.0 250 48.4
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 4.3e-62 242.3 248 50.0
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 7.3e-62 241.5 250 48.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 1.4e-60 237.3 252 49.2
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.4e-60 237.3 249 50.2
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.8e-60 236.9 251 49.0
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 6.8e-60 235.0 248 46.0
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.2e-59 234.2 231 49.8
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.2e-59 234.2 252 45.6
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 3.4e-59 232.6 252 46.8
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 4.4e-59 232.3 255 47.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 5.8e-59 231.9 250 44.8
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 7.6e-59 231.5 248 45.2
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 2.9e-58 229.6 252 46.0
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 3.8e-58 229.2 243 45.3
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 8.4e-58 228.0 234 50.0
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.1e-56 223.4 248 46.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.7e-56 223.0 234 47.4
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 2.7e-56 223.0 251 44.6
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 3.5e-56 222.6 252 46.0
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 1.3e-55 220.7 252 45.2
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.0e-55 219.5 251 45.4
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 5.1e-55 218.8 174 58.0
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 8.7e-55 218.0 245 46.1
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.3e-54 216.1 237 48.5
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.3e-54 216.1 237 48.5
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.6e-54 215.3 238 47.9
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 7.3e-54 214.9 236 48.3
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 9.6e-54 214.5 243 46.9
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 1.6e-53 213.8 239 45.6
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 3.6e-53 212.6 237 48.1
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 3.6e-53 212.6 238 47.1
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 6.2e-53 211.8 237 47.3
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 6.2e-53 211.8 237 47.3
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 8.1e-53 211.5 236 47.5
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 8.1e-53 211.5 165 61.2
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 8.1e-53 211.5 170 61.2
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.3e-52 208.8 238 47.1
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 4.4e-51 205.7 234 48.3
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 7.6e-51 204.9 238 45.8
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 3.8e-50 202.6 238 44.5
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.2e-48 197.6 249 44.2
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 3.5e-48 196.1 157 61.8
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 5.1e-47 192.2 247 42.5
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 5.1e-47 192.2 172 55.2
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 1.6e-45 187.2 172 54.7
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.4e-44 184.1 303 35.3
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 1.4e-44 184.1 236 39.8
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 2.4e-44 183.3 235 45.5
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 2.6e-43 179.9 303 36.0
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 7.6e-43 178.3 235 40.0
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.2e-41 172.6 242 41.7
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.6e-40 169.1 161 47.8
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 5.1e-39 165.6 256 35.9
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.6e-38 162.2 237 38.0
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 1.9e-33 147.1 234 37.6
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 3.0e-31 139.8 149 49.7
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 3.9e-31 139.4 149 49.7
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 4.3e-30 136.0 149 47.0
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 1.0e-26 124.8 146 45.2
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 8.4e-26 121.7 101 58.4
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 2.7e-24 116.7 88 61.4
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.1e-22 111.3 88 58.0
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 5.7e-22 109.0 108 44.4
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 1.3e-21 107.8 340 25.6
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 2.2e-21 107.1 113 47.8
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 5.3e-20 102.4 157 43.3
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 7.7e-19 98.6 67 70.1
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 6.5e-18 95.5 113 47.8
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 1.4e-17 94.4 83 48.2
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 5.5e-17 92.4 146 37.0
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 1.2e-16 91.3 80 48.8
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.7e-16 90.1 63 63.5
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 1.4e-12 77.8 59 61.0


User provided reference genes

Program Settings