Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 0.0e+00 1162.9 597 100.0
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 1.4e-174 617.1 675 56.0
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 1.9e-121 440.7 642 49.2
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 6.5e-66 256.1 659 34.6
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 1.4e-57 228.4 469 37.7
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 3.6e-56 223.8 463 38.0
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 3.0e-55 220.7 656 33.5
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 6.7e-55 219.5 460 38.9
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 5.7e-54 216.5 458 40.2
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 2.8e-53 214.2 688 31.5
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 1.8e-52 211.5 462 35.9
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 2.4e-52 211.1 429 36.8
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 2.4e-52 211.1 499 37.1
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 6.9e-52 209.5 452 37.6
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 2.0e-51 208.0 678 31.7
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 1.3e-50 205.3 530 36.8
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 3.8e-50 203.8 535 33.6
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 7.2e-49 199.5 727 31.6
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 2.2e-45 188.0 437 37.1
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 3.7e-45 187.2 444 34.2
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 1.1e-44 185.7 513 33.5
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 3.1e-44 184.1 466 34.5
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 7.0e-44 183.0 634 31.9
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 1.5e-43 181.8 456 35.5
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 3.5e-43 180.6 396 35.4
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 2.2e-42 177.9 442 36.4
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 2.2e-42 177.9 500 33.8
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 2.9e-42 177.6 455 32.3
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 3.8e-42 177.2 397 35.5
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 8.5e-42 176.0 501 32.1
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.1e-41 175.6 538 32.2
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 1.4e-41 175.3 488 33.2
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 1.4e-41 175.3 442 33.3
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 2.5e-41 174.5 372 35.8
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 4.2e-41 173.7 397 35.0
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 2.1e-40 171.4 406 35.5
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 8.0e-40 169.5 479 33.6
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 2.3e-39 167.9 559 31.5
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.3e-39 167.9 639 28.6
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.6e-38 164.5 532 32.5
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 3.3e-38 164.1 521 30.7
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 5.7e-38 163.3 544 30.1
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.7e-38 162.5 453 33.3
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 9.7e-38 162.5 512 32.2
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 2.8e-37 161.0 459 33.6
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 8.2e-37 159.5 401 34.2
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 7.0e-36 156.4 511 31.3
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 9.1e-36 156.0 559 29.7
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 1.2e-35 155.6 370 35.9
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 3.5e-35 154.1 503 30.8
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 5.9e-35 153.3 640 27.7
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 1.7e-34 151.8 511 30.7
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 2.2e-34 151.4 516 30.2
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 2.9e-34 151.0 450 32.2
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 3.8e-34 150.6 401 35.4
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 5.0e-34 150.2 666 27.9
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 6.5e-34 149.8 659 28.1
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 4.2e-33 147.1 538 30.5
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 4.2e-33 147.1 666 27.6
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 7.2e-33 146.4 508 30.9
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 7.2e-33 146.4 452 31.6
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.1e-32 144.8 613 29.0
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 8.0e-32 142.9 540 30.6
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 1.0e-31 142.5 451 31.0
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 1.8e-31 141.7 569 29.0
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.0e-31 141.0 540 30.2
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 5.2e-31 140.2 540 30.2
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 6.7e-31 139.8 384 32.8
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 2.0e-30 138.3 571 28.5
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 2.0e-30 138.3 671 24.9
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 1.3e-29 135.6 498 29.9
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 2.2e-29 134.8 380 33.4
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 8.3e-29 132.9 430 30.2
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 7.0e-28 129.8 481 31.4
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.3e-26 125.6 454 30.4
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 1.7e-26 125.2 472 30.1
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 2.2e-26 124.8 400 29.8
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 2.5e-25 121.3 395 31.4
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 4.2e-25 120.6 334 34.1
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 4.2e-25 120.6 394 29.9
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.0e-23 115.9 616 27.4
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 1.8e-23 115.2 402 30.3
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 2.0e-22 111.7 332 32.2
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 9.8e-22 109.4 350 29.7
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 1.7e-21 108.6 324 32.1
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 1.7e-21 108.6 319 30.7
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 4.8e-21 107.1 317 30.6
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 6.3e-21 106.7 472 28.2
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 1.4e-20 105.5 321 29.6
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 1.8e-20 105.1 461 28.4
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 5.4e-20 103.6 316 33.2
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 2.0e-19 101.7 325 30.2
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 2.0e-19 101.7 325 30.2
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 2.0e-19 101.7 325 30.2
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 2.0e-19 101.7 531 27.9
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 2.7e-19 101.3 317 29.7
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 2.7e-19 101.3 322 28.9
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 4.5e-19 100.5 330 30.6
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 5.9e-19 100.1 332 30.1
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 1.7e-18 98.6 321 30.2
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 2.3e-18 98.2 323 30.0
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 2.9e-18 97.8 319 30.1
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 2.9e-18 97.8 473 25.4
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 6.6e-18 96.7 225 32.9
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 1.1e-17 95.9 219 35.2
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 5.5e-17 93.6 320 31.6
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 5.5e-17 93.6 320 31.6
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 7.2e-17 93.2 319 31.0
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 7.2e-17 93.2 319 31.0
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 9.5e-17 92.8 318 30.8
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 4.7e-16 90.5 422 27.5
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.4e-15 89.0 235 33.6
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 6.8e-15 86.7 222 33.8
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 2.6e-14 84.7 211 29.4
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 1.4e-12 79.0 306 29.1
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 7.0e-12 76.6 332 28.9
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 2.0e-11 75.1 390 24.4
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 5.9e-11 73.6 91 44.0
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 1.0e-10 72.8 339 27.4
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 3.9e-10 70.9 140 40.0
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 3.9e-10 70.9 176 35.2
BcaC02g07919 Brassica carinata HOM05D008776 ORTHO05D005587 3.3e-09 67.8 80 43.8
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.2e-08 65.9 288 26.0
HPP92_020281 Vanilla planifolia HOM05D007001 ORTHO05D005587 1.6e-08 65.5 93 41.9
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 1.0e-07 62.8 189 34.4
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 3.1e-07 61.2 363 25.9


User provided reference genes

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