Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 2.1e-52 208.8 105 100.0
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 1.6e-49 199.1 105 94.3
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 6.9e-48 193.7 103 93.2
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 7.9e-44 180.3 105 85.7
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 1.8e-43 179.1 105 84.8
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.8e-43 176.8 104 84.6
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.1e-42 176.4 105 84.8
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 2.0e-42 175.6 105 84.8
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 2.0e-42 175.6 106 85.8
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.5e-42 175.3 105 84.8
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 4.3e-42 174.5 103 82.5
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 9.7e-42 173.3 105 83.8
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 9.7e-42 173.3 105 82.9
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 9.7e-42 173.3 105 82.9
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 1.3e-41 172.9 105 83.8
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 1.3e-41 172.9 105 83.8
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.7e-41 172.6 105 81.0
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 1.7e-41 172.6 99 86.9
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 1.7e-41 172.6 105 83.8
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 2.2e-41 172.2 105 81.0
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 2.2e-41 172.2 105 81.9
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 2.2e-41 172.2 105 83.8
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 3.7e-41 171.4 105 83.8
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-40 169.9 104 79.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 2.4e-40 168.7 103 83.5
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 3.1e-40 168.3 105 81.9
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 9.1e-40 166.8 103 78.6
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.2e-39 166.4 104 76.9
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 1.2e-39 166.4 105 77.1
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 2.0e-39 165.6 104 77.9
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 2.6e-39 165.2 103 80.6
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 7.7e-39 163.7 103 80.6
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 1.0e-38 163.3 97 84.5
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.7e-38 162.5 105 80.0
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 1.7e-38 162.5 97 83.5
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.2e-38 162.2 99 81.8
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 6.5e-38 160.6 99 81.8
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 8.5e-38 160.2 100 82.0
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-37 159.8 99 79.8
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 1.4e-37 159.5 103 78.6
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 1.4e-37 159.5 103 77.7
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.4e-37 159.5 92 88.0
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.9e-37 159.1 94 84.0
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 1.9e-37 159.1 105 76.2
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 2.5e-37 158.7 104 75.0
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 3.2e-37 158.3 104 73.1
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 4.2e-37 157.9 99 78.8
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 4.2e-37 157.9 105 74.3
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 5.5e-37 157.5 105 75.2
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 9.4e-37 156.8 95 85.3
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.6e-36 156.0 105 74.3
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.6e-36 156.0 101 76.2
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 2.7e-36 155.2 99 76.8
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 4.7e-36 154.5 99 76.8
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 6.1e-36 154.1 105 72.4
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 1.0e-35 153.3 105 74.3
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.4e-35 152.9 99 76.8
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 3.0e-35 151.8 105 72.4
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 3.9e-35 151.4 105 75.2
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 5.1e-35 151.0 103 73.8
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 8.8e-35 150.2 94 78.7
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 8.8e-35 150.2 97 76.3
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 4.4e-34 147.9 103 74.8
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 9.7e-34 146.7 95 73.7
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 1.7e-33 146.0 105 68.6
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 2.8e-33 145.2 92 78.3
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 4.8e-33 144.4 92 78.3
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 6.3e-33 144.1 97 73.2
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 1.4e-32 142.9 105 68.6
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 1.8e-32 142.5 92 77.2
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.8e-32 142.5 92 78.3
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 3.1e-32 141.7 90 78.9
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 4.1e-32 141.4 99 68.7
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 4.1e-32 141.4 89 76.4
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 9.1e-32 140.2 92 75.0
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.2e-31 139.8 91 79.1
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 2.0e-31 139.0 103 72.8
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 4.5e-31 137.9 101 68.3
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.7e-30 136.0 92 72.8
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-30 136.0 90 74.4
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-30 136.0 90 74.4
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-30 135.2 92 72.8
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 3.8e-30 134.8 91 75.8
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 5.0e-30 134.4 92 72.8
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 5.0e-30 134.4 76 90.8
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 1.9e-29 132.5 76 89.5
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 3.2e-29 131.7 92 70.7
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 3.2e-29 131.7 90 72.2
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 3.2e-29 131.7 91 70.3
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 4.2e-29 131.3 90 72.2
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.0e-27 126.7 90 67.8
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 6.7e-27 124.0 99 63.6
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 7.5e-26 120.6 76 77.6
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 9.7e-26 120.2 75 80.0
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 2.8e-25 118.6 76 76.3
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 4.8e-25 117.9 76 76.3
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 1.1e-24 116.7 80 73.8
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 4.1e-24 114.8 74 75.7
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 7.0e-24 114.0 90 67.8
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 1.2e-23 113.2 74 74.3
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 1.6e-23 112.8 79 70.9
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.0e-22 110.2 100 60.0
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.0e-22 110.2 75 76.0
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 2.9e-22 108.6 64 81.2
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 3.2e-21 105.1 92 64.1
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.6e-20 102.8 78 67.9
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 3.4e-18 95.1 64 78.1
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 4.4e-18 94.7 73 64.4
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 2.4e-16 89.0 90 53.3
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.2e-15 86.7 62 74.2
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 5.9e-15 84.3 98 52.0
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.0e-14 83.6 75 58.7
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 1.3e-14 83.2 86 50.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 8.5e-14 80.5 87 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.5e-13 79.7 78 50.0
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 1.2e-12 76.6 52 73.1
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 4.7e-12 74.7 86 51.2
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 6.6e-06 54.3 37 67.6


User provided reference genes

Program Settings