Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 2.6e-203 711.8 363 100.0
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 2.0e-126 456.4 276 85.5
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 2.1e-107 393.3 288 72.2
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.5e-105 387.1 286 71.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 4.4e-102 375.6 285 69.1
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 7.6e-102 374.8 338 61.8
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.3e-101 374.0 284 70.4
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.9e-101 372.9 286 70.3
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.4e-100 369.8 277 71.5
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 7.1e-100 368.2 335 61.8
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.6e-99 367.1 333 61.9
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 2.1e-99 366.7 286 66.8
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.0e-98 364.4 288 67.7
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 1.3e-98 364.0 274 70.8
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.3e-98 363.2 336 61.9
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 5.1e-98 362.1 316 63.9
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 6.6e-98 361.7 290 66.2
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.6e-98 361.7 344 58.4
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.9e-97 360.1 274 70.1
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 9.6e-97 357.8 336 61.3
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 9.6e-97 357.8 354 57.9
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.6e-96 357.1 335 60.3
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 3.6e-96 355.9 346 56.6
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 4.8e-96 355.5 289 65.4
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 6.2e-96 355.1 280 66.8
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 6.2e-96 355.1 279 67.0
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.4e-95 354.0 351 57.0
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.8e-95 353.6 346 57.5
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.8e-95 353.6 285 64.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 3.1e-95 352.8 351 57.3
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 4.0e-95 352.4 287 63.8
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 5.3e-95 352.1 349 56.2
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 9.0e-95 351.3 345 57.4
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.2e-94 350.9 291 62.2
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.2e-94 350.9 279 64.5
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.6e-94 349.7 286 64.7
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 3.4e-94 349.4 272 63.6
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 5.8e-94 348.6 349 55.9
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 7.6e-94 348.2 349 55.9
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 9.9e-94 347.8 333 57.4
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 9.9e-94 347.8 345 55.7
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.9e-93 346.3 349 54.4
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.9e-93 346.3 349 54.4
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 2.9e-93 346.3 286 64.0
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 2.9e-93 346.3 289 63.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 6.4e-93 345.1 346 57.2
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 8.4e-93 344.7 330 59.1
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 1.9e-92 343.6 331 57.1
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.4e-92 343.2 294 60.9
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.2e-92 342.8 343 59.2
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 3.2e-92 342.8 344 55.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 7.1e-92 341.7 343 56.3
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 7.1e-92 341.7 291 61.5
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 9.3e-92 341.3 339 56.9
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 1.6e-91 340.5 340 55.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 2.1e-91 340.1 345 56.8
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 2.7e-91 339.7 291 63.2
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 6.0e-91 338.6 348 54.6
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 3.9e-90 335.9 322 57.8
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 5.1e-90 335.5 349 53.0
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 2.5e-89 333.2 276 64.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 3.3e-89 332.8 290 61.0
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 5.6e-89 332.0 351 53.8
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.1e-88 330.1 343 54.2
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 2.8e-88 329.7 359 50.4
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 8.1e-88 328.2 317 58.4
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 2.0e-86 323.6 277 62.8
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 2.0e-86 323.6 286 57.0
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 2.0e-86 323.6 277 61.7
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 9.9e-86 321.2 275 61.8
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.7e-85 320.5 280 59.3
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 2.9e-85 319.7 304 57.6
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 6.4e-85 318.5 339 53.7
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 2.4e-84 316.6 278 61.5
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 2.4e-84 316.6 334 55.4
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 7.9e-83 311.6 277 59.9
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 3.9e-82 309.3 278 60.8
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 5.1e-82 308.9 278 60.4
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.1e-81 307.8 279 59.9
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.1e-81 307.8 279 59.9
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.1e-81 307.8 288 60.1
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.5e-81 307.4 279 60.2
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 4.3e-81 305.8 276 58.3
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.3e-80 304.3 323 52.6
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 2.1e-75 287.0 319 51.7
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.8e-74 283.9 276 57.6
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 2.3e-74 283.5 303 51.5
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 1.1e-73 281.2 278 56.5
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.5e-65 254.2 210 63.8
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 2.2e-61 240.4 282 49.6
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 7.2e-60 235.3 285 46.0
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 1.4e-52 211.1 274 40.9
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 4.4e-49 199.5 186 54.8
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 5.3e-47 192.6 133 72.2
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 1.8e-42 177.6 219 47.9
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.3e-42 177.2 121 70.2
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 5.2e-34 149.4 266 36.1
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.8e-31 141.0 265 34.0
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.2e-30 138.3 247 41.7
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.3e-28 130.2 221 42.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 4.2e-28 129.8 120 57.5
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-23 113.6 137 45.3
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.3e-21 107.5 256 29.7
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.5e-20 104.8 130 46.9
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 2.7e-14 84.0 279 28.0
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 3.3e-12 77.0 338 25.4
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 4.3e-12 76.6 80 46.2


User provided reference genes

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