Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.9e-77 292.7 186 100.0
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 6.5e-57 224.6 163 87.7
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 5.5e-56 221.5 172 82.6
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 6.3e-52 208.0 118 93.2
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 1.8e-46 189.9 140 74.3
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.3e-44 183.7 168 74.4
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 2.8e-44 182.6 130 77.7
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 6.3e-44 181.4 130 76.9
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.1e-43 180.6 130 76.9
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 1.8e-43 179.9 138 73.2
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 5.3e-43 178.3 138 76.1
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 7.0e-43 177.9 144 72.2
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 7.0e-43 177.9 171 70.2
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.6e-42 176.8 130 76.2
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.6e-42 176.8 130 76.2
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.6e-42 176.8 130 76.2
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 2.6e-42 176.0 172 69.2
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.2e-41 172.9 135 74.1
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 5.5e-40 168.3 163 66.3
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.4e-38 163.7 130 71.5
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 5.2e-38 161.8 140 68.6
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 8.8e-38 161.0 165 66.1
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 1.5e-37 160.2 142 65.5
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.0e-37 159.8 97 85.6
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.0e-37 159.8 133 69.9
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.6e-37 159.5 137 68.6
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.6e-37 159.5 168 64.3
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 4.4e-37 158.7 169 66.9
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 7.5e-37 157.9 169 66.9
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 9.7e-37 157.5 109 76.1
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 9.7e-37 157.5 134 65.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 9.7e-37 157.5 137 67.2
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 9.7e-37 157.5 137 67.2
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-36 157.1 134 67.2
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 1.7e-36 156.8 129 66.7
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.7e-36 156.8 136 67.6
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 3.7e-36 155.6 136 64.7
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.8e-36 155.2 123 70.7
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 4.8e-36 155.2 123 70.7
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 4.8e-36 155.2 132 66.7
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 4.8e-36 155.2 127 77.2
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 4.8e-36 155.2 137 68.6
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 8.3e-36 154.5 132 66.7
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 8.3e-36 154.5 131 67.2
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.1e-35 154.1 131 67.9
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.1e-35 154.1 136 64.7
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.4e-35 153.7 132 66.7
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.4e-35 153.7 132 66.7
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.4e-35 153.7 100 77.0
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.8e-35 153.3 135 63.7
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 1.8e-35 153.3 122 68.9
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.3e-35 151.8 129 67.4
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 9.1e-35 151.0 135 64.4
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 9.1e-35 151.0 216 53.7
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.6e-34 150.2 104 76.9
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.0e-34 149.8 116 70.7
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.0e-34 149.8 124 68.5
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.5e-34 149.1 118 69.5
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 3.5e-34 149.1 132 65.9
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 4.5e-34 148.7 135 63.0
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 5.9e-34 148.3 125 68.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 1.0e-33 147.5 125 62.4
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.3e-33 147.1 123 69.1
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 1.7e-33 146.7 137 59.9
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 2.2e-33 146.4 126 65.1
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 2.9e-33 146.0 118 68.6
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 2.9e-33 146.0 124 62.1
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 2.9e-33 146.0 135 63.0
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 6.5e-33 144.8 124 62.9
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 6.5e-33 144.8 130 64.6
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 6.5e-33 144.8 118 66.9
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 8.5e-33 144.4 157 65.0
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.1e-32 144.1 132 61.4
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.9e-32 143.3 117 66.7
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 2.5e-32 142.9 124 65.3
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 3.2e-32 142.5 121 62.0
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 5.5e-32 141.7 86 83.7
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 1.2e-31 140.6 113 69.9
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 1.6e-31 140.2 190 55.3
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 2.1e-31 139.8 138 62.3
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 2.1e-31 139.8 118 66.1
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.1e-31 139.8 118 66.1
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.1e-31 139.8 118 66.1
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.7e-31 139.4 133 57.9
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 3.6e-31 139.0 133 57.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 3.6e-31 139.0 133 57.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 3.6e-31 139.0 133 57.1
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.0e-30 137.5 128 57.0
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.0e-30 137.5 86 82.6
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 1.0e-30 137.5 144 56.9
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 1.4e-30 137.1 188 48.4
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.3e-30 136.3 128 59.4
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 4.0e-30 135.6 130 59.2
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 8.8e-30 134.4 129 61.2
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.4e-29 132.5 128 57.8
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 3.4e-29 132.5 123 60.2
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 5.7e-29 131.7 82 82.9
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 7.5e-29 131.3 91 71.4
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 7.5e-29 131.3 91 71.4
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 9.8e-29 131.0 184 52.7
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 1.3e-28 130.6 99 70.7
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.7e-28 130.2 137 58.4
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 6.3e-28 128.3 121 58.7
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.1e-27 127.5 114 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 3.1e-27 125.9 111 63.1
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.2e-26 124.0 135 57.0
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 1.6e-26 123.6 142 56.3
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 2.0e-26 123.2 198 51.0
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 2.0e-26 123.2 76 80.3
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 3.5e-26 122.5 138 58.7
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 4.5e-26 122.1 76 80.3
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 5.9e-26 121.7 129 55.8
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.3e-25 120.6 79 74.7
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 1.1e-24 117.5 138 51.4
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 8.0e-23 111.3 75 77.3
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.0e-22 110.9 88 69.3
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 4.0e-22 109.0 123 53.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 5.7e-21 105.1 101 58.4
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 6.3e-20 101.7 93 61.3
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 2.0e-18 96.7 90 55.6
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.7e-18 96.3 90 61.1
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.3e-17 93.2 219 34.2
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 5.0e-17 92.0 91 59.3
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 2.3e-14 83.2 163 48.5
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 4.0e-14 82.4 82 56.1
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 6.4e-12 75.1 78 74.4
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.6e-10 70.5 79 54.4
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 3.5e-10 69.3 85 49.4
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.0e-09 67.8 85 52.9
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 1.1e-08 64.3 53 64.2
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 2.3e-06 56.6 119 34.5
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 6.8e-06 55.1 42 61.9


User provided reference genes

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