Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 0.0e+00 1187.9 663 100.0
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 4.0e-226 788.5 600 72.8
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.2e-174 617.5 631 56.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.0e-173 614.4 576 64.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 6.3e-163 578.6 663 53.5
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.0e-160 571.2 631 53.7
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.5e-160 568.5 631 53.6
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 6.5e-160 568.5 612 55.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.8e-157 560.5 630 52.5
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.8e-155 553.1 631 51.5
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 5.9e-153 545.4 631 52.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.3e-152 543.5 634 51.9
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 8.6e-152 541.6 634 52.4
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 4.2e-151 539.3 634 52.2
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 9.5e-151 538.1 633 52.6
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 2.1e-150 537.0 626 51.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.5e-148 530.8 634 52.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 3.1e-146 523.1 629 50.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.4e-146 522.3 626 51.4
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.7e-145 520.0 636 49.7
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.7e-145 520.0 631 49.1
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 2.7e-145 520.0 630 50.3
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 5.9e-145 518.8 626 51.3
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 2.3e-144 516.9 650 50.3
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.3e-144 516.9 630 50.0
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.8e-144 516.2 631 49.4
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 6.6e-144 515.4 634 48.7
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.1e-143 514.6 631 50.4
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.4e-141 507.7 620 51.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.0e-140 503.8 630 48.4
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 5.7e-140 502.3 627 49.6
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 1.7e-139 500.7 627 49.3
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.1e-138 498.0 645 49.8
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.1e-138 498.0 628 48.1
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.4e-138 497.7 630 48.3
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 9.2e-138 495.0 632 49.5
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.6e-137 494.2 632 49.7
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.7e-136 490.7 633 47.7
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.9e-136 489.6 631 48.3
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 2.5e-135 486.9 630 47.6
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.3e-135 486.5 631 48.2
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.1e-134 483.8 624 48.6
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.4e-133 481.1 629 48.2
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 3.1e-133 479.9 658 48.0
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 5.2e-133 479.2 626 47.6
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.2e-132 478.0 627 47.8
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 2.2e-131 473.8 627 47.4
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.4e-130 471.1 658 47.3
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.4e-130 470.3 627 47.8
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 2.4e-130 470.3 630 46.8
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 2.7e-129 466.8 631 47.4
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.5e-129 466.5 626 47.9
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 3.5e-129 466.5 617 47.0
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 1.0e-128 464.9 629 46.4
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 6.6e-128 462.2 635 49.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 8.6e-128 461.8 624 47.0
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.5e-127 460.3 618 47.4
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.3e-127 459.9 689 43.5
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.1e-126 457.2 623 46.2
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 2.8e-126 456.8 623 49.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 4.7e-126 456.1 627 46.3
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 8.9e-125 451.8 628 47.1
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.2e-124 451.4 636 46.9
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 2.0e-124 450.7 623 45.7
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.0e-124 450.7 628 47.0
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 2.6e-124 450.3 625 45.9
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 5.8e-124 449.1 617 48.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 1.7e-123 447.6 621 46.4
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.9e-123 446.8 617 48.6
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 9.2e-122 441.8 627 45.6
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 2.7e-121 440.3 617 48.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.3e-120 438.0 641 47.4
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.1e-117 428.3 641 47.3
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 2.4e-117 427.2 737 40.6
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 2.9e-115 420.2 621 44.4
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 3.8e-115 419.9 771 38.4
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 2.4e-114 417.2 637 43.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.2e-113 414.8 618 45.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 7.8e-113 412.1 505 48.3
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 9.6e-111 405.2 553 47.7
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.1e-109 400.2 522 48.3
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 7.6e-108 395.6 503 46.3
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 7.1e-106 389.0 634 41.8
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 2.6e-100 370.5 428 51.2
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 8.4e-99 365.5 634 39.4
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 5.4e-98 362.8 406 51.5
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 9.3e-98 362.1 428 49.8
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 5.6e-95 352.8 512 44.9
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 4.0e-93 346.7 456 45.8
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 7.6e-92 342.4 523 44.4
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 6.4e-91 339.3 630 38.1
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.3e-88 330.9 639 36.5
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.1e-87 328.6 612 40.2
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.8e-85 321.2 686 34.7
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.5e-84 318.2 643 36.2
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.5e-79 301.6 449 43.0
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 7.4e-79 299.3 626 35.6
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.2e-78 297.7 570 37.2
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.5e-76 291.6 659 34.1
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.3e-75 288.5 463 44.9
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 2.3e-72 277.7 626 34.0
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.4e-69 267.7 633 33.5
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 3.3e-55 220.7 668 30.1
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 8.5e-51 206.1 399 42.9
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 8.5e-51 206.1 361 44.0
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 2.2e-46 191.4 266 48.1
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 3.0e-40 171.0 756 25.5
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.2e-40 170.2 162 56.2
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 5.5e-34 150.2 157 55.4
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 3.6e-33 147.5 720 25.6
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 8.3e-30 136.3 199 43.7
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.4e-29 134.8 100 73.0
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 1.6e-28 132.1 161 47.8
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.0e-27 129.4 168 45.2
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.1e-25 121.7 190 42.1
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 2.8e-25 121.3 344 31.7
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 6.4e-22 110.2 97 64.9
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.0e-12 77.0 49 79.6
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-11 75.9 48 79.2
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.3e-10 71.2 47 72.3
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 3.3e-10 71.2 48 72.9
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.3e-10 70.9 48 79.2
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.8e-08 65.5 90 42.2
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.5e-07 62.4 100 37.0
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 5.8e-07 60.5 135 36.3
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.2e-06 58.5 43 72.1


User provided reference genes

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