Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 3.0e-131 471.9 242 100.0
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 2.5e-64 249.6 172 75.0
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 2.3e-62 243.0 202 66.3
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 4.5e-58 228.8 206 59.7
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 2.2e-57 226.5 164 64.6
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 7.2e-56 221.5 187 57.2
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 1.6e-55 220.3 175 61.1
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 1.6e-55 220.3 164 62.2
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 1.8e-54 216.9 158 67.1
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 3.9e-54 215.7 155 67.1
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 5.1e-54 215.3 151 70.2
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 6.7e-54 214.9 164 64.6
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 8.7e-54 214.5 164 64.0
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.1e-53 214.2 158 64.6
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.9e-53 213.4 171 63.7
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.5e-53 213.0 193 58.0
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 1.6e-52 210.3 207 56.5
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 2.2e-52 209.9 172 63.4
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 2.2e-52 209.9 150 68.0
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 3.7e-52 209.1 193 56.5
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 4.8e-52 208.8 153 63.4
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 4.8e-52 208.8 151 66.9
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 6.3e-52 208.4 151 65.6
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 1.4e-51 207.2 184 57.1
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 1.8e-51 206.8 175 62.3
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 2.4e-51 206.5 151 64.9
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 4.1e-51 205.7 194 57.2
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 5.3e-51 205.3 177 59.3
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 6.9e-51 204.9 172 61.6
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 6.9e-51 204.9 185 58.9
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 9.0e-51 204.5 186 58.6
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 9.0e-51 204.5 172 64.0
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.5e-50 203.8 192 55.2
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 2.0e-50 203.4 190 53.7
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 2.0e-50 203.4 176 60.2
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 2.0e-50 203.4 173 59.0
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 3.4e-50 202.6 195 56.9
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 4.5e-50 202.2 177 57.6
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 4.5e-50 202.2 232 49.6
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 5.9e-50 201.8 150 62.7
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 7.7e-50 201.4 173 59.0
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.0e-49 201.1 173 61.8
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 1.3e-49 200.7 185 55.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.3e-49 200.7 150 64.0
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-49 200.3 171 57.9
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 2.9e-49 199.5 152 65.1
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 2.9e-49 199.5 156 64.7
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 5.0e-49 198.7 195 55.9
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 5.0e-49 198.7 156 64.1
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 6.5e-49 198.4 199 54.8
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 6.5e-49 198.4 150 65.3
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 1.1e-48 197.6 189 57.1
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 1.1e-48 197.6 179 56.4
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 1.1e-48 197.6 155 63.9
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 1.4e-48 197.2 198 53.0
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 1.9e-48 196.8 158 63.3
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 3.2e-48 196.1 173 60.7
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 3.2e-48 196.1 162 59.3
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 3.2e-48 196.1 162 59.3
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 3.2e-48 196.1 162 59.3
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 4.2e-48 195.7 176 58.0
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 4.2e-48 195.7 198 52.5
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 5.5e-48 195.3 155 61.9
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 5.5e-48 195.3 185 57.3
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 5.5e-48 195.3 151 63.6
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.6e-47 193.7 172 59.3
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 1.6e-47 193.7 161 59.6
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 3.6e-47 192.6 144 66.0
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 4.6e-47 192.2 147 61.9
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 4.6e-47 192.2 159 61.0
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 6.1e-47 191.8 167 58.1
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 6.1e-47 191.8 190 53.7
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 7.9e-47 191.4 151 63.6
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 1.8e-46 190.3 142 65.5
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 1.8e-46 190.3 264 42.0
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 3.9e-46 189.1 218 50.0
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 3.9e-46 189.1 151 62.9
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 3.9e-46 189.1 189 54.0
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 8.8e-46 188.0 154 61.0
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.1e-45 187.6 150 62.7
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.1e-45 187.6 150 58.7
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.0e-45 186.8 186 52.7
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 3.3e-45 186.0 159 64.8
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 5.7e-45 185.3 183 53.6
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 9.7e-45 184.5 194 51.5
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.7e-44 183.7 145 61.4
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 2.2e-44 183.3 191 53.9
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 8.2e-44 181.4 191 51.8
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 5.3e-43 178.7 166 57.8
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 6.9e-43 178.3 186 53.8
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 9.1e-43 177.9 138 63.8
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.6e-42 176.4 128 65.6
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 4.5e-42 175.6 196 50.0
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.1e-40 171.0 164 56.1
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 1.1e-40 171.0 156 57.1
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 7.2e-40 168.3 133 62.4
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 1.6e-39 167.2 176 52.3
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.4e-38 164.1 167 53.3
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 8.8e-38 161.4 116 69.8
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 2.0e-37 160.2 137 61.3
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.3e-36 157.5 156 50.6
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.2e-34 151.0 202 44.1
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 2.0e-34 150.2 122 63.9
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 2.6e-34 149.8 138 54.3
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 5.9e-34 148.7 197 47.2
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 2.2e-33 146.7 89 85.4
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 2.9e-33 146.4 196 46.9
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 1.5e-32 144.1 120 60.8
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 5.5e-32 142.1 144 52.8
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 1.2e-31 141.0 163 50.9
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 1.6e-31 140.6 152 48.7
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.7e-31 139.8 160 46.2
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 8.8e-30 134.8 116 62.1
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 9.7e-29 131.3 166 49.4
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 9.7e-29 131.3 166 49.4
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.7e-28 130.6 104 63.5
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 4.8e-28 129.0 146 48.6
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 2.0e-26 123.6 144 50.0
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 7.7e-26 121.7 112 56.2
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 1.0e-25 121.3 85 68.2
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 2.2e-25 120.2 111 51.4
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 1.9e-24 117.1 181 38.1
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 2.1e-23 113.6 127 48.0
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 2.1e-23 113.6 160 41.2
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 1.4e-19 100.9 104 51.0
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 2.0e-18 97.1 68 64.7
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 1.9e-16 90.5 73 61.6
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 5.7e-13 79.0 63 61.9
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.3e-12 77.8 96 49.0
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 2.7e-10 70.1 178 31.5
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-09 66.6 170 30.6
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 3.3e-08 63.2 78 46.2
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 7.3e-08 62.0 41 61.0
MCO02G048 Micromonas commoda HOM05D005768 ORTHO05D007100 1.0e-06 58.2 190 27.9


User provided reference genes

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