Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 2.4e-289 998.0 475 100.0
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 2.1e-253 878.6 482 86.3
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 4.9e-250 867.5 473 86.9
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 4.7e-237 824.3 483 80.3
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.2e-235 819.7 488 77.9
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.7e-234 815.8 495 76.8
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 2.2e-234 815.5 479 79.3
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 4.9e-234 814.3 495 76.6
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 3.5e-232 808.1 475 79.6
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 2.3e-231 805.4 491 77.0
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 3.9e-231 804.7 491 76.6
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 8.6e-231 803.5 484 78.1
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 2.5e-230 802.0 491 76.8
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 1.2e-229 799.7 482 77.0
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 2.8e-229 798.5 482 76.8
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.8e-228 795.8 477 77.1
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 4.0e-228 794.7 478 76.6
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 6.8e-228 793.9 480 77.3
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.2e-227 793.1 478 76.4
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.5e-227 792.7 478 76.6
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.6e-227 792.0 478 76.4
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 3.4e-227 791.6 479 77.2
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.4e-227 791.6 476 79.0
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 3.4e-227 791.6 486 75.9
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 4.4e-227 791.2 486 75.3
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 4.4e-227 791.2 483 77.4
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 7.6e-227 790.4 486 76.7
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 9.9e-227 790.0 480 76.9
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 1.3e-226 789.6 482 76.1
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.7e-226 789.3 478 76.4
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 2.2e-226 788.9 478 75.9
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 2.2e-226 788.9 483 75.8
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 4.9e-226 787.7 479 76.8
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.1e-225 786.6 518 72.2
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.4e-225 786.2 490 75.5
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 3.2e-225 785.0 479 77.2
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 3.2e-225 785.0 475 76.2
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 5.4e-225 784.3 486 75.3
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.1e-225 783.9 476 77.1
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 9.3e-225 783.5 486 75.5
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.2e-224 783.1 478 75.9
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 6.0e-224 780.8 484 76.7
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 3.9e-223 778.1 482 75.3
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 3.9e-223 778.1 490 74.9
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 5.1e-223 777.7 572 67.1
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 6.6e-223 777.3 486 73.7
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.9e-222 775.8 484 75.8
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.3e-221 773.1 486 73.3
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.6e-221 772.7 485 75.9
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 1.6e-221 772.7 477 74.8
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 4.8e-221 771.2 478 74.5
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.4e-220 769.6 485 74.0
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.4e-220 769.6 483 74.5
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 5.3e-220 767.7 480 74.8
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 6.9e-220 767.3 484 75.0
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 2.0e-219 765.8 483 75.4
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 2.6e-219 765.4 484 74.6
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.5e-219 764.6 497 72.8
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 7.6e-219 763.8 484 74.4
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.3e-218 763.1 485 73.8
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 4.9e-218 761.1 483 74.9
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 4.9e-218 761.1 477 74.4
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.1e-217 760.0 483 73.7
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 1.1e-217 760.0 573 65.4
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 2.4e-217 758.8 480 74.4
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 3.2e-217 758.4 509 71.9
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 4.2e-217 758.1 488 74.8
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 1.2e-216 756.5 480 73.8
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 2.7e-216 755.4 480 73.3
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 4.6e-216 754.6 485 73.2
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 1.0e-215 753.4 481 73.6
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.0e-215 753.4 467 73.7
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 3.9e-215 751.5 488 73.2
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 6.6e-215 750.7 479 73.1
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.1e-214 750.0 457 75.7
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 9.6e-214 746.9 476 72.7
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.3e-213 746.5 476 72.7
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.6e-213 746.1 487 72.7
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 2.8e-213 745.3 480 72.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 2.8e-213 745.3 478 71.8
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 1.1e-212 743.4 560 65.0
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 1.4e-212 743.0 478 71.5
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.8e-212 742.7 476 72.1
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.8e-212 742.7 476 72.1
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 3.1e-212 741.9 475 72.0
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 6.9e-212 740.7 478 71.5
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 9.0e-212 740.3 478 71.5
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.2e-211 740.0 457 74.6
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 2.0e-211 739.2 487 71.9
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.0e-211 739.2 478 72.0
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 3.4e-211 738.4 475 70.9
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 4.5e-211 738.0 475 71.6
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 2.1e-208 729.2 478 71.1
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 3.5e-208 728.4 499 68.5
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 7.9e-208 727.2 481 69.2
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 2.3e-207 725.7 477 73.6
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.8e-205 718.8 567 62.4
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.1e-204 716.8 540 65.2
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.2e-202 709.1 592 59.8
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 2.5e-198 695.7 411 78.8
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 2.8e-197 692.2 485 68.0
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 2.4e-196 689.1 499 66.3
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 9.0e-196 687.2 411 77.4
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 3.2e-193 678.7 476 67.4
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.8e-191 672.9 444 72.5
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.0e-183 647.1 423 71.4
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 4.1e-180 635.2 410 71.5
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.5e-179 633.3 475 62.3
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.4e-177 626.7 493 60.0
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 1.4e-175 620.2 480 61.9
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 6.3e-173 611.3 374 75.7
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.8e-170 602.1 373 72.7
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 7.2e-169 597.8 373 72.4
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 6.7e-167 591.3 358 77.4
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 2.0e-158 563.1 342 76.6
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.7e-157 558.9 327 80.4
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.3e-154 550.4 481 54.3
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.7e-154 550.1 327 78.6
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 2.9e-154 549.3 327 79.2
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 2.8e-149 532.7 327 78.0
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 1.2e-144 517.3 323 75.2
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-144 517.3 332 74.1
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 2.6e-142 509.6 357 68.1
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.4e-140 503.8 362 68.5
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.4e-134 482.3 296 74.3
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 5.0e-130 468.8 326 69.6
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 1.2e-107 394.4 441 45.1
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 3.2e-100 369.8 380 47.1
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.5e-99 366.3 222 73.4
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 3.8e-93 346.3 423 44.2
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 2.3e-90 337.0 224 68.8
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 4.3e-89 332.8 211 76.3
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-76 291.6 159 83.6
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-76 291.6 159 83.6
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.1e-74 282.7 159 82.4
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.3e-73 280.0 187 73.3
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 3.6e-67 260.0 145 80.7
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 5.9e-62 242.7 424 35.4
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 7.7e-46 189.1 106 84.0
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.5e-44 183.0 106 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 1.8e-42 177.9 135 57.0
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.2e-42 176.4 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 6.8e-42 176.0 93 88.2
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 1.1e-36 158.7 119 65.5
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 9.5e-36 155.6 91 76.9
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 1.7e-21 108.2 87 59.8
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 7.3e-20 102.8 77 55.8
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.8e-18 98.2 76 63.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.9e-15 88.2 70 60.0
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.6e-14 83.6 65 49.2
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 2.3e-13 81.3 69 59.4
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 4.9e-08 63.5 34 73.5
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 1.1e-07 62.4 194 32.0


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