Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 1.4e-226 789.3 390 100.0
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 1.5e-167 593.2 385 75.6
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 2.7e-161 572.4 391 73.7
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 1.6e-129 466.8 406 61.1
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.6e-129 466.8 390 59.5
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.7e-128 463.4 389 59.4
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 6.6e-128 461.5 389 59.4
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 6.6e-128 461.5 389 59.9
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 1.9e-127 459.9 391 60.6
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.9e-127 459.9 392 59.7
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 4.3e-127 458.8 390 60.3
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 5.6e-127 458.4 389 58.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.6e-126 456.8 388 58.2
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 1.4e-125 453.8 385 57.9
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 3.1e-125 452.6 389 59.6
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 8.9e-125 451.1 392 58.2
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 1.2e-124 450.7 394 58.1
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.2e-124 450.7 389 57.8
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 4.4e-124 448.7 387 57.6
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 7.6e-124 448.0 389 56.8
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 9.9e-124 447.6 390 57.4
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 1.3e-123 447.2 391 59.6
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 2.2e-123 446.4 389 58.4
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 2.9e-123 446.0 389 57.8
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 6.4e-123 444.9 387 56.6
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.9e-122 443.4 389 57.8
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 3.2e-122 442.6 390 57.4
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 9.3e-122 441.0 393 59.3
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 9.3e-122 441.0 390 56.7
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 2.7e-121 439.5 389 57.3
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 2.7e-121 439.5 393 59.3
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.5e-121 439.1 389 56.6
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 6.0e-121 438.3 389 56.6
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.3e-120 437.2 389 57.3
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 1.5e-119 433.7 389 55.3
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 2.8e-118 429.5 401 55.9
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.1e-117 427.6 389 56.6
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 2.4e-117 426.4 387 55.0
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 4.0e-117 425.6 389 54.8
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 5.3e-117 425.2 392 54.1
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 9.0e-117 424.5 389 55.5
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 1.5e-116 423.7 389 55.0
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 3.4e-116 422.5 395 53.2
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 9.9e-116 421.0 390 53.6
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.7e-115 420.2 384 54.7
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 2.9e-115 419.5 399 53.4
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 5.4e-114 415.2 365 58.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 4.6e-113 412.1 393 53.4
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 6.0e-113 411.8 391 53.5
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 6.0e-113 411.8 389 53.5
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 3.0e-112 409.5 386 55.4
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.1e-111 407.5 392 51.8
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 1.5e-111 407.1 328 59.5
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 2.5e-111 406.4 352 55.7
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.3e-111 406.0 389 52.7
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 5.6e-111 405.2 350 59.7
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 7.3e-111 404.8 396 51.5
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 1.3e-110 404.1 389 51.9
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 8.1e-110 401.4 392 51.8
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 1.1e-109 401.0 390 52.6
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 7.6e-108 394.8 389 51.9
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 7.6e-108 394.8 395 51.1
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 2.9e-107 392.9 391 50.1
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 4.9e-107 392.1 392 51.0
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 6.4e-107 391.7 395 51.1
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.4e-106 390.6 384 51.0
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.9e-106 390.2 391 49.9
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 3.2e-106 389.4 386 52.3
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 4.2e-106 389.0 388 49.7
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 1.2e-105 387.5 389 52.2
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 4.6e-105 385.6 415 49.6
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 3.0e-104 382.9 396 48.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 8.7e-104 381.3 390 51.3
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 5.6e-103 378.6 322 60.6
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.4e-101 374.0 329 55.3
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 2.4e-101 373.2 392 49.2
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.9e-98 363.6 393 46.3
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 6.7e-96 355.1 318 55.0
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.3e-94 350.9 350 49.7
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 1.4e-93 347.4 348 50.6
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.5e-92 344.0 389 48.3
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 5.0e-91 339.0 390 47.7
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 2.3e-88 330.1 308 51.0
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 3.1e-85 319.7 279 58.1
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 4.5e-84 315.8 286 53.1
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 7.7e-84 315.1 287 55.4
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 8.5e-83 311.6 267 58.1
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 3.2e-82 309.7 301 51.8
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.7e-81 306.6 322 51.6
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 6.1e-81 305.4 311 48.9
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 4.1e-77 292.7 412 41.5
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 3.6e-73 279.6 397 41.8
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 3.7e-70 269.6 242 54.5
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 4.8e-70 269.2 268 50.4
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.4e-56 224.6 234 51.7
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 8.3e-54 215.3 231 53.2
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 7.0e-53 212.2 213 47.4
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.0e-48 198.4 284 40.5
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 5.7e-47 192.6 237 43.0
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.7e-44 183.7 391 34.0
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 2.9e-43 180.3 200 43.0
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.1e-37 161.8 344 32.6
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 7.0e-37 159.1 277 34.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 6.8e-32 142.5 235 38.7
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 2.8e-25 120.6 103 63.1
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 8.3e-22 109.0 132 42.4
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 7.1e-21 105.9 90 55.6
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 2.2e-14 84.3 101 41.6
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 6.0e-12 76.3 104 41.3
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 4.7e-09 66.6 96 38.5
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 8.9e-08 62.4 50 56.0


User provided reference genes

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