Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 7.2e-98 360.5 177 100.0
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.2e-71 273.5 171 74.9
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.7e-70 269.6 172 78.5
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.5e-50 202.6 157 66.9
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 2.8e-49 199.1 152 65.1
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.8e-48 196.4 148 66.9
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 3.1e-48 195.7 170 60.6
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.2e-47 193.7 166 58.4
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.6e-47 192.6 154 64.9
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 3.4e-47 192.2 166 60.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 3.4e-47 192.2 166 60.2
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 4.4e-47 191.8 166 59.0
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.7e-46 189.9 157 59.9
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 4.9e-46 188.3 144 62.5
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 8.4e-46 187.6 144 63.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.1e-45 187.2 147 64.6
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.9e-45 186.4 161 58.4
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 2.4e-45 186.0 144 63.2
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.2e-45 185.7 166 58.4
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.2e-45 185.7 147 63.9
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 5.4e-45 184.9 169 59.2
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 9.3e-45 184.1 150 61.3
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 9.3e-45 184.1 156 62.8
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.2e-44 183.7 146 61.0
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 2.1e-44 183.0 150 60.7
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.7e-44 182.6 150 60.7
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.5e-44 182.2 165 58.2
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 3.5e-44 182.2 153 60.1
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 3.5e-44 182.2 162 58.6
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 6.0e-44 181.4 149 58.4
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.0e-43 180.6 147 62.6
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.0e-43 180.6 145 60.7
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.3e-43 180.3 162 55.6
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-43 180.3 161 56.5
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-43 180.3 161 56.5
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.3e-43 180.3 161 56.5
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 1.7e-43 179.9 162 57.4
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.3e-43 179.5 148 60.1
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.0e-43 179.1 163 57.7
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 3.0e-43 179.1 148 60.8
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 3.0e-43 179.1 147 57.1
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 3.9e-43 178.7 146 61.6
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 3.9e-43 178.7 148 60.8
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 5.1e-43 178.3 167 56.9
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 6.6e-43 177.9 154 56.5
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 8.7e-43 177.6 153 59.5
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.1e-42 177.2 159 55.3
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.9e-42 176.4 163 57.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 4.3e-42 175.3 131 66.4
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 4.3e-42 175.3 149 57.7
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 7.3e-42 174.5 159 57.9
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 1.6e-41 173.3 163 57.1
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 2.1e-41 172.9 151 56.3
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.8e-41 172.6 151 56.3
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 4.8e-41 171.8 178 53.4
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 8.1e-41 171.0 158 57.6
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 5.3e-40 168.3 157 57.3
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 5.3e-40 168.3 156 57.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 9.0e-40 167.5 140 57.9
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.0e-39 166.4 131 61.1
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.4e-39 165.6 130 62.3
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 3.4e-39 165.6 152 55.3
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 3.4e-39 165.6 152 53.9
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 3.4e-39 165.6 152 53.9
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 9.9e-39 164.1 162 53.7
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 2.9e-38 162.5 129 62.8
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 2.9e-38 162.5 134 56.7
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 2.4e-37 159.5 233 41.2
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 1.6e-36 156.8 149 52.3
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 1.0e-35 154.1 143 52.4
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 1.7e-35 153.3 133 57.9
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 5.1e-35 151.8 159 49.7
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.1e-34 150.6 137 55.5
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 4.3e-34 148.7 135 55.6
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.6e-34 148.3 144 53.5
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.3e-33 147.1 137 54.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 2.8e-33 146.0 171 48.5
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 3.6e-33 145.6 129 55.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 3.6e-33 145.6 138 55.8
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 4.8e-33 145.2 137 54.0
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 6.2e-33 144.8 215 40.5
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 2.0e-31 139.8 101 62.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.6e-31 139.4 129 54.3
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 2.6e-31 139.4 144 51.4
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 1.3e-30 137.1 149 52.3
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 2.2e-30 136.3 129 53.5
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 6.4e-30 134.8 147 47.6
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 7.1e-29 131.3 99 59.6
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.3e-29 131.0 142 48.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 3.5e-28 129.0 149 48.3
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 1.7e-22 110.2 82 61.0
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 2.2e-22 109.8 83 54.2
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.1e-21 107.5 153 46.4
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.5e-21 105.1 99 55.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.8e-19 100.1 143 40.6
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.8e-19 100.1 138 40.6
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 2.3e-19 99.8 88 63.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.1e-19 98.6 77 68.8
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 8.7e-19 97.8 88 62.5
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.5e-18 97.1 79 55.7
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 1.9e-18 96.7 72 61.1
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 3.3e-18 95.9 147 36.7
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 7.4e-18 94.7 95 54.7
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 9.6e-18 94.4 73 57.5
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.4e-15 85.9 106 44.3
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 5.8e-15 85.1 73 61.6
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.1e-12 75.1 72 59.7
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 2.0e-07 60.1 77 42.9
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 4.5e-07 58.9 180 24.4
Cre02.g104000 Chlamydomonas reinhardtii HOM05D007186 ORTHO05D008970 1.7e-06 57.0 119 31.9
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 2.9e-06 56.2 41 70.7


User provided reference genes

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