Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0074181 Helianthus annuus HOM05D012567 ORTHO05D004696 2.3e-123 445.7 239 100.0
HanXRQChr03g0074171 Helianthus annuus HOM05D012567 ORTHO05D004696 3.1e-104 382.1 238 88.2
HanXRQChr03g0074111 Helianthus annuus HOM05D012567 ORTHO05D004696 2.6e-103 379.0 238 87.0
HanXRQChr03g0074151 Helianthus annuus HOM05D012567 ORTHO05D004696 1.0e-102 377.1 238 86.6
Lsat_1_v5_gn_7_52661 Lactuca sativa HOM05D012567 ORTHO05D004696 1.0e-70 270.8 238 63.9
Lsat_1_v5_gn_7_52621 Lactuca sativa HOM05D012567 ORTHO05D004696 2.8e-68 262.7 238 62.2
Lsat_1_v5_gn_7_52640 Lactuca sativa HOM05D012567 ORTHO05D004696 3.1e-67 259.2 238 62.6
HanXRQChr09g0244301 Helianthus annuus HOM05D012567 ORTHO05D004696 3.7e-65 252.3 239 61.1
Lsat_1_v5_gn_7_52601 Lactuca sativa HOM05D012567 ORTHO05D004696 2.9e-49 199.5 238 48.3
HanXRQChr06g0167601 Helianthus annuus HOM05D012567 ORTHO05D004696 4.6e-47 192.2 232 52.2
ECA240G1251 Erigeron canadensis HOM05D012567 ORTHO05D004696 6.2e-44 181.8 167 58.1
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 4.5e-34 149.1 232 37.5
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 1.4e-32 144.1 232 36.2
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.0e-22 109.8 232 35.8
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.8e-20 103.2 241 29.9
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.4e-18 96.3 240 27.9
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 4.5e-18 95.9 229 30.6
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.3e-17 94.4 229 27.5
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 4.9e-17 92.4 229 30.6
Cc06_g13850 Coffea canephora HOM05D012567 ORTHO05D004696 1.4e-16 90.9 216 30.1
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 3.2e-16 89.7 229 27.5
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.1e-16 88.6 235 29.8
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.6e-15 87.4 233 26.2
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.6e-15 87.4 235 31.1
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.1e-15 87.0 240 28.3
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 4.6e-15 85.9 223 32.3
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 6.0e-15 85.5 222 32.4
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 3.9e-14 82.8 221 25.8
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.9e-13 80.5 225 24.9
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 3.3e-13 79.7 228 29.8
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 4.3e-13 79.3 226 26.1
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 7.4e-13 78.6 235 26.4
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 9.7e-13 78.2 229 26.6
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 3.7e-12 76.3 229 28.4
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 4.8e-12 75.9 224 32.6
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 6.3e-12 75.5 237 24.9
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 8.2e-12 75.1 222 28.4
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 8.2e-12 75.1 228 30.3
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 1.4e-11 74.3 224 31.2
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 2.4e-11 73.6 230 26.1
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.1e-11 73.2 226 29.6
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 3.1e-11 73.2 216 26.9
Carub.0003s3296 Capsella rubella HOM05D004960 ORTHO05D004696 4.1e-11 72.8 236 30.5
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.9e-11 72.0 245 30.2
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 9.0e-11 71.6 236 25.0
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 1.5e-10 70.9 220 25.5
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.5e-10 70.9 228 25.4
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.5e-10 70.9 228 25.4
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 2.0e-10 70.5 237 26.6
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 4.5e-10 69.3 228 26.8
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 4.5e-10 69.3 225 25.8
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 4.5e-10 69.3 225 28.0
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 5.9e-10 68.9 241 27.8
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 7.7e-10 68.6 154 29.9
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 7.7e-10 68.6 232 26.7
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 1.7e-09 67.4 229 26.6
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 2.9e-09 66.6 227 27.3
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 2.9e-09 66.6 239 28.9
Migut.K00271 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.8e-09 66.2 252 25.8
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 6.5e-09 65.5 230 26.5
Cpa.g.c29666.2 Carica papaya HOM05D004960 ORTHO05D004696 8.5e-09 65.1 225 27.6
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.1e-08 64.7 223 25.6
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 1.1e-08 64.7 221 24.9
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 1.4e-08 64.3 219 27.4
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 1.4e-08 64.3 235 26.8
AT2G18690 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 1.9e-08 63.9 228 25.0
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 1.9e-08 63.9 233 25.3
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.2e-08 63.2 237 27.0
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 4.2e-08 62.8 245 26.5
PGR084G0002 Punica granatum HOM05D004960 ORTHO05D004696 4.2e-08 62.8 222 29.3
PGR142G0218 Punica granatum HOM05D004960 ORTHO05D004696 4.2e-08 62.8 222 29.3
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 5.5e-08 62.4 226 25.2
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 7.2e-08 62.0 156 28.8
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 7.2e-08 62.0 230 30.0
BcaC04g22889 Brassica carinata HOM05D004960 ORTHO05D004696 9.4e-08 61.6 229 25.8
C09p14170 Brassica napus HOM05D004960 ORTHO05D004696 9.4e-08 61.6 229 25.8
Migut.J01430 Erythranthe guttata HOM05D004960 ORTHO05D004696 1.2e-07 61.2 223 26.5
Oeu037995.1 Olea europaea HOM05D004960 ORTHO05D004696 1.2e-07 61.2 210 24.3
C03p59340 Brassica napus HOM05D004960 ORTHO05D004696 2.1e-07 60.5 230 26.5
HanXRQChr03g0068481 Helianthus annuus HOM05D004960 ORTHO05D004696 2.1e-07 60.5 228 26.8
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 2.1e-07 60.5 225 25.3
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.1e-07 60.5 244 25.8
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 3.6e-07 59.7 158 32.3
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 3.6e-07 59.7 232 25.4
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 4.6e-07 59.3 232 26.7
A09p12040 Brassica napus HOM05D004960 ORTHO05D004696 6.1e-07 58.9 229 25.3
BraA09t36847Z Brassica rapa HOM05D004960 ORTHO05D004696 6.1e-07 58.9 229 25.3
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 6.1e-07 58.9 151 30.5
BcaB03g16662 Brassica carinata HOM05D004960 ORTHO05D004696 7.9e-07 58.5 223 25.1
BolC9t54315H Brassica oleracea HOM05D004960 ORTHO05D004696 7.9e-07 58.5 229 25.3
Sp3g32170 Schrenkiella parvula HOM05D004960 ORTHO05D004696 1.0e-06 58.2 159 30.2
BcaC04g21483 Brassica carinata HOM05D004960 ORTHO05D004696 1.8e-06 57.4 228 25.4
A06p33120 Brassica napus HOM05D004960 ORTHO05D004696 1.8e-06 57.4 227 25.6
C09p31280 Brassica napus HOM05D004960 ORTHO05D004696 1.8e-06 57.4 228 25.4
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 1.8e-06 57.4 211 26.1
PSO063G2425 Papaver somniferum HOM05D004960 ORTHO05D004696 1.8e-06 57.4 207 27.5
Migut.K00270 Erythranthe guttata HOM05D004960 ORTHO05D004696 3.0e-06 56.6 153 30.1
Atru.chr12.164 Acer truncatum HOM05D004960 ORTHO05D004696 3.9e-06 56.2 139 31.7
Aqoxy7G03206 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 5.1e-06 55.8 141 30.5
CARHR109270 Cardamine hirsuta HOM05D004960 ORTHO05D004696 5.1e-06 55.8 231 23.4
C07p04050 Brassica napus HOM05D004960 ORTHO05D004696 6.7e-06 55.5 154 27.3
BolC7t40796H Brassica oleracea HOM05D004960 ORTHO05D004696 6.7e-06 55.5 154 27.3
BolC9t55984H Brassica oleracea HOM05D004960 ORTHO05D004696 6.7e-06 55.5 228 25.4
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 6.7e-06 55.5 158 27.2
Thhalv10022778m.g Eutrema salsugineum HOM05D004960 ORTHO05D004696 6.7e-06 55.5 237 28.3
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 8.8e-06 55.1 221 28.5
BraA07t27990Z Brassica rapa HOM05D004960 ORTHO05D004696 8.8e-06 55.1 228 23.7
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 8.8e-06 55.1 235 24.3


User provided reference genes

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